{"id":"https://openalex.org/W3069142720","doi":"https://doi.org/10.1093/bioinformatics/btaa732","title":"ipDMR: identification of differentially methylated regions with interval <i>P</i>-values","display_name":"ipDMR: identification of differentially methylated regions with interval <i>P</i>-values","publication_year":2020,"publication_date":"2020-08-12","ids":{"openalex":"https://openalex.org/W3069142720","doi":"https://doi.org/10.1093/bioinformatics/btaa732","mag":"3069142720","pmid":"https://pubmed.ncbi.nlm.nih.gov/32805005"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btaa732","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa732","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/37/5/711/37808664/btaa732.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/37/5/711/37808664/btaa732.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5075573311","display_name":"Zongli Xu","orcid":"https://orcid.org/0000-0002-9034-8902"},"institutions":[{"id":"https://openalex.org/I4210095140","display_name":"National Institute of Environmental Health Sciences","ror":"https://ror.org/00j4k1h63","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210095140"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Zongli Xu","raw_affiliation_strings":["Epidemiology Branch, National Institute of Environmental Health Sciences, NIH , Research Triangle Park, NC 27709, USA"],"affiliations":[{"raw_affiliation_string":"Epidemiology Branch, National Institute of Environmental Health Sciences, NIH , Research Triangle Park, NC 27709, USA","institution_ids":["https://openalex.org/I4210095140"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101647373","display_name":"Changchun Xie","orcid":"https://orcid.org/0000-0002-1843-4099"},"institutions":[{"id":"https://openalex.org/I63135867","display_name":"University of Cincinnati","ror":"https://ror.org/01e3m7079","country_code":"US","type":"education","lineage":["https://openalex.org/I63135867"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Changchun Xie","raw_affiliation_strings":["Division of Biostatistics and Bioinformatics, Department of Environmental and Public Health Sciences, College of Medicine, University of Cincinnati , Cincinnati, OH 45267, USA"],"affiliations":[{"raw_affiliation_string":"Division of Biostatistics and Bioinformatics, Department of Environmental and Public Health Sciences, College of Medicine, University of Cincinnati , Cincinnati, OH 45267, USA","institution_ids":["https://openalex.org/I63135867"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024312010","display_name":"Jack A. Taylor","orcid":"https://orcid.org/0000-0001-5303-6398"},"institutions":[{"id":"https://openalex.org/I4210095140","display_name":"National Institute of Environmental Health Sciences","ror":"https://ror.org/00j4k1h63","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210095140"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Jack A Taylor","raw_affiliation_strings":["Epidemiology Branch, National Institute of Environmental Health Sciences, NIH , Research Triangle Park, NC 27709, USA","Epigenetic and Stem Cell Biology Laboratory, National Institute of Environmental Health Sciences, NIH , Research Triangle Park, NC 27709, USA"],"affiliations":[{"raw_affiliation_string":"Epidemiology Branch, National Institute of Environmental Health Sciences, NIH , Research Triangle Park, NC 27709, USA","institution_ids":["https://openalex.org/I4210095140"]},{"raw_affiliation_string":"Epigenetic and Stem Cell Biology Laboratory, National Institute of Environmental Health Sciences, NIH , Research Triangle Park, NC 27709, USA","institution_ids":["https://openalex.org/I4210095140"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5075354948","display_name":"Liang Niu","orcid":"https://orcid.org/0000-0002-2473-9745"},"institutions":[{"id":"https://openalex.org/I63135867","display_name":"University of Cincinnati","ror":"https://ror.org/01e3m7079","country_code":"US","type":"education","lineage":["https://openalex.org/I63135867"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Liang Niu","raw_affiliation_strings":["Division of Biostatistics and Bioinformatics, Department of Environmental and Public Health Sciences, College of Medicine, University of Cincinnati , Cincinnati, OH 45267, USA"],"affiliations":[{"raw_affiliation_string":"Division of Biostatistics and Bioinformatics, Department of Environmental and Public Health Sciences, College of Medicine, University of Cincinnati , Cincinnati, OH 45267, USA","institution_ids":["https://openalex.org/I63135867"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5024312010","https://openalex.org/A5075354948"],"corresponding_institution_ids":["https://openalex.org/I4210095140","https://openalex.org/I63135867"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":5.029,"has_fulltext":true,"cited_by_count":60,"citation_normalized_percentile":{"value":0.96135875,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":100},"biblio":{"volume":"37","issue":"5","first_page":"711","last_page":"713"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10201","display_name":"Speech Recognition and Synthesis","score":0.9532999992370605,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10201","display_name":"Speech Recognition and Synthesis","score":0.9532999992370605,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10812","display_name":"Human Pose and Action Recognition","score":0.9010000228881836,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.8212144374847412},{"id":"https://openalex.org/keywords/interval","display_name":"Interval (graph theory)","score":0.6977509260177612},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.505420446395874},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4128473103046417},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3788728415966034},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.22863700985908508},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.19512802362442017},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.04575178027153015}],"concepts":[{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.8212144374847412},{"id":"https://openalex.org/C2778067643","wikidata":"https://www.wikidata.org/wiki/Q166507","display_name":"Interval (graph theory)","level":2,"score":0.6977509260177612},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.505420446395874},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4128473103046417},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3788728415966034},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.22863700985908508},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.19512802362442017},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.04575178027153015}],"mesh":[{"descriptor_ui":"D000081122","descriptor_name":"Epigenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000081122","descriptor_name":"Epigenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000081122","descriptor_name":"Epigenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000081122","descriptor_name":"Epigenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btaa732","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa732","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/37/5/711/37808664/btaa732.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:32805005","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/32805005","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8248314","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8248314","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btaa732","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa732","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/37/5/711/37808664/btaa732.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2807712956","display_name":null,"funder_award_id":"Z01 ES044005","funder_id":"https://openalex.org/F4320337361","funder_display_name":"National Institute of Environmental Health Sciences"},{"id":"https://openalex.org/G5689137279","display_name":null,"funder_award_id":"Z01 ES049032","funder_id":"https://openalex.org/F4320337361","funder_display_name":"National Institute of Environmental Health Sciences"},{"id":"https://openalex.org/G6623899499","display_name":null,"funder_award_id":"Z01 ES044005","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7730867842","display_name":null,"funder_award_id":"Z01 ES049033","funder_id":"https://openalex.org/F4320337361","funder_display_name":"National Institute of Environmental Health Sciences"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337361","display_name":"National Institute of Environmental Health Sciences","ror":"https://ror.org/00j4k1h63"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3069142720.pdf","grobid_xml":"https://content.openalex.org/works/W3069142720.grobid-xml"},"referenced_works_count":9,"referenced_works":["https://openalex.org/W1964278453","https://openalex.org/W2123929789","https://openalex.org/W2129958809","https://openalex.org/W2130752875","https://openalex.org/W2163327652","https://openalex.org/W2889571716","https://openalex.org/W2891923099","https://openalex.org/W2939678336","https://openalex.org/W3011777860"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2082860237","https://openalex.org/W2119695867","https://openalex.org/W2130076355","https://openalex.org/W1990804418","https://openalex.org/W1993764875","https://openalex.org/W2046158694","https://openalex.org/W2788277189","https://openalex.org/W2013243191","https://openalex.org/W2921201112"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":9},{"year":2024,"cited_by_count":15},{"year":2023,"cited_by_count":13},{"year":2022,"cited_by_count":16},{"year":2021,"cited_by_count":4}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2020-08-24T00:00:00"}
