{"id":"https://openalex.org/W3017386511","doi":"https://doi.org/10.1093/bioinformatics/btaa250","title":"Phigaro: high-throughput prophage sequence annotation","display_name":"Phigaro: high-throughput prophage sequence annotation","publication_year":2020,"publication_date":"2020-04-14","ids":{"openalex":"https://openalex.org/W3017386511","doi":"https://doi.org/10.1093/bioinformatics/btaa250","mag":"3017386511","pmid":"https://pubmed.ncbi.nlm.nih.gov/32311023"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btaa250","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa250","pdf_url":"https://watermark.silverchair.com/btaa250.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAsIwggK-BgkqhkiG9w0BBwagggKvMIICqwIBADCCAqQGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQM8pigj1Aoa65fxacAAgEQgIICdYBRGxNuT_VU0Zw1JO58YkqWSpjxX9Sqo6Ig6nDvuFwSazMcwAJnPyV8iO62CYZxsEMn4J27T9g6KtUZE226xzpOwSR6PbTAtH72d9rtClRFISRqP0iwfE57uGFFtDXGPpvgLTThMQTgyOaGXljF_pBgpkaLddhVWY0VidCKWO5-u0Icla4XzhnVY7hXs9CxWFqjZj-U-KhMfwLe8uQvt6p1FP2-7zEtXCbl4ziPAdDaRN41-Xp6RBX5Kk8M-M4UfvvzKYhsOWiP1dyqJUnC4h1jAj1_TN25fufVALIdtz5jLVJKmbesWw7tbsGOGuqsQWHgY5GptNcNlkjDOgv5-mEvLNhKUrDX9hH_D29ysnZaB4JpL7Y0ItcO6KycwxbwHbYa_tHqVnhe-WsTt6gcHJ0ripdyBFW4hSlUEvbLVaF0Wyu_BWWPh-ssr_9Aayd5Swusu5jnPcrm38YtKKhc-7SYsjW76HQ901bhYYb7hIYy76nqEw8jZDlHCvn_jDTa_r7XpdWQyPHYaAkiH91BfFhnqDWXMOyLdExOd9AQogmef4AAQEbXA7iM5g6yDQjGJyYXV5w31R4FsQI3cIpwl7G3o_RUYgGnyDOxqQrR2UL8w0oPNQqJN-IvHmDUw1Fz4SbzkS4DljVC_XqeHXGvo9xnJrb0Izq3x4hBTH3T0OHQW6SykwN0aECY-P1kBzMIH6OKVLDojxDwVHWwlSgaBsaK1H8fE_Ke3KgTkZ1gldjYvnZjQDJIPY7FqbJdujJ-nfKXLM7fpAr4yX4E0ojMo6guoIfrYtyH26FDsPmzXP2C5AueYb4wJdlorwF3axB3LBn2YCM6","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://watermark.silverchair.com/btaa250.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAsIwggK-BgkqhkiG9w0BBwagggKvMIICqwIBADCCAqQGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQM8pigj1Aoa65fxacAAgEQgIICdYBRGxNuT_VU0Zw1JO58YkqWSpjxX9Sqo6Ig6nDvuFwSazMcwAJnPyV8iO62CYZxsEMn4J27T9g6KtUZE226xzpOwSR6PbTAtH72d9rtClRFISRqP0iwfE57uGFFtDXGPpvgLTThMQTgyOaGXljF_pBgpkaLddhVWY0VidCKWO5-u0Icla4XzhnVY7hXs9CxWFqjZj-U-KhMfwLe8uQvt6p1FP2-7zEtXCbl4ziPAdDaRN41-Xp6RBX5Kk8M-M4UfvvzKYhsOWiP1dyqJUnC4h1jAj1_TN25fufVALIdtz5jLVJKmbesWw7tbsGOGuqsQWHgY5GptNcNlkjDOgv5-mEvLNhKUrDX9hH_D29ysnZaB4JpL7Y0ItcO6KycwxbwHbYa_tHqVnhe-WsTt6gcHJ0ripdyBFW4hSlUEvbLVaF0Wyu_BWWPh-ssr_9Aayd5Swusu5jnPcrm38YtKKhc-7SYsjW76HQ901bhYYb7hIYy76nqEw8jZDlHCvn_jDTa_r7XpdWQyPHYaAkiH91BfFhnqDWXMOyLdExOd9AQogmef4AAQEbXA7iM5g6yDQjGJyYXV5w31R4FsQI3cIpwl7G3o_RUYgGnyDOxqQrR2UL8w0oPNQqJN-IvHmDUw1Fz4SbzkS4DljVC_XqeHXGvo9xnJrb0Izq3x4hBTH3T0OHQW6SykwN0aECY-P1kBzMIH6OKVLDojxDwVHWwlSgaBsaK1H8fE_Ke3KgTkZ1gldjYvnZjQDJIPY7FqbJdujJ-nfKXLM7fpAr4yX4E0ojMo6guoIfrYtyH26FDsPmzXP2C5AueYb4wJdlorwF3axB3LBn2YCM6","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5034768235","display_name":"Elizaveta V. Starikova","orcid":"https://orcid.org/0000-0001-6582-210X"},"institutions":[{"id":"https://openalex.org/I4210141537","display_name":"Federal Research and Clinical Center of Physical-Chemical Medicine named after Y.M. Lopukhin","ror":"https://ror.org/03snjhe90","country_code":"RU","type":"facility","lineage":["https://openalex.org/I4210141537","https://openalex.org/I64264942"]}],"countries":["RU"],"is_corresponding":true,"raw_author_name":"Elizaveta V Starikova","raw_affiliation_strings":["Department of Molecular Biology and Genetics , Federal Research and Clinical Centre of Physical-Chemical Medicine, Moscow 119435, Russia"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Biology and Genetics , Federal Research and Clinical