{"id":"https://openalex.org/W2989837622","doi":"https://doi.org/10.1093/nar/gkz980","title":"EnhancerAtlas 2.0: an updated resource with enhancer annotation in 586 tissue/cell types across nine species","display_name":"EnhancerAtlas 2.0: an updated resource with enhancer annotation in 586 tissue/cell types across nine species","publication_year":2019,"publication_date":"2019-10-31","ids":{"openalex":"https://openalex.org/W2989837622","doi":"https://doi.org/10.1093/nar/gkz980","mag":"2989837622","pmid":"https://pubmed.ncbi.nlm.nih.gov/31740966"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkz980","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkz980","pdf_url":"https://academic.oup.com/nar/article-pdf/48/D1/D58/31697342/gkz980.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/48/D1/D58/31697342/gkz980.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5024755000","display_name":"Tianshun Gao","orcid":"https://orcid.org/0000-0002-0466-9081"},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]},{"id":"https://openalex.org/I2799853436","display_name":"Johns Hopkins Medicine","ror":"https://ror.org/037zgn354","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I2799853436"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Tianshun Gao","raw_affiliation_strings":["The Wilmer Eye Institute, Johns Hopkins School of Medicine, Baltimore, MD 21231, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Wilmer Eye Institute, Johns Hopkins School of Medicine, Baltimore, MD 21231, USA","institution_ids":["https://openalex.org/I145311948","https://openalex.org/I2799853436"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100610506","display_name":"Jiang Qian","orcid":"https://orcid.org/0000-0002-0476-3596"},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]},{"id":"https://openalex.org/I2799853436","display_name":"Johns Hopkins Medicine","ror":"https://ror.org/037zgn354","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I2799853436"]},{"id":"https://openalex.org/I4210164401","display_name":"Sidney Kimmel Comprehensive Cancer Center","ror":"https://ror.org/05m5b8x20","country_code":"US","type":"facility","lineage":["https://openalex.org/I2799853436","https://openalex.org/I4210164401"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Jiang Qian","raw_affiliation_strings":["The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins School of Medicine, Baltimore, MD 21205, USA","The Wilmer Eye Institute, Johns Hopkins School of Medicine, Baltimore, MD 21231, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins School of Medicine, Baltimore, MD 21205, USA","institution_ids":["https://openalex.org/I145311948","https://openalex.org/I4210164401"]},{"raw_affiliation_string":"The Wilmer Eye Institute, Johns Hopkins School of Medicine, Baltimore, MD 21231, USA","institution_ids":["https://openalex.org/I145311948","https://openalex.org/I2799853436"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5100610506"],"corresponding_institution_ids":["https://openalex.org/I145311948","https://openalex.org/I2799853436","https://openalex.org/I4210164401"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":11.6039,"has_fulltext":false,"cited_by_count":334,"citation_normalized_percentile":{"value":0.99197527,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"48","issue":"D1","first_page":"D58","last_page":"D64"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.958271861076355},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.7931214570999146},{"id":"https://openalex.org/keywords/enhancer","display_name":"Enhancer","score":0.7308124899864197},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5443101525306702},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.48848259449005127},{"id":"https://openalex.org/keywords/cell","display_name":"Cell","score":0.4178425073623657},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.32830122113227844},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3198823928833008},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.13148698210716248},{"id":"https://openalex.org/keywords/transcription-factor","display_name":"Transcription factor","score":0.10649925470352173},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.06548768281936646}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.958271861076355},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.7931214570999146},{"id":"https://openalex.org/C111936080","wikidata":"https://www.wikidata.org/wiki/Q913367","display_name":"Enhancer","level":4,"score":0.7308124899864197},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5443101525306702},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.48848259449005127},{"id":"https://openalex.org/C1491633281","wikidata":"https://www.wikidata.org/wiki/Q7868","display_name":"Cell","level":2,"score":0.4178425073623657},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.32830122113227844},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3198823928833008},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.13148698210716248},{"id":"https://openalex.org/C86339819","wikidata":"https://www.wikidata.org/wiki/Q407384","display_name":"Transcription factor","level":3,"score":0.10649925470352173},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.06548768281936646},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004742","descriptor_name":"Enhancer Elements, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004742","descriptor_name":"Enhancer Elements, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004742","descriptor_name":"Enhancer Elements, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013045","descriptor_name":"Species Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013045","descriptor_name":"Species Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013045","descriptor_name":"Species Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gkz980","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkz980","pdf_url":"https://academic.oup.com/nar/article-pdf/48/D1/D58/31697342/gkz980.