{"id":"https://openalex.org/W2982524423","doi":"https://doi.org/10.1093/nar/gkz953","title":"MaGenDB: a functional genomics hub for Malvaceae plants","display_name":"MaGenDB: a functional genomics hub for Malvaceae plants","publication_year":2019,"publication_date":"2019-10-10","ids":{"openalex":"https://openalex.org/W2982524423","doi":"https://doi.org/10.1093/nar/gkz953","mag":"2982524423","pmid":"https://pubmed.ncbi.nlm.nih.gov/31665439"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkz953","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkz953","pdf_url":"https://academic.oup.com/nar/article-pdf/48/D1/D1076/31697490/gkz953.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/48/D1/D1076/31697490/gkz953.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101676175","display_name":"Dehe Wang","orcid":"https://orcid.org/0000-0002-9465-0957"},"institutions":[{"id":"https://openalex.org/I37461747","display_name":"Wuhan University","ror":"https://ror.org/033vjfk17","country_code":"CN","type":"education","lineage":["https://openalex.org/I37461747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Dehe Wang","raw_affiliation_strings":["College of Life Sciences, Wuhan University, Wuhan\u00a0430072, China","State Key Laboratory of Virology, Wuhan University, Wuhan\u00a0430072, China"],"affiliations":[{"raw_affiliation_string":"College of Life Sciences, Wuhan University, Wuhan\u00a0430072, China","institution_ids":["https://openalex.org/I37461747"]},{"raw_affiliation_string":"State Key Laboratory of Virology, Wuhan University, Wuhan\u00a0430072, China","institution_ids":["https://openalex.org/I37461747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060450630","display_name":"Weiliang Fan","orcid":"https://orcid.org/0000-0003-4570-7686"},"institutions":[{"id":"https://openalex.org/I37461747","display_name":"Wuhan University","ror":"https://ror.org/033vjfk17","country_code":"CN","type":"education","lineage":["https://openalex.org/I37461747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Weiliang Fan","raw_affiliation_strings":["College of Life Sciences, Wuhan University, Wuhan\u00a0430072, China"],"affiliations":[{"raw_affiliation_string":"College of Life Sciences, Wuhan University, Wuhan\u00a0430072, China","institution_ids":["https://openalex.org/I37461747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050355193","display_name":"Xiaolong Guo","orcid":"https://orcid.org/0000-0001-6624-1219"},"institutions":[{"id":"https://openalex.org/I37461747","display_name":"Wuhan University","ror":"https://ror.org/033vjfk17","country_code":"CN","type":"education","lineage":["https://openalex.org/I37461747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaolong Guo","raw_affiliation_strings":["College of Life Sciences, Wuhan University, Wuhan\u00a0430072, China","State Key Laboratory of Virology, Wuhan University, Wuhan\u00a0430072, China"],"affiliations":[{"raw_affiliation_string":"College of Life Sciences, Wuhan University, Wuhan\u00a0430072, China","institution_ids":["https://openalex.org/I37461747"]},{"raw_affiliation_string":"State Key Laboratory of Virology, Wuhan University, Wuhan\u00a0430072, China","institution_ids":["https://openalex.org/I37461747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101529497","display_name":"Kai Wu","orcid":"https://orcid.org/0000-0003-4855-5147"},"institutions":[{"id":"https://openalex.org/I37461747","display_name":"Wuhan University","ror":"https://ror.org/033vjfk17","country_code":"CN","type":"education","lineage":["https://openalex.org/I37461747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Kai Wu","raw_affiliation_strings":["College of Life Sciences, Wuhan University, Wuhan\u00a0430072, China","State Key Laboratory of Virology, Wuhan University, Wuhan\u00a0430072, China"],"affiliations":[{"raw_affiliation_string":"College of Life Sciences, Wuhan University, Wuhan\u00a0430072, China","institution_ids":["https://openalex.org/I37461747"]},{"raw_affiliation_string":"State Key Laboratory of Virology, Wuhan University, Wuhan\u00a0430072, China","institution_ids":["https://openalex.org/I37461747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101976349","display_name":"Siyu