Centre of Physical-Chemical Medicine, Moscow 119435, Russia","institution_ids":["https://openalex.org/I4210141537"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012910153","display_name":"Polina Tikhonova","orcid":"https://orcid.org/0000-0003-2353-6070"},"institutions":[{"id":"https://openalex.org/I4210141537","display_name":"Federal Research and Clinical Center of Physical-Chemical Medicine named after Y.M. Lopukhin","ror":"https://ror.org/03snjhe90","country_code":"RU","type":"facility","lineage":["https://openalex.org/I4210141537","https://openalex.org/I64264942"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Polina O Tikhonova","raw_affiliation_strings":["Department of Molecular Biology and Genetics , Federal Research and Clinical Centre of Physical-Chemical Medicine, Moscow 119435, Russia"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Biology and Genetics , Federal Research and Clinical Centre of Physical-Chemical Medicine, Moscow 119435, Russia","institution_ids":["https://openalex.org/I4210141537"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112338504","display_name":"Nikita A. Prianichnikov","orcid":null},"institutions":[{"id":"https://openalex.org/I4210141537","display_name":"Federal Research and Clinical Center of Physical-Chemical Medicine named after Y.M. Lopukhin","ror":"https://ror.org/03snjhe90","country_code":"RU","type":"facility","lineage":["https://openalex.org/I4210141537","https://openalex.org/I64264942"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Nikita A Prianichnikov","raw_affiliation_strings":["Department of Molecular Biology and Genetics , Federal Research and Clinical Centre of Physical-Chemical Medicine, Moscow 119435, Russia"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Biology and Genetics , Federal Research and Clinical Centre of Physical-Chemical Medicine, Moscow 119435, Russia","institution_ids":["https://openalex.org/I4210141537"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039761726","display_name":"Chris M. Rands","orcid":null},"institutions":[{"id":"https://openalex.org/I114457229","display_name":"University of Geneva","ror":"https://ror.org/01swzsf04","country_code":"CH","type":"education","lineage":["https://openalex.org/I114457229"]},{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Chris M Rands","raw_affiliation_strings":["Department of Genetic Medicine and Development , University of Geneva Medical School and Swiss Institute of Bioinformatics, Geneva 1206, Switzerland"],"affiliations":[{"raw_affiliation_string":"Department of Genetic Medicine and Development , University of Geneva Medical School and Swiss Institute of Bioinformatics, Geneva 1206, Switzerland","institution_ids":["https://openalex.org/I12708293","https://openalex.org/I114457229"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029893038","display_name":"Evgeny M. Zdobnov","orcid":"https://orcid.org/0000-0002-5178-1498"},"institutions":[{"id":"https://openalex.org/I114457229","display_name":"University of Geneva","ror":"https://ror.org/01swzsf04","country_code":"CH","type":"education","lineage":["https://openalex.org/I114457229"]},{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Evgeny M Zdobnov","raw_affiliation_strings":["Department of Genetic Medicine and Development , University of Geneva Medical School and Swiss Institute of Bioinformatics, Geneva 1206, Switzerland"],"affiliations":[{"raw_affiliation_string":"Department of Genetic Medicine and Development , University of Geneva Medical School and Swiss Institute of Bioinformatics, Geneva 