{"id":"https://openalex.org/W3011364206","doi":"https://doi.org/10.1093/bioinformatics/btaa133","title":"Leitmotif: protein motif scanning 2.0","display_name":"Leitmotif: protein motif scanning 2.0","publication_year":2020,"publication_date":"2020-03-06","ids":{"openalex":"https://openalex.org/W3011364206","doi":"https://doi.org/10.1093/bioinformatics/btaa133","mag":"3011364206","pmid":"https://pubmed.ncbi.nlm.nih.gov/32154834"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btaa133","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa133","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"http://fulir.irb.hr/6803/","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5066918679","display_name":"Sini\u0161a Bi\u0111in","orcid":null},"institutions":[{"id":"https://openalex.org/I181343428","display_name":"University of Zagreb","ror":"https://ror.org/00mv6sv71","country_code":"HR","type":"education","lineage":["https://openalex.org/I181343428"]}],"countries":["HR"],"is_corresponding":false,"raw_author_name":"Sini\u0161a Bi\u0111in","raw_affiliation_strings":["Faculty of Electrical Engineering and Computing , University of Zagreb, 10 000 Zagreb, Croatia"],"affiliations":[{"raw_affiliation_string":"Faculty of Electrical Engineering and Computing , University of Zagreb, 10 000 Zagreb, Croatia","institution_ids":["https://openalex.org/I181343428"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045919046","display_name":"Ivan Vujaklija","orcid":"https://orcid.org/0000-0002-7394-9474"},"institutions":[{"id":"https://openalex.org/I181343428","display_name":"University of Zagreb","ror":"https://ror.org/00mv6sv71","country_code":"HR","type":"education","lineage":["https://openalex.org/I181343428"]}],"countries":["HR"],"is_corresponding":true,"raw_author_name":"Ivan Vujaklija","raw_affiliation_strings":["Faculty of Electrical Engineering and Computing , University of Zagreb, 10 000 Zagreb, Croatia"],"affiliations":[{"raw_affiliation_string":"Faculty of Electrical Engineering and Computing , University of Zagreb, 10 000 Zagreb, Croatia","institution_ids":["https://openalex.org/I181343428"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015689972","display_name":"Tina Parad\u017eik","orcid":"https://orcid.org/0000-0003-2306-8932"},"institutions":[{"id":"https://openalex.org/I4210123216","display_name":"Rudjer Boskovic Institute","ror":"https://ror.org/02mw21745","country_code":"HR","type":"facility","lineage":["https://openalex.org/I4210123216"]}],"countries":["HR"],"is_corresponding":false,"raw_author_name":"Tina Parad\u017eik","raw_affiliation_strings":["Division of Physical Chemistry , Institute Ru\u0111er Bo\u0161kovi\u0107, 10 000 Zagreb, Croatia"],"affiliations":[{"raw_affiliation_string":"Division of Physical Chemistry , Institute Ru\u0111er Bo\u0161kovi\u0107, 10 000 Zagreb, Croatia","institution_ids":["https://openalex.org/I4210123216"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030658843","display_name":"Ana Bielen","orcid":"https://orcid.org/0000-0002-4486-6688"},"institutions":[{"id":"https://openalex.org/I181343428","display_name":"University of Zagreb","ror":"https://ror.org/00mv6sv71","country_code":"HR","type":"education","lineage":["https://openalex.org/I181343428"]}],"countries":["HR"],"is_corresponding":false,"raw_author_name":"Ana Bielen","raw_affiliation_strings":["Department of Biochemical Engineering , Faculty of Food Technology and Biotechnology, University of Zagreb, 10 000 Zagreb, Croatia"],"affiliations":[{"raw_affiliation_string":"Department of Biochemical Engineering , Faculty of Food Technology and Biotechnology, University of Zagreb, 10 000 Zagreb, Croatia","institution_ids":["https://openalex.org/I181343428"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5043426529","display_name":"Du\u0161ica Vujaklija","orcid":"https://orcid.org/0000-0003-1184-1828"},"institutions":[{"id":"https://openalex.org/I4210123216","display_name":"Rudjer Boskovic Institute","ror":"https://ror.org/02mw21745","country_code":"HR","type":"facility","lineage":["https://openalex.org/I4210123216"]}],"countries":["HR"],"is_corresponding":true,"raw_author_name":"Du\u0161ica Vujaklija","raw_affiliation_strings":["Division of Physical Chemistry , Institute Ru\u0111er Bo\u0161kovi\u0107, 10 000 Zagreb, Croatia"],"affiliations":[{"raw_affiliation_string":"Division of Physical Chemistry , Institute Ru\u0111er Bo\u0161kovi\u0107, 10 000 