{"id":"https://openalex.org/W2109401902","doi":"https://doi.org/10.1093/bib/bbt022","title":"Next-generation sequencing: a challenge to meet the increasing demand for training workshops in Australia","display_name":"Next-generation sequencing: a challenge to meet the increasing demand for training workshops in Australia","publication_year":2013,"publication_date":"2013-03-29","ids":{"openalex":"https://openalex.org/W2109401902","doi":"https://doi.org/10.1093/bib/bbt022","mag":"2109401902","pmid":"https://pubmed.ncbi.nlm.nih.gov/23543352"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbt022","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbt022","pdf_url":"https://academic.oup.com/bib/article-pdf/14/5/563/581560/bbt022.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bib/article-pdf/14/5/563/581560/bbt022.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5088788062","display_name":"Nathan S. Watson\u2010Haigh","orcid":"https://orcid.org/0000-0002-7935-6151"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"N. S. Watson-Haigh","raw_affiliation_strings":["The Australian Centre for Plant Functional Genomics, University of Adelaide, SA 5064, Australia. nathan.haigh@acpfg.com.au","The Australian Centre for Plant Functional Genomics, University of Adelaide, SA 5064, Australia"],"affiliations":[{"raw_affiliation_string":"The Australian Centre for Plant Functional Genomics, University of Adelaide, SA 5064, Australia. nathan.haigh@acpfg.com.au","institution_ids":[]},{"raw_affiliation_string":"The Australian Centre for Plant Functional Genomics, University of Adelaide, SA 5064, Australia","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091517487","display_name":"Catherine A. Shang","orcid":"https://orcid.org/0000-0002-5116-4668"},"institutions":[{"id":"https://openalex.org/I99043593","display_name":"Macquarie University","ror":"https://ror.org/01sf06y89","country_code":"AU","type":"education","lineage":["https://openalex.org/I99043593"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"C. A. Shang","raw_affiliation_strings":["Macquarie University"],"affiliations":[{"raw_affiliation_string":"Macquarie University","institution_ids":["https://openalex.org/I99043593"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021650465","display_name":"Matthias Haimel","orcid":"https://orcid.org/0000-0002-0320-0214"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"M. Haimel","raw_affiliation_strings":["European Bioinformatics Institute"],"affiliations":[{"raw_affiliation_string":"European Bioinformatics Institute","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029443733","display_name":"Myrto Kostadima","orcid":"https://orcid.org/0000-0002-1818-4050"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"M. Kostadima","raw_affiliation_strings":["European Bioinformatics Institute"],"affiliations":[{"raw_affiliation_string":"European Bioinformatics Institute","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016233543","display_name":"Ruth J. F. Loos","orcid":"https://orcid.org/0000-0002-8532-5087"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"R. Loos","raw_affiliation_strings":["European Bioinformatics Institute"],"affiliations":[{"raw_affiliation_string":"European Bioinformatics Institute","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025225490","display_name":"N. Deshpande","orcid":null},"institutions":[{"id":"https://openalex.org/I31746571","display_name":"UNSW Sydney","ror":"https://ror.org/03r8z3t63","country_code":"AU","type":"education","lineage":["https://openalex.org/I31746571"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"N. Deshpande","raw_affiliation_strings":["University Of New south Wales"],"affiliations":[{"raw_affiliation_string":"University Of New south Wales","institution_ids":["https://openalex.org/I31746571"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071015230","display_name":"Konsta Duesing","orcid":"https://orcid.org/0000-0003-3103-0600"},"institutions":[{"id":"https://openalex.org/I1292875679","display_name":"Commonwealth Scientific and Industrial Research Organisation","ror":"https://ror.org/03qn8fb07","country_code":"AU","type":"funder","lineage":["https://openalex.org/I1292875679","https://openalex.org/I2801453606","https://openalex.org/I4387156119"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"K. Duesing","raw_affiliation_strings":["CSIRO Computational Informatics (Victoria)"],"affiliations":[{"raw_affiliation_string":"CSIRO Computational Informatics (Victoria)","institution_ids":["https://openalex.org/I1292875679"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100407701","display_name":"Xi Li","orcid":"https://orcid.org/0000-0001-6325-3230"},"institutions":[{"id":"https://openalex.org/I1292875679","display_name":"Commonwealth Scientific and Industrial Research Organisation","ror":"https://ror.org/03qn8fb07","country_code":"AU","type":"funder","lineage":["https://openalex.org/I1292875679","https://openalex.org/I2801453606","https://openalex.org/I4387156119"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"X. Li","raw_affiliation_strings":["CSIRO Computational Informatics (Victoria)"],"affiliations":[{"raw_affiliation_string":"CSIRO Computational Informatics (Victoria)","institution_ids":["https://openalex.org/I1292875679"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043315317","display_name":"Annette McGrath","orcid":"https://orcid.org/0000-0002-1765-7039"},"institutions":[{"id":"https://openalex.org/I1292875679","display_name":"Commonwealth Scientific and Industrial Research Organisation","ror":"https://ror.org/03qn8fb07","country_code":"AU","type":"funder","lineage":["https://openalex.org/I1292875679","https://openalex.org/I2801453606","https://openalex.org/I4387156119"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"A. McGrath","raw_affiliation_strings":["CSIRO Computational Informatics (Victoria)"],"affiliations":[{"raw_affiliation_string":"CSIRO Computational Informatics (Victoria)","institution_ids":["https://openalex.org/I1292875679"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063522743","display_name":"Sean McWilliam","orcid":"https://orcid.org/0000-0002-3148-0428"},"institutions":[{"id":"https://openalex.org/I1292875679","display_name":"Commonwealth Scientific and Industrial Research Organisation","ror":"https://ror.org/03qn8fb07","country_code":"AU","type":"funder","lineage":["https://openalex.org/I1292875679","https://openalex.org/I2801453606","https://openalex.org/I4387156119"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"S. McWilliam","raw_affiliation_strings":["CSIRO Computational Informatics (Victoria)"],"affiliations":[{"raw_affiliation_string":"CSIRO Computational Informatics (Victoria)","institution_ids":["https://openalex.org/I1292875679"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5096893497","display_name":"S. Michnowicz","orcid":null},"institutions":[{"id":"https://openalex.org/I118347636","display_name":"Australian National University","ror":"https://ror.org/019wvm592","country_code":"AU","type":"education","lineage":["https://openalex.org/I118347636"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"S. Michnowicz","raw_affiliation_strings":["Australian National University"],"affiliations":[{"raw_affiliation_string":"Australian National University","institution_ids":["https://openalex.org/I118347636"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048177712","display_name":"Paula Moolhuijzen","orcid":"https://orcid.org/0000-0002-3502-7612"},"institutions":[{"id":"https://openalex.org/I176790772","display_name":"Murdoch University","ror":"https://ror.org/00r4sry34","country_code":"AU","type":"education","lineage":["https://openalex.org/I176790772"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"P. Moolhuijzen","raw_affiliation_strings":["Murdoch university"],"affiliations":[{"raw_affiliation_string":"Murdoch university","institution_ids":["https://openalex.org/I176790772"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032598087","display_name":"Steve Quenette","orcid":"https://orcid.org/0000-0002-0368-7341"},"institutions":[{"id":"https://openalex.org/I4210121067","display_name":"Monash Health","ror":"https://ror.org/02t1bej08","country_code":"AU","type":"healthcare","lineage":["https://openalex.org/I4210121067"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"S. Quenette","raw_affiliation_strings":["Monash e-Research Ctr"],"affiliations":[{"raw_affiliation_string":"Monash e-Research Ctr","institution_ids":["https://openalex.org/I4210121067"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059942694","display_name":"Jerico Revote","orcid":"https://orcid.org/0000-0002-0381-3600"},"institutions":[{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"J. N. D. L. Revote","raw_affiliation_strings":["NeCTAR Research Cloud node at Monash University,","The Australian Centre for Plant Functional Genomics, University of Adelaide, SA 5064, Australia"],"affiliations":[{"raw_affiliation_string":"NeCTAR Research Cloud node at Monash University,","institution_ids":["https://openalex.org/I56590836"]},{"raw_affiliation_string":"The Australian Centre for Plant Functional Genomics, University of Adelaide, SA 5064, Australia","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026685311","display_name":"Sonika Tyagi","orcid":"https://orcid.org/0000-0003-0181-6258"},"institutions":[{"id":"https://openalex.org/I4210154382","display_name":"Australian Genome Research Facility","ror":"https://ror.org/053v53919","country_code":"AU","type":"facility","lineage":["https://openalex.org/I4210154382"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"S. Tyagi","raw_affiliation_strings":["Australian Genome Research Facility"],"affiliations":[{"raw_affiliation_string":"Australian Genome Research Facility","institution_ids":["https://openalex.org/I4210154382"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5066490454","display_name":"Maria Victoria Schneider","orcid":"https://orcid.org/0000-0002-7114-2060"},"institutions":[{"id":"https://openalex.org/I4210100714","display_name":"Earlham Institute","ror":"https://ror.org/018cxtf62","country_code":"GB","type":"facility","lineage":["https://openalex.org/I2799693246","https://openalex.org/I4210087105","https://openalex.org/I4210100714"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"M. V. Schneider","raw_affiliation_strings":["The Genome Analysis Centre"],"affiliations":[{"raw_affiliation_string":"The Genome Analysis