{"id":"https://openalex.org/W3047705148","doi":"https://doi.org/10.1093/bioinformatics/btaa702","title":"iCarPS: a computational tool for identifying protein carbonylation sites by novel encoded features","display_name":"iCarPS: a computational tool for identifying protein carbonylation sites by novel encoded features","publication_year":2020,"publication_date":"2020-08-04","ids":{"openalex":"https://openalex.org/W3047705148","doi":"https://doi.org/10.1093/bioinformatics/btaa702","mag":"3047705148","pmid":"https://pubmed.ncbi.nlm.nih.gov/32766811"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btaa702","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa702","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/37/2/171/37174647/btaa702.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/37/2/171/37174647/btaa702.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100456008","display_name":"Dan Zhang","orcid":"https://orcid.org/0000-0002-0520-7655"},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Dan Zhang","raw_affiliation_strings":["School of Life Science and Technology and Center for Informational Biology, University of Electronic Science and Technology of China , Chengdu 610054, China"],"affiliations":[{"raw_affiliation_string":"School of Life Science and Technology and Center for Informational Biology, University of Electronic Science and Technology of China , Chengdu 610054, China","institution_ids":["https://openalex.org/I150229711"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018722475","display_name":"Zhaochun Xu","orcid":"https://orcid.org/0000-0003-1799-5529"},"institutions":[{"id":"https://openalex.org/I105991555","display_name":"Jingdezhen Ceramic Institute","ror":"https://ror.org/01d0jcz74","country_code":"CN","type":"education","lineage":["https://openalex.org/I105991555"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhao-Chun Xu","raw_affiliation_strings":["Jingdezhen Ceramic Institute Computer Department, , Jingdezhen 333403, China"],"affiliations":[{"raw_affiliation_string":"Jingdezhen Ceramic Institute Computer Department, , Jingdezhen 333403, China","institution_ids":["https://openalex.org/I105991555"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051695999","display_name":"Wei Su","orcid":"https://orcid.org/0000-0001-6818-0149"},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wei Su","raw_affiliation_strings":["School of Life Science and Technology and Center for Informational Biology, University of Electronic Science and Technology of China , Chengdu 610054, China"],"affiliations":[{"raw_affiliation_string":"School of Life Science and Technology and Center for Informational Biology, University of Electronic Science and Technology of China , Chengdu 610054, China","institution_ids":["https://openalex.org/I150229711"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070885025","display_name":"Yuhe R. Yang","orcid":"https://orcid.org/0000-0003-2321-4653"},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yu-He Yang","raw_affiliation_strings":["School of Life Science and Technology and Center for Informational Biology, University of Electronic Science and Technology of China , Chengdu 610054, China"],"affiliations":[{"raw_affiliation_string":"School of Life Science and Technology and Center for Informational Biology, University of Electronic Science and Technology of China , Chengdu 610054, China","institution_ids":["https://openalex.org/I150229711"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025728076","display_name":"Hao Lv","orcid":"https://orcid.org/0000-0002-7580-0155"},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hao Lv","raw_affiliation_strings":["School of Life Science and Technology and Center for Informational Biology, University of Electronic Science and Technology of China , Chengdu 610054, China"],"affiliations":[{"raw_affiliation_string":"School of Life Science and Technology and Center for Informational Biology, University of Electronic Science and Technology of China , Chengdu 610054, China","institution_ids":["https://openalex.org/I150229711"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101757183","display_name":"Hui Yang","orcid":"https://orcid.org/0000-0001-7122-1212"},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hui Yang","raw_affiliation_strings":["School of Life Science and Technology and Center for Informational Biology, University of Electronic Science and Technology of China , Chengdu 610054, China"],"affiliations":[{"raw_affiliation_string":"School of Life Science and Technology and Center for Informational Biology, University of Electronic Science and Technology of China , Chengdu 610054, China","institution_ids":["https://openalex.org/I150229711"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5041539298","display_name":"Hao Lin","orcid":"https://orcid.org/0000-0001-6265-2862"},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Hao Lin","raw_affiliation_strings":["School of Life Science and Technology and Center for Informational Biology, University of Electronic Science and Technology of China , Chengdu 610054, China"],"affiliations":[{"raw_affiliation_string":"School of Life Science and Technology and Center for Informational Biology, University of Electronic Science and Technology of China , Chengdu 610054, China","institution_ids":["https://openalex.org/I150229711"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5041539298"],"corresponding_institution_ids":["https://openalex.org/I150229711"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":5.3853,"has_fulltext":true,"cited_by_count":91,"citation_normalized_percentile":{"value":0.96929488,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"37","issue":"2","first_page":"171","last_page":"177"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11561","display_name":"Protein Hydrolysis and Bioactive Peptides","score":0.9927999973297119,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9837999939918518,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/protein-carbonylation","display_name":"Protein Carbonylation","score":0.8444372415542603},{"id":"https://openalex.org/keywords/carbonylation","display_name":"Carbonylation","score":0.8427497148513794},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6775648593902588},{"id":"https://openalex.org/keywords/robustness","display_name":"Robustness (evolution)","score":0.6202678680419922},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5266920328140259},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.4930736720561981},{"id":"https://openalex.org/keywords/protein-sequencing","display_name":"Protein