{"id":"https://openalex.org/W2982659388","doi":"https://doi.org/10.1093/nar/gkz974","title":"ProteomicsDB: a multi-omics and multi-organism resource for life science research","display_name":"ProteomicsDB: a multi-omics and multi-organism resource for life science research","publication_year":2019,"publication_date":"2019-10-15","ids":{"openalex":"https://openalex.org/W2982659388","doi":"https://doi.org/10.1093/nar/gkz974","mag":"2982659388","pmid":"https://pubmed.ncbi.nlm.nih.gov/31665479"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkz974","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkz974","pdf_url":"https://academic.oup.com/nar/article-pdf/48/D1/D1153/31697152/gkz974.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/48/D1/D1153/31697152/gkz974.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5022128097","display_name":"Patroklos Samaras","orcid":"https://orcid.org/0000-0001-6042-1585"},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Patroklos Samaras","raw_affiliation_strings":["Chair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Bavaria, Germany"],"raw_orcid":"https://orcid.org/0000-0001-6042-1585","affiliations":[{"raw_affiliation_string":"Chair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Bavaria, Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090219745","display_name":"Tobias Schmidt","orcid":"https://orcid.org/0000-0002-1883-6514"},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Tobias Schmidt","raw_affiliation_strings":["Chair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Bavaria, Germany"],"raw_orcid":"https://orcid.org/0000-0002-1883-6514","affiliations":[{"raw_affiliation_string":"Chair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Bavaria, Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070227121","display_name":"Martin Frejno","orcid":"https://orcid.org/0000-0002-6651-1773"},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Martin Frejno","raw_affiliation_strings":["Chair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Bavaria, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Bavaria, Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086061569","display_name":"Siegfried Gessulat","orcid":"https://orcid.org/0000-0001-5530-0674"},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Siegfried Gessulat","raw_affiliation_strings":["Chair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Bavaria, Germany","Innovation Center Network, SAP SE, Potsdam, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Bavaria, Germany","institution_ids":["https://openalex.org/I62916508"]},{"raw_affiliation_string":"Innovation Center Network, SAP SE, Potsdam, Germany","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087347408","display_name":"Maria Reinecke","orcid":"https://orcid.org/0000-0002-1008-408X"},"institutions":[{"id":"https://openalex.org/I17937529","display_name":"German Cancer Research Center","ror":"https://ror.org/04cdgtt98","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I17937529"]},{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]},{"id":"https://openalex.org/I4391767962","display_name":"Deutschen Konsortium f\u00fcr Translationale Krebsforschung","ror":"https://ror.org/02pqn3g31","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4391767962","https://openalex.org/I4405256427"]},{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Maria Reinecke","raw_affiliation_strings":["Chair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Bavaria, Germany","German Cancer Consortium (DKTK), Partner Site Munich, Munich, Germany","German Cancer Research Center (DKFZ), Heidelberg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Bavaria, Germany","institution_ids":["https://openalex.org/I62916508"]},{"raw_affiliation_string":"German Cancer Consortium (DKTK), Partner Site Munich, Munich, Germany","institution_ids":["https://openalex.org/I4391767962"]},{"raw_affiliation_string":"German Cancer Research Center (DKFZ), Heidelberg, Germany","institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082220050","display_name":"Anna Jarz\u0105b","orcid":"https://orcid.org/0000-0002-1059-9147"},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Anna Jarzab","raw_affiliation_strings":["Chair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Bavaria, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Bavaria, Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057858978","display_name":"Jana Zecha","orcid":"https://orcid.org/0000-0002-8767-6294"},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Jana Zecha","raw_affiliation_strings":["Chair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Bavaria, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Bavaria, Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039926288","display_name":"Julia Mergner","orcid":"https://orcid.org/0000-0002-4332-1280"},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Julia Mergner","raw_affiliation_strings":["Chair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Bavaria, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Bavaria, Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049947443","display_name":"Piero Giansanti","orcid":"https://orcid.org/0000-0003-2857-0841"},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Piero