Centre","institution_ids":["https://openalex.org/I4210100714"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":16,"corresponding_author_ids":["https://openalex.org/A5088788062"],"corresponding_institution_ids":[],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":1.1979,"has_fulltext":true,"cited_by_count":18,"citation_normalized_percentile":{"value":0.78861747,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"14","issue":"5","first_page":"563","last_page":"574"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.98580002784729,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9821000099182129,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/training","display_name":"Training (meteorology)","score":0.700312077999115},{"id":"https://openalex.org/keywords/dna-sequencing","display_name":"DNA sequencing","score":0.6122159361839294},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.38796815276145935},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2685064375400543},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.17890670895576477},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.14780151844024658},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.09847438335418701}],"concepts":[{"id":"https://openalex.org/C2777211547","wikidata":"https://www.wikidata.org/wiki/Q17141490","display_name":"Training (meteorology)","level":2,"score":0.700312077999115},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.6122159361839294},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.38796815276145935},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2685064375400543},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.17890670895576477},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.14780151844024658},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.09847438335418701},{"id":"https://openalex.org/C153294291","wikidata":"https://www.wikidata.org/wiki/Q25261","display_name":"Meteorology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001315","descriptor_name":"Australia","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001315","descriptor_name":"Australia","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001315","descriptor_name":"Australia","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003194","descriptor_name":"Computer-Assisted Instruction","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D003194","descriptor_name":"Computer-Assisted Instruction","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D003194","descriptor_name":"Computer-Assisted Instruction","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D003299","descriptor_name":"Cooperative Behavior","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003299","descriptor_name":"Cooperative Behavior","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003299","descriptor_name":"Cooperative Behavior","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003479","descriptor_name":"Curriculum","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003479","descriptor_name":"Curriculum","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003479","descriptor_name":"Curriculum","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013663","descriptor_name":"Teaching","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013663","descriptor_name":"Teaching","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013663","descriptor_name":"Teaching","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000193","qualifier_name":"education","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000193","qualifier_name":"education","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000193","qualifier_name":"education","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1093/bib/bbt022","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbt022","pdf_url":"https://academic.oup.com/bib/article-pdf/14/5/563/581560/bbt022.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:23543352","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23543352","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:espace.curtin.edu.au:20.500.11937/56738","is_oa":true,"landing_page_url":"http://hdl.handle.net/20.500.11937/56738","pdf_url":"http://hdl.handle.net/20.500.11937/56738","source":{"id":"https://openalex.org/S4306401790","display_name":"eSpace (Curtin University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205640436","host_organization_name":"Curtin University","host_organization_lineage":["https://openalex.org/I205640436"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Journal Article"},{"id":"pmh:oai:jupiter.its.unimelb.edu.au:11343/260382","is_oa":true,"landing_page_url":"http://hdl.handle.net/11343/260382","pdf_url":"http://hdl.handle.net/11343/260382","source":{"id":"https://openalex.org/S4377196259","display_name":"Minerva Access (University of Melbourne)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I165779595","host_organization_name":"The University of Melbourne","host_organization_lineage":["https://openalex.org/I165779595"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal Article"},{"id":"pmh:oai:digital.library.adelaide.edu.au:2440/83145","is_oa":true,"landing_page_url":"http://hdl.handle.net/2440/83145","pdf_url":null,"source":{"id":"https://openalex.org/S4306401835","display_name":"Adelaide Research & Scholarship (AR&S) (University of Adelaide)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I5681781","host_organization_name":"The University of Adelaide","host_organization_lineage":["https://openalex.org/I5681781"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://dx.doi.org/10.1093/bib/bbt022","raw_type":"Journal article"},{"id":"pmh:oai:europepmc.org:2763406","is_oa":false,"landing_page_url":"http://europepmc.org/articles/PMC3771231","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3771231","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3771231","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbt022","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbt022","pdf_url":"https://academic.oup.com/bib/article-pdf/14/5/563/581560/bbt022.