Zagreb, Croatia","institution_ids":["https://openalex.org/I4210123216"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5043426529","https://openalex.org/A5045919046"],"corresponding_institution_ids":["https://openalex.org/I181343428","https://openalex.org/I4210123216"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.4476,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.56691748,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":"36","issue":"11","first_page":"3566","last_page":"3567"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/motif","display_name":"Motif (music)","score":0.709956169128418},{"id":"https://openalex.org/keywords/false-positive-paradox","display_name":"False positive paradox","score":0.7063356041908264},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5742796063423157},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3548012971878052},{"id":"https://openalex.org/keywords/art","display_name":"Art","score":0.0715688169002533}],"concepts":[{"id":"https://openalex.org/C32276052","wikidata":"https://www.wikidata.org/wiki/Q908349","display_name":"Motif (music)","level":2,"score":0.709956169128418},{"id":"https://openalex.org/C64869954","wikidata":"https://www.wikidata.org/wiki/Q1859747","display_name":"False positive paradox","level":2,"score":0.7063356041908264},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5742796063423157},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3548012971878052},{"id":"https://openalex.org/C142362112","wikidata":"https://www.wikidata.org/wiki/Q735","display_name":"Art","level":0,"score":0.0715688169002533},{"id":"https://openalex.org/C107038049","wikidata":"https://www.wikidata.org/wiki/Q35986","display_name":"Aesthetics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020816","descriptor_name":"Amino Acid Motifs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020816","descriptor_name":"Amino Acid Motifs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020816","descriptor_name":"Amino Acid Motifs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btaa133","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa133","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:32154834","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/32154834","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:fulir.irb.hr:6803","is_oa":true,"landing_page_url":"http://fulir.irb.hr/6803/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400095","display_name":"Institutional Repository  of the Ru\u0111er Bo\u0161kovi\u0107 Institute (Ru\u0111er Bo\u0161kovi\u0107 Institute)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210123216","host_organization_name":"Ru\u0111er Bo\u0161kovi\u0107 Institute","host_organization_lineage":["https://openalex.org/I4210123216"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"pmh:oai:fulir.irb.hr:6803","is_oa":true,"landing_page_url":"http://fulir.irb.hr/6803/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400095","display_name":"Institutional Repository  of the Ru\u0111er Bo\u0161kovi\u0107 Institute (Ru\u0111er Bo\u0161kovi\u0107 Institute)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210123216","host_organization_name":"Ru\u0111er Bo\u0161kovi\u0107 Institute","host_organization_lineage":["https://openalex.org/I4210123216"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"info:eu-repo/semantics/article"},"sustainable_development_goals":[{"display_name":"Reduced inequalities","id":"https://metadata.un.org/sdg/10","score":0.6700000166893005}],"awards":[],"funders":[{"id":"https://openalex.org/F4320335322","display_name":"European Regional Development Fund","ror":"https://ror.org/00k4n6c32"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":14,"referenced_works":["https://openalex.org/W92334937","https://openalex.org/W2009977236","https://openalex.org/W2077576035","https://openalex.org/W2087063713","https://openalex.org/W2098165162","https://openalex.org/W2133312664","https://openalex.org/W2158572678","https://openalex.org/W2281439517","https://openalex.org/W2552310023","https://openalex.org/W2616925363","https://openalex.org/W2623919980","https://openalex.org/W2801459458","https://openalex.org/W2807818025","https://openalex.org/W6695491034"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W3170299350","https://openalex.org/W2368410102","https://openalex.org/W1557094818","https://openalex.org/W2368037387","https://openalex.org/W190186656","https://openalex.org/W2377079823","https://openalex.org/W2902352756","https://openalex.org/W2605676258","https://openalex.org/W2599962286"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2020,"cited_by_count":2}],"updated_date":"2026-02-26T08:16:20.718346","created_date":"2025-10-10T00:00:00"}