1206, Switzerland","institution_ids":["https://openalex.org/I12708293","https://openalex.org/I114457229"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016072993","display_name":"Elena N. Ilina","orcid":"https://orcid.org/0000-0003-0130-5079"},"institutions":[{"id":"https://openalex.org/I4210141537","display_name":"Federal Research and Clinical Center of Physical-Chemical Medicine named after Y.M. Lopukhin","ror":"https://ror.org/03snjhe90","country_code":"RU","type":"facility","lineage":["https://openalex.org/I4210141537","https://openalex.org/I64264942"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Elena N Ilina","raw_affiliation_strings":["Department of Molecular Biology and Genetics , Federal Research and Clinical Centre of Physical-Chemical Medicine, Moscow 119435, Russia"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Biology and Genetics , Federal Research and Clinical Centre of Physical-Chemical Medicine, Moscow 119435, Russia","institution_ids":["https://openalex.org/I4210141537"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5016453551","display_name":"Vadim M. Govorun","orcid":"https://orcid.org/0000-0003-0837-8764"},"institutions":[{"id":"https://openalex.org/I4210141537","display_name":"Federal Research and Clinical Center of Physical-Chemical Medicine named after Y.M. Lopukhin","ror":"https://ror.org/03snjhe90","country_code":"RU","type":"facility","lineage":["https://openalex.org/I4210141537","https://openalex.org/I64264942"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Vadim M Govorun","raw_affiliation_strings":["Department of Molecular Biology and Genetics , Federal Research and Clinical Centre of Physical-Chemical Medicine, Moscow 119435, Russia"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Biology and Genetics , Federal Research and Clinical Centre of Physical-Chemical Medicine, Moscow 119435, Russia","institution_ids":["https://openalex.org/I4210141537"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5034768235"],"corresponding_institution_ids":["https://openalex.org/I4210141537"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":12.2172,"has_fulltext":false,"cited_by_count":224,"citation_normalized_percentile":{"value":0.99120434,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":"36","issue":"12","first_page":"3882","last_page":"3884"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11048","display_name":"Bacteriophages and microbial interactions","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11048","display_name":"Bacteriophages and microbial interactions","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9869999885559082,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11688","display_name":"Microbial infections and disease research","score":0.9789999723434448,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/prophage","display_name":"Prophage","score":0.9279351234436035},{"id":"https://openalex.org/keywords/python","display_name":"Python (programming language)","score":0.7063999176025391},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.6775813102722168},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6504360437393188},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.5946850180625916},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5459262132644653},{"id":"https://openalex.org/keywords/metagenomics","display_name":"Metagenomics","score":0.5032619833946228},{"id":"https://openalex.org/keywords/transposable-element","display_name":"Transposable