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:31740966","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31740966","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:7145677","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7145677","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkz980","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkz980","pdf_url":"https://academic.oup.com/nar/article-pdf/48/D1/D58/31697342/gkz980.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3844016039","display_name":null,"funder_award_id":"EY024580","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G5248301874","display_name":null,"funder_award_id":"EY029548","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G5992631789","display_name":null,"funder_award_id":"EY001765","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G861727699","display_name":null,"funder_award_id":"GM111514","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":54,"referenced_works":["https://openalex.org/W1965425724","https://openalex.org/W1966921801","https://openalex.org/W1973062929","https://openalex.org/W1981030303","https://openalex.org/W1997590968","https://openalex.org/W2011463791","https://openalex.org/W2014787267","https://openalex.org/W2015845481","https://openalex.org/W2023386301","https://openalex.org/W2026027175","https://openalex.org/W2033201031","https://openalex.org/W2033904805","https://openalex.org/W2049361027","https://openalex.org/W2076154138","https://openalex.org/W2077874719","https://openalex.org/W2087093185","https://openalex.org/W2102619694","https://openalex.org/W2107649894","https://openalex.org/W2113974339","https://openalex.org/W2118258530","https://openalex.org/W2137704220","https://openalex.org/W2139742502","https://openalex.org/W2146256775","https://openalex.org/W2168191908","https://openalex.org/W2168602111","https://openalex.org/W2171681733","https://openalex.org/W2171808845","https://openalex.org/W2176574121","https://openalex.org/W2178688380","https://openalex.org/W2514270659","https://openalex.org/W2521169638","https://openalex.org/W2530257681","https://openalex.org/W2559028527","https://openalex.org/W2602000457","https://openalex.org/W2606675097","https://openalex.org/W2765331947","https://openalex.org/W2766648240","https://openalex.org/W2767199852","https://openalex.org/W2767826728","https://openalex.org/W2770178180","https://openalex.org/W2810164974","https://openalex.org/W2887464963","https://openalex.org/W2892479680","https://openalex.org/W2898942820","https://openalex.org/W2899616402","https://openalex.org/W2908497471","https://openalex.org/W2914398292","https://openalex.org/W2915985519","https://openalex.org/W2950599556","https://openalex.org/W2982376588","https://openalex.org/W3136918052","https://openalex.org/W4210347168","https://openalex.org/W4232154957","https://openalex.org/W4233310067"],"related_works":["https://openalex.org/W2113330652","https://openalex.org/W2361861616","https://openalex.org/W2061914098","https://openalex.org/W2263699433","https://openalex.org/W2377979023","https://openalex.org/W4393004084","https://openalex.org/W2218034408","https://openalex.org/W2392921965","https://openalex.org/W2118646732","https://openalex.org/W4387565139"],"abstract_inverted_index":{"Enhancers":[0],"are":[1],"distal":[2],"cis-regulatory":[3],"elements":[4],"that":[5,71],"activate":[6],"the":[7,92,130,136,154,170],"transcription":[8],"of":[9,18,76,129,173,186],"their":[10],"target":[11],"genes.":[12],"They":[13],"regulate":[14],"a":[15,40,73,126],"wide":[16],"range":[17],"important":[19],"biological":[20],"functions":[21],"and":[22,27,31,82,120,151,159],"processes,":[23],"including":[24],"embryogenesis,":[25],"development,":[26],"homeostasis.":[28],"As":[29],"more":[30,32],"large-scale":[33],"technologies":[34],"were":[35,100],"developed":[36],"for":[37,46],"enhancer":[38,47],"identification,":[39],"comprehensive":[41],"database":[42,63,93],"is":[43,125],"highly":[44],"desirable":[45],"annotation":[48,172],"based":[49],"on":[50],"various":[51,189],"genome-wide":[52],"profiling":[53],"datasets":[54,105],"across":[55,88],"different":[56,85],"species.":[57,90],"Here,":[58],"we":[59,143],"present":[60],"an":[61],"updated":[62,123],"EnhancerAtlas":[64,176],"2.0":[65,177],"(http://www.enhanceratlas.org/indexv2.php),":[66],"covering":[67],"586":[68],"tissue/cell":[69],"types":[70],"include":[72],"large":[74],"number":[75],"normal":[77],"tissues,":[78],"cancer":[79],"cell":[80],"lines,":[81],"cells":[83],"at":[84],"development":[86],"stages":[87],"nine":[89],"Overall,":[91],"contains":[94,135],"13":[95],"494":[96],"603":[97],"enhancers,":[98],"which":[99,133],"obtained":[101],"from":[102],"16":[103],"055":[104],"using":[106],"12":[107],"high-throughput":[108],"experiment":[109],"methods":[110],"(e.g.":[111],"H3K4me1/H3K27ac,":[112],"DNase-seq/ATAC-seq,":[113],"P300,":[114],"POLR2A,":[115],"CAGE,":[116],"ChIA-PET,":[117],"GRO-seq,":[118],"STARR-seq":[119],"MPRA).":[121],"The":[122],"version":[124],"huge":[127],"expansion":[128],"first":[131],"version,":[132],"only":[134],"enhancers":[137,158,174,187],"in":[138,148,175,188],"human":[139],"cells.":[140],"In":[141],"addition,":[142],"predicted":[144],"enhancer-target":[145,160],"gene":[146,161],"relationships":[147,162],"human,":[149],"mouse":[150],"fly.":[152],"Finally,":[153],"users":[155,180],"can":[156],"search":[157],"through":[163],"five":[164],"user-friendly,":[165],"interactive":[166],"modules.":[167],"We":[168],"believe":[169],"new":[171],"will":[178],"facilitate":[179],"to":[181],"perform":[182],"useful":[183],"functional":[184],"analysis":[185],"genomes.":[190]},"counts_by_year":[{"year":2026,"cited_by_count":5},{"year":2025,"cited_by_count":51},{"year":2024,"cited_by_count":56},{"year":2023,"cited_by_count":69},{"year":2022,"cited_by_count":57},{"year":2021,"cited_by_count":68},{"year":2020,"cited_by_count":27},{"year":2019,"cited_by_count":1}],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2025-10-10T00:00:00"}