sequencing","score":0.4515650272369385},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.39620277285575867},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3488519787788391},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.33797258138656616},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.32562023401260376},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.2030903697013855},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.15961945056915283},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.14545202255249023},{"id":"https://openalex.org/keywords/oxidative-stress","display_name":"Oxidative stress","score":0.13535457849502563},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.10948410630226135},{"id":"https://openalex.org/keywords/oxidative-damage","display_name":"Oxidative damage","score":0.08548489212989807}],"concepts":[{"id":"https://openalex.org/C2911203004","wikidata":"https://www.wikidata.org/wiki/Q105409450","display_name":"Protein Carbonylation","level":4,"score":0.8444372415542603},{"id":"https://openalex.org/C168382676","wikidata":"https://www.wikidata.org/wiki/Q900377","display_name":"Carbonylation","level":4,"score":0.8427497148513794},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6775648593902588},{"id":"https://openalex.org/C63479239","wikidata":"https://www.wikidata.org/wiki/Q7353546","display_name":"Robustness (evolution)","level":3,"score":0.6202678680419922},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5266920328140259},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.4930736720561981},{"id":"https://openalex.org/C10010492","wikidata":"https://www.wikidata.org/wiki/Q3142557","display_name":"Protein sequencing","level":4,"score":0.4515650272369385},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.39620277285575867},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3488519787788391},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.33797258138656616},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.32562023401260376},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.2030903697013855},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.15961945056915283},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.14545202255249023},{"id":"https://openalex.org/C2776151105","wikidata":"https://www.wikidata.org/wiki/Q898814","display_name":"Oxidative stress","level":2,"score":0.13535457849502563},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.10948410630226135},{"id":"https://openalex.org/C3020296196","wikidata":"https://www.wikidata.org/wiki/Q898814","display_name":"Oxidative damage","level":3,"score":0.08548489212989807},{"id":"https://openalex.org/C512735826","wikidata":"https://www.wikidata.org/wiki/Q2025","display_name":"Carbon monoxide","level":3,"score":0.0},{"id":"https://openalex.org/C161790260","wikidata":"https://www.wikidata.org/wiki/Q82264","display_name":"Catalysis","level":2,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D011499","descriptor_name":"Protein Processing, Post-Translational","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011499","descriptor_name":"Protein Processing, Post-Translational","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011499","descriptor_name":"Protein Processing, Post-Translational","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D018384","descriptor_name":"Oxidative Stress","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018384","descriptor_name":"Oxidative Stress","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018384","descriptor_name":"Oxidative Stress","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D050050","descriptor_name":"Protein Carbonylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D050050","descriptor_name":"Protein Carbonylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D050050","descriptor_name":"Protein Carbonylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btaa702","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa702","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/37/2/171/37174647/btaa702.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:32766811","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/32766811","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btaa702","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa702","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/37/2/171/37174647/btaa702.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1739709948","display_name":null,"funder_award_id":"61772119","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320323292","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3047705148.pdf","grobid_xml":"https://content.openalex.org/works/W3047705148.grobid-xml"},"referenced_works_count":45,"referenced_works":["https://openalex.org/W176721219","https://openalex.org/W1597763516","https://openalex.org/W1975275346","https://openalex.org/W1975379800","https://openalex.org/W1990125034","https://openalex.org/W1993839684","https://openalex.org/W1994431202","https://openalex.org/W2029499676","https://openalex.org/W2060924904","https://openalex.org/W2068618715","https://openalex.org/W2073820263","https://openalex.org/W2077200345","https://openalex.org/W2086561195","https://openalex.org/W2094509624","https://openalex.org/W2097606916","https://openalex.org/W2111173790","https://openalex.org/W2134724878","https://openalex.org/W2135893370","https://openalex.org/W2141818629","https://openalex.org/W2152365098","https://openalex.org/W2157825442","https://openalex.org/W2168012258","https://openalex.org/W2254740876","https://openalex.org/W2345938495","https://openalex.org/W2424628474","https://openalex.org/W2475018897","https://openalex.org/W2528970029","https://openalex.org/W2549265723","https://openalex.org/W2591620035","https://openalex.org/W2603443522","https://openalex.org/W2775998237","https://openalex.org/W2805110914","https://openalex.org/W2806931818","https://openalex.org/W2900891475","https://openalex.org/W2905629607","https://openalex.org/W2911964244","https://openalex.org/W2923490814","https://openalex.org/W2942801317","https://openalex.org/W2967387109","https://openalex.org/W2981242070","https://openalex.org/W2999580270","https://openalex.org/W3003008175","https://openalex.org/W3009820544","https://openalex.org/W6607268666","https://openalex.org/W6720388510"],"related_works":["https://openalex.org/W4285234816","https://openalex.org/W1990125034","https://openalex.org/W3209942255","https://openalex.org/W2460513225","https://openalex.org/W2619128443","https://openalex.org/W2031235464","https://openalex.org/W2808898301","https://openalex.org/W4387077146","https://openalex.org/W1895994104","https://openalex.org/W1980291487"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":17},{"year":2024,"cited_by_count":9},{"year":2023,"cited_by_count":9},{"year":2022,"cited_by_count":19},{"year":2021,"cited_by_count":36},{"year":2020,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