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","score":0.6000000238418579,"id":"https://metadata.un.org/sdg/9"}],"awards":[{"id":"https://openalex.org/G5413484791","display_name":null,"funder_award_id":"BBS/E/T/000PR5885","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G6123500221","display_name":null,"funder_award_id":"BBS/E/T/000PR6193","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320313288","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52"},{"id":"https://openalex.org/F4320315885","display_name":"Australian Government","ror":"https://ror.org/0314h5y94"},{"id":"https://openalex.org/F4320320386","display_name":"Commonwealth Scientific and Industrial Research Organisation","ror":"https://ror.org/03qn8fb07"},{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2109401902.pdf","grobid_xml":"https://content.openalex.org/works/W2109401902.grobid-xml"},"referenced_works_count":6,"referenced_works":["https://openalex.org/W2097288488","https://openalex.org/W2137653635","https://openalex.org/W2138193360","https://openalex.org/W2154871726","https://openalex.org/W2161645441","https://openalex.org/W2163185915"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W230091440","https://openalex.org/W2390279801","https://openalex.org/W2233261550","https://openalex.org/W2358668433","https://openalex.org/W2810751659","https://openalex.org/W258997015","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W2997094352"],"abstract_inverted_index":{"The":[0,135],"widespread":[1],"adoption":[2],"of":[3,39,49,52,70,98,129,175],"high-throughput":[4],"next-generation":[5],"sequencing":[6],"(NGS)":[7],"technology":[8],"among":[9],"the":[10,77,85,102,150,159,173,182],"Australian":[11,71,86,99,153,177],"life":[12],"science":[13],"research":[14,72],"community":[15],"is":[16,35],"highlighting":[17],"an":[18,176,225],"urgent":[19],"need":[20],"to":[21,59,105,123,163,170,220,224,236],"up-skill":[22],"biologists":[23],"in":[24,44,109,147],"tools":[25],"required":[26],"for":[27,196],"handling":[28],"and":[29,57,61,80,84,111,127,181,185,194,231,238],"analysing":[30],"their":[31],"NGS":[32,118,131],"data.":[33],"There":[34],"currently":[36],"a":[37,47,50,68,198,209],"shortage":[38],"cutting-edge":[40],"bioinformatics":[41,113,178,232],"training":[42,63,94,107,179],"courses":[43],"Australia":[45,148],"as":[46],"consequence":[48],"scarcity":[51],"skilled":[53],"trainers":[54,233],"with":[55,92,200],"time":[56],"funding":[58],"develop":[60],"deliver":[62],"courses.":[64],"To":[65],"address":[66],"this,":[67],"consortium":[69],"organizations,":[73],"including":[74,172],"Bioplatforms":[75],"Australia,":[76],"Commonwealth":[78],"Scientific":[79],"Industrial":[81],"Research":[82,155],"Organisation":[83],"Bioinformatics":[87],"Network,":[88],"have":[89,203,221],"been":[90,205],"collaborating":[91],"EMBL-EBI":[93],"team.":[95],"A":[96,116,188],"group":[97],"bioinformaticians":[100],"attended":[101],"train-the-trainer":[103],"workshop":[104,114,119,138,192,201],"improve":[106],"skills":[108],"developing":[110],"delivering":[112],"curriculum.":[115],"2-day":[117],"was":[120,139],"jointly":[121],"developed":[122],"provide":[124],"hands-on":[125],"knowledge":[126],"understanding":[128],"typical":[130],"data":[132],"analysis":[133],"workflows.":[134],"road":[136],"show-style":[137],"successfully":[140],"delivered":[141],"at":[142,165],"five":[143],"geographically":[144],"distant":[145],"venues":[146],"using":[149],"newly":[151],"established":[152],"NeCTAR":[154],"Cloud.":[156],"We":[157],"highlight":[158],"challenges":[160],"we":[161],"had":[162,228],"overcome":[164],"different":[166],"stages":[167],"from":[168],"design":[169],"delivery,":[171],"establishment":[174],"network":[180],"computing":[183],"infrastructure":[184],"resource":[186],"development.":[187],"virtual":[189],"machine":[190,199],"image,":[191],"materials":[193],"scripts":[195],"configuring":[197],"contents":[202],"all":[204],"made":[206],"available":[207],"under":[208],"Creative":[210],"Commons":[211],"Attribution":[212],"3.0":[213],"Unported":[214],"License.":[215],"This":[216],"means":[217],"participants":[218],"continue":[219],"convenient":[222],"access":[223,237],"environment":[226],"they":[227],"become":[229],"familiar":[230],"are":[234],"able":[235],"reuse":[239],"these":[240],"resources.":[241]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":6},{"year":2015,"cited_by_count":1},{"year":2013,"cited_by_count":1}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