Giansanti","raw_affiliation_strings":["Chair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Bavaria, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Bavaria, Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072560776","display_name":"Hans\u2010Christian Ehrlich","orcid":"https://orcid.org/0000-0001-5866-5433"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hans-Christian Ehrlich","raw_affiliation_strings":["Innovation Center Network, SAP SE, Potsdam, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Innovation Center Network, SAP SE, Potsdam, Germany","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090426653","display_name":"Stephan Aiche","orcid":"https://orcid.org/0000-0001-9601-8229"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Stephan Aiche","raw_affiliation_strings":["Innovation Center Network, SAP SE, Potsdam, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Innovation Center Network, SAP SE, Potsdam, Germany","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048708450","display_name":"Johannes Rank","orcid":null},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Johannes Rank","raw_affiliation_strings":["Chair for Information Systems, Technical University of Munich (TUM), Garching, Germany","SAP University Competence Center, Technical University of Munich (TUM), Garching, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chair for Information Systems, Technical University of Munich (TUM), Garching, Germany","institution_ids":["https://openalex.org/I62916508"]},{"raw_affiliation_string":"SAP University Competence Center, Technical University of Munich (TUM), Garching, Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076252787","display_name":"Harald Kienegger","orcid":null},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Harald Kienegger","raw_affiliation_strings":["Chair for Information Systems, Technical University of Munich (TUM), Garching, Germany","SAP University Competence Center, Technical University of Munich (TUM), Garching, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chair for Information Systems, Technical University of Munich (TUM), Garching, Germany","institution_ids":["https://openalex.org/I62916508"]},{"raw_affiliation_string":"SAP University Competence Center, Technical University of Munich (TUM), Garching, Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077586272","display_name":"Helmut Krcmar","orcid":"https://orcid.org/0000-0002-2754-8493"},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Helmut Krcmar","raw_affiliation_strings":["Chair for Information Systems, Technical University of Munich (TUM), Garching, Germany","SAP University Competence Center, Technical University of Munich (TUM), Garching, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chair for Information Systems, Technical University of Munich (TUM), Garching, Germany","institution_ids":["https://openalex.org/I62916508"]},{"raw_affiliation_string":"SAP University Competence Center, Technical University of Munich (TUM), Garching, Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058082024","display_name":"Bernhard K\u00fcster","orcid":"https://orcid.org/0000-0002-9094-1677"},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Bernhard Kuster","raw_affiliation_strings":["Bavarian Biomolecular Mass Spectrometry Center (BayBioMS), Technical University of Munich (TUM), Freising, Bavaria, Germany","Chair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Bavaria, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bavarian Biomolecular Mass Spectrometry Center (BayBioMS), Technical University of Munich (TUM), Freising, Bavaria, Germany","institution_ids":["https://openalex.org/I62916508"]},{"raw_affiliation_string":"Chair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Bavaria, Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5031508585","display_name":"Mathias Wilhelm","orcid":"https://orcid.org/0000-0002-9224-3258"},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Mathias Wilhelm","raw_affiliation_strings":["Chair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Bavaria, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Bavaria, Germany","institution_ids":["https://openalex.org/I62916508"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":16,"corresponding_author_ids":["https://openalex.org/A5031508585","https://openalex.org/A5058082024"],"corresponding_institution_ids":["https://openalex.org/I62916508"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":14.3778,"has_fulltext":false,"cited_by_count":200,"citation_normalized_percentile":{"value":0.99562156,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"48","issue":"D1","first_page":"D1153","last_page":"D1163"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/upload","display_name":"Upload","score":0.8903195858001709},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5976386070251465},{"id":"https://openalex.org/keywords/proteomics","display_name":"Proteomics","score":0.5475852489471436},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.5236617922782898},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.4823986291885376},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.48094290494918823},{"id":"https://openalex.org/keywords/biological-data","display_name":"Biological data","score":0.437202513217926},{"id":"https://openalex.org/keywords/service","display_name":"Service (business)","score":0.4315696954727173},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.43076834082603455},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4196323752403259},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.41547682881355286},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3503642976284027},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.32822006940841675},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.2576950192451477},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.2158321738243103},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.08952188491821289}],"concepts":[{"id":"https://openalex.org/C71901391","wikidata":"https://www.wikidata.org/wiki/Q7126699","display_name":"Upload","level":2,"score":0.8903195858001709},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5976386070251465},{"id":"https://openalex.org/C46111723","wikidata":"https://www.wikidata.org/wiki/Q471857","display_name":"Proteomics","level":3,"score":0.5475852489471436},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.5236617922782898},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.4823986291885376},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.48094290494918823},{"id":"https://openalex.org/C201797286","wikidata":"https://www.wikidata.org/wiki/Q4914986","display_name":"Biological data","level":2,"score":0.437202513217926},{"id":"https://openalex.org/C2780378061","wikidata":"https://www.wikidata.org/wiki/Q25351891","display_name":"Service (business)","level":2,"score":0.4315696954727173},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.43076834082603455},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4196323752403259},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.41547682881355286},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3503642976284027},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.32822006940841675},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.2576950192451477},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.2158321738243103},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.08952188491821289},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0},{"id":"https://openalex.org/C136264566","wikidata":"https://www.wikidata.org/wiki/Q159810","display_name":"Economy","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D001690","descriptor_name":"Biological Science Disciplines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001690","descriptor_name":"Biological Science Disciplines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001690","descriptor_name":"Biological Science Disciplines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012106","descriptor_name":"Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012106","descriptor_name":"Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012106","descriptor_name":"Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1093/nar/gkz974","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkz974","pdf_url":"https://academic.oup.com/nar/article-pdf/48/D1/D1153/31697152/gkz974.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:31665479","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31665479","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:mediatum.ub.tum.de:node/1523213","is_oa":true,"landing_page_url":"http://mediatum.ub.tum.de/node?id=1523213","pdf_url":null,"source":{"id":"https://openalex.org/S4377196330","display_name":"mediaTUM  (Technical University of Munich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I62916508","host_organization_name":"Technical University of Munich","host_organization_lineage":["https://openalex.org/I62916508"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"article"},{"id":"pmh:oai:mediatum.ub.tum.de:node/1602284","is_oa":true,"landing_page_url":"https://mediatum.ub.tum.de/1602284","pdf_url":null,"source":{"id":"https://openalex.org/S4377196330","display_name":"mediaTUM  (Technical University of Munich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I62916508","host_organization_name":"Technical University of Munich","host_organization_lineage":["https://openalex.org/I62916508"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"article"},{"id":"pmh:oai:mediatum.ub.tum.de:node/1617071","is_oa":false,"landing_page_url":"https://mediatum.ub.tum.de/1617071","pdf_url":null,"source":{"id":"https://openalex.org/S4377196330","display_name":"mediaTUM  (Technical University of Munich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I62916508","host_organization_name":"Technical University of Munich","host_organization_lineage":["https://openalex.org/I62916508"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"article"},{"id":"pmh:oai:mediatum.ub.tum.de:node/1652407","is_oa":false,"landing_page_url":"https://mediatum.ub.tum.de/1652407","pdf_url":null,"source":{"id":"https://openalex.org/S4377196330","display_name":"mediaTUM  (Technical University of Munich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I62916508","host_organization_name":"Technical University of Munich","host_organization_lineage":["https://openalex.org/I62916508"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:7145565","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7145565","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkz974","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkz974","pdf_url":"https://academic.oup.com/nar/article-pdf/48/D1/D1153/31697152/gkz974.