element","score":0.497299462556839},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.40600359439849854},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3505607843399048},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.2884242534637451},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.263991117477417},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.10674166679382324},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.09126576781272888}],"concepts":[{"id":"https://openalex.org/C73445445","wikidata":"https://www.wikidata.org/wiki/Q1712327","display_name":"Prophage","level":5,"score":0.9279351234436035},{"id":"https://openalex.org/C519991488","wikidata":"https://www.wikidata.org/wiki/Q28865","display_name":"Python (programming language)","level":2,"score":0.7063999176025391},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.6775813102722168},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6504360437393188},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.5946850180625916},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5459262132644653},{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.5032619833946228},{"id":"https://openalex.org/C4918238","wikidata":"https://www.wikidata.org/wiki/Q121438","display_name":"Transposable element","level":4,"score":0.497299462556839},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.40600359439849854},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3505607843399048},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.2884242534637451},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.263991117477417},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.10674166679382324},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.09126576781272888},{"id":"https://openalex.org/C2776441376","wikidata":"https://www.wikidata.org/wiki/Q165028","display_name":"Bacteriophage","level":4,"score":0.0},{"id":"https://openalex.org/C547475151","wikidata":"https://www.wikidata.org/wiki/Q25419","display_name":"Escherichia coli","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039002","descriptor_name":"Prophages","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D039002","descriptor_name":"Prophages","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D039002","descriptor_name":"Prophages","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D054892","descriptor_name":"Metagenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D054892","descriptor_name":"Metagenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D054892","descriptor_name":"Metagenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btaa250","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa250","pdf_url":"https://watermark.silverchair.com/btaa250.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAsIwggK-BgkqhkiG9w0BBwagggKvMIICqwIBADCCAqQGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQM8pigj1Aoa65fxacAAgEQgIICdYBRGxNuT_VU0Zw1JO58YkqWSpjxX9Sqo6Ig6nDvuFwSazMcwAJnPyV8iO62CYZxsEMn4J27T9g6KtUZE226xzpOwSR6PbTAtH72d9rtClRFISRqP0iwfE57uGFFtDXGPpvgLTThMQTgyOaGXljF_pBgpkaLddhVWY0VidCKWO5-u0Icla4XzhnVY7hXs9CxWFqjZj-U-KhMfwLe8uQvt6p1FP2-7zEtXCbl4ziPAdDaRN41-Xp6RBX5Kk8M-M4UfvvzKYhsOWiP1dyqJUnC4h1jAj1_TN25fufVALIdtz5jLVJKmbesWw7tbsGOGuqsQWHgY5GptNcNlkjDOgv5-mEvLNhKUrDX9hH_D29ysnZaB4JpL7Y0ItcO6KycwxbwHbYa_tHqVnhe-WsTt6gcHJ0ripdyBFW4hSlUEvbLVaF0Wyu_BWWPh-ssr_9Aayd5Swusu5jnPcrm38YtKKhc-7SYsjW76HQ901bhYYb7hIYy76nqEw8jZDlHCvn_jDTa_r7XpdWQyPHYaAkiH91BfFhnqDWXMOyLdExOd9AQogmef4AAQEbXA7iM5g6yDQjGJyYXV5w31R4FsQI3cIpwl7G3o_RUYgGnyDOxqQrR2UL8w0oPNQqJN-IvHmDUw1Fz4SbzkS4DljVC_XqeHXGvo9xnJrb0Izq3x4hBTH3T0OHQW6SykwN0aECY-P1kBzMIH6OKVLDojxDwVHWwlSgaBsaK1H8fE_Ke3KgTkZ1gldjYvnZjQDJIPY7FqbJdujJ-nfKXLM7fpAr4yX4E0ojMo6guoIfrYtyH26FDsPmzXP2C5AueYb4wJdlorwF3axB3LBn2YCM6","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:32311023","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/32311023","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btaa250","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa250","pdf_url":"https://watermark.silverchair.com/btaa250.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAsIwggK-BgkqhkiG9w0BBwagggKvMIICqwIBADCCAqQGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQM8pigj1Aoa65fxacAAgEQgIICdYBRGxNuT_VU0Zw1JO58YkqWSpjxX9Sqo6Ig6nDvuFwSazMcwAJnPyV8iO62CYZxsEMn4J27T9g6KtUZE226xzpOwSR6PbTAtH72d9rtClRFISRqP0iwfE57uGFFtDXGPpvgLTThMQTgyOaGXljF_pBgpkaLddhVWY0VidCKWO5-u0Icla4XzhnVY7hXs9CxWFqjZj-U-KhMfwLe8uQvt6p1FP2-7zEtXCbl4ziPAdDaRN41-Xp6RBX5Kk8M-M4UfvvzKYhsOWiP1dyqJUnC4h1jAj1_TN25fufVALIdtz5jLVJKmbesWw7tbsGOGuqsQWHgY5GptNcNlkjDOgv5-mEvLNhKUrDX9hH_D29ysnZaB4JpL7Y0ItcO6KycwxbwHbYa_tHqVnhe-WsTt6gcHJ0ripdyBFW4hSlUEvbLVaF0Wyu_BWWPh-ssr_9Aayd5Swusu5jnPcrm38YtKKhc-7SYsjW76HQ901bhYYb7hIYy76nqEw8jZDlHCvn_jDTa_r7XpdWQyPHYaAkiH91BfFhnqDWXMOyLdExOd9AQogmef4AAQEbXA7iM5g6yDQjGJyYXV5w31R4FsQI3cIpwl7G3o_RUYgGnyDOxqQrR2UL8w0oPNQqJN-IvHmDUw1Fz4SbzkS4DljVC_XqeHXGvo9xnJrb0Izq3x4hBTH3T0OHQW6SykwN0aECY-P1kBzMIH6OKVLDojxDwVHWwlSgaBsaK1H8fE_Ke3KgTkZ1gldjYvnZjQDJIPY7FqbJdujJ-nfKXLM7fpAr4yX4E0ojMo6guoIfrYtyH26FDsPmzXP2C5AueYb4wJdlorwF3axB3LBn2YCM6","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G4329284170","display_name":null,"funder_award_id":"IZLRZ3_163863","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"},{"id":"https://openalex.org/G5867779315","display_name":null,"funder_award_id":"16-54-21012","funder_id":"https://openalex.org/F4320321079","funder_display_name":"Russian Foundation for Basic Research"}],"funders":[{"id":"https://openalex.org/F4320320924","display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung","ror":"https://ror.org/00yjd3n13"},{"id":"https://openalex.org/F4320321079","display_name":"Russian Foundation for Basic Research","ror":"https://ror.org/02mh1ke95"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3017386511.pdf","grobid_xml":"https://content.openalex.org/works/W3017386511.grobid-xml"},"referenced_works_count":17,"referenced_works":["https://openalex.org/W1766888123","https://openalex.org/W1921607560","https://openalex.org/W2119859604","https://openalex.org/W2130124027","https://openalex.org/W2141394464","https://openalex.org/W2143485490","https://openalex.org/W2158406706","https://openalex.org/W2345791363","https://openalex.org/W2413648494","https://openalex.org/W2478884216","https://openalex.org/W2545536333","https://openalex.org/W2548401410","https://openalex.org/W2594630120","https://openalex.org/W2741628575","https://openalex.org/W2767759966","https://openalex.org/W2808888604","https://openalex.org/W2918063357"],"related_works":["https://openalex.org/W4398206047","https://openalex.org/W1993522840","https://openalex.org/W2792556531","https://openalex.org/W3011753877","https://openalex.org/W2130348632","https://openalex.org/W3097445972","https://openalex.org/W2073801401","https://openalex.org/W3146800050","https://openalex.org/W2063981278","https://openalex.org/W2789551765"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2026,"cited_by_count":22},{"year":2025,"cited_by_count":63},{"year":2024,"cited_by_count":63},{"year":2023,"cited_by_count":35},{"year":2022,"cited_by_count":20},{"year":2021,"cited_by_count":14},{"year":2020,"cited_by_count":7}],"updated_date":"2026-04-11T08:14:18.477133","created_date":"2025-10-10T00:00:00"}