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.46000000834465027,"id":"https://metadata.un.org/sdg/12","display_name":"Responsible consumption and production"}],"awards":[{"id":"https://openalex.org/G355920368","display_name":null,"funder_award_id":"031L0008A","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"},{"id":"https://openalex.org/G8104252070","display_name":null,"funder_award_id":"031L0168","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"}],"funders":[{"id":"https://openalex.org/F4320321114","display_name":"Bundesministerium f\u00fcr Bildung und Forschung","ror":"https://ror.org/04pz7b180"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2982659388.pdf","grobid_xml":"https://content.openalex.org/works/W2982659388.grobid-xml"},"referenced_works_count":42,"referenced_works":["https://openalex.org/W299686445","https://openalex.org/W1986849266","https://openalex.org/W1992014004","https://openalex.org/W1996822667","https://openalex.org/W2001513662","https://openalex.org/W2043398720","https://openalex.org/W2066560754","https://openalex.org/W2069860553","https://openalex.org/W2107665951","https://openalex.org/W2108508103","https://openalex.org/W2122825543","https://openalex.org/W2128386749","https://openalex.org/W2131321938","https://openalex.org/W2153349010","https://openalex.org/W2159482845","https://openalex.org/W2220553089","https://openalex.org/W2302501749","https://openalex.org/W2461427403","https://openalex.org/W2474747771","https://openalex.org/W2535482197","https://openalex.org/W2557110550","https://openalex.org/W2557833574","https://openalex.org/W2580819151","https://openalex.org/W2618054076","https://openalex.org/W2753758700","https://openalex.org/W2761688050","https://openalex.org/W2765187412","https://openalex.org/W2773242491","https://openalex.org/W2773787581","https://openalex.org/W2789810162","https://openalex.org/W2791501381","https://openalex.org/W2807369168","https://openalex.org/W2900569176","https://openalex.org/W2947763854","https://openalex.org/W2948474279","https://openalex.org/W2950403988","https://openalex.org/W2951294297","https://openalex.org/W2966702937","https://openalex.org/W3136918052","https://openalex.org/W4233863423","https://openalex.org/W4256316091","https://openalex.org/W4294216483"],"related_works":["https://openalex.org/W2013728941","https://openalex.org/W4225274103","https://openalex.org/W2154046714","https://openalex.org/W2189613078","https://openalex.org/W2579659702","https://openalex.org/W2923661510","https://openalex.org/W1574055964","https://openalex.org/W1965329638","https://openalex.org/W2542318691","https://openalex.org/W3160708108"],"abstract_inverted_index":{"ProteomicsDB":[0,89,134,188],"(https://www.ProteomicsDB.org)":[1],"started":[2],"as":[3,170,172],"a":[4,130],"protein-centric":[5],"in-memory":[6],"database":[7],"for":[8,117],"the":[9,48,61,68,76,92,108,118,165,173],"exploration":[10],"of":[11,14,96,111,161,187],"large":[12],"collections":[13],"quantitative":[15],"mass":[16],"spectrometry-based":[17],"proteomics":[18],"data.":[19,39,82],"The":[20],"data":[21,69,97,149],"types":[22],"and":[23,35,74,94,144],"contents":[24],"grew":[25],"over":[26],"time":[27],"to":[28,78,107,124,138,158,182],"include":[29],"RNA-Seq":[30],"expression":[31,142],"data,":[32],"drug-target":[33],"interactions":[34],"cell":[36],"line":[37],"viability":[38],"In":[40],"this":[41,162,190],"manuscript,":[42],"we":[43,65,128],"summarize":[44],"new":[45,85,131],"developments":[46],"since":[47],"previous":[49],"update":[50],"that":[51,88],"was":[52],"published":[53],"in":[54,58,133,151,164,189],"Nucleic":[55],"Acids":[56],"Research":[57],"2017.":[59],"Over":[60],"past":[62],"two":[63],"years,":[64],"have":[66],"enriched":[67],"content":[70],"by":[71,103],"additional":[72],"datasets":[73,143],"extended":[75],"platform":[77],"support":[79],"protein":[80],"turnover":[81],"Another":[83],"important":[84],"addition":[86],"is":[87],"now":[90],"supports":[91],"storage":[93],"visualization":[95],"collected":[98],"from":[99],"other":[100,125],"organisms,":[101],"exemplified":[102],"Arabidopsis":[104],"thaliana.":[105],"Due":[106],"generic":[109],"design":[110],"ProteomicsDB,":[112],"all":[113,184],"analytical":[114,185],"features":[115,186],"available":[116],"original":[119],"human":[120],"resource":[121],"seamlessly":[122],"transfer":[123],"organisms.":[126],"Furthermore,":[127],"introduce":[129],"service":[132],"which":[135],"allows":[136],"users":[137,154],"upload":[139],"their":[140],"own":[141],"analyze":[145],"them":[146],"alongside":[147],"with":[148],"stored":[150],"ProteomicsDB.":[152],"Initially,":[153],"will":[155,179],"be":[156,180],"able":[157,181],"make":[159],"use":[160,183],"feature":[163],"interactive":[166],"heat":[167],"map":[168],"functionality":[169],"well":[171],"drug":[174],"sensitivity":[175],"prediction,":[176],"but":[177],"ultimately":[178],"way.":[191]},"counts_by_year":[{"year":2026,"cited_by_count":5},{"year":2025,"cited_by_count":17},{"year":2024,"cited_by_count":20},{"year":2023,"cited_by_count":42},{"year":2022,"cited_by_count":40},{"year":2021,"cited_by_count":51},{"year":2020,"cited_by_count":23},{"year":2019,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