Zhou","orcid":"https://orcid.org/0000-0003-4638-4137"},"institutions":[{"id":"https://openalex.org/I16609230","display_name":"Hunan University","ror":"https://ror.org/05htk5m33","country_code":"CN","type":"education","lineage":["https://openalex.org/I16609230"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Siyu Zhou","raw_affiliation_strings":["College of Information Science and Engineering, Hunan University, Changsha 410082, China"],"affiliations":[{"raw_affiliation_string":"College of Information Science and Engineering, Hunan University, Changsha 410082, China","institution_ids":["https://openalex.org/I16609230"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057920563","display_name":"Zonggui Chen","orcid":"https://orcid.org/0000-0003-3346-2765"},"institutions":[{"id":"https://openalex.org/I37461747","display_name":"Wuhan University","ror":"https://ror.org/033vjfk17","country_code":"CN","type":"education","lineage":["https://openalex.org/I37461747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zonggui Chen","raw_affiliation_strings":["Institute for Advanced Studies, Wuhan University, Wuhan 430072, China"],"affiliations":[{"raw_affiliation_string":"Institute for Advanced Studies, Wuhan University, Wuhan 430072, China","institution_ids":["https://openalex.org/I37461747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100453912","display_name":"Danyang Li","orcid":"https://orcid.org/0000-0003-2543-3008"},"institutions":[{"id":"https://openalex.org/I37461747","display_name":"Wuhan University","ror":"https://ror.org/033vjfk17","country_code":"CN","type":"education","lineage":["https://openalex.org/I37461747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Danyang Li","raw_affiliation_strings":["College of Life Sciences, Wuhan University, Wuhan\u00a0430072, China"],"affiliations":[{"raw_affiliation_string":"College of Life Sciences, Wuhan University, Wuhan\u00a0430072, China","institution_ids":["https://openalex.org/I37461747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065145414","display_name":"Kun Wang","orcid":"https://orcid.org/0000-0001-5910-1568"},"institutions":[{"id":"https://openalex.org/I37461747","display_name":"Wuhan University","ror":"https://ror.org/033vjfk17","country_code":"CN","type":"education","lineage":["https://openalex.org/I37461747"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Kun Wang","raw_affiliation_strings":["College of Life Sciences, Wuhan University, Wuhan\u00a0430072, China"],"affiliations":[{"raw_affiliation_string":"College of Life Sciences, Wuhan University, Wuhan\u00a0430072, China","institution_ids":["https://openalex.org/I37461747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025930783","display_name":"Yuxian Zhu","orcid":"https://orcid.org/0000-0003-2371-5933"},"institutions":[{"id":"https://openalex.org/I37461747","display_name":"Wuhan University","ror":"https://ror.org/033vjfk17","country_code":"CN","type":"education","lineage":["https://openalex.org/I37461747"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yuxian Zhu","raw_affiliation_strings":["College of Life Sciences, Wuhan University, Wuhan\u00a0430072, China","Institute for Advanced Studies, Wuhan University, Wuhan 430072, China"],"affiliations":[{"raw_affiliation_string":"College of Life Sciences, Wuhan University, Wuhan\u00a0430072, China","institution_ids":["https://openalex.org/I37461747"]},{"raw_affiliation_string":"Institute for Advanced Studies, Wuhan University, Wuhan 430072, China","institution_ids":["https://openalex.org/I37461747"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5006208781","display_name":"Yu Zhou","orcid":"https://orcid.org/0000-0002-2102-9377"},"institutions":[{"id":"https://openalex.org/I37461747","display_name":"Wuhan University","ror":"https://ror.org/033vjfk17","country_code":"CN","type":"education","lineage":["https://openalex.org/I37461747"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yu Zhou","raw_affiliation_strings":["College of Life Sciences, Wuhan University, Wuhan\u00a0430072, China","Institute for Advanced Studies, Wuhan University, Wuhan 430072, China","State Key Laboratory of Virology, Wuhan University, Wuhan\u00a0430072, China"],"affiliations":[{"raw_affiliation_string":"College of Life Sciences, Wuhan University, Wuhan\u00a0430072, China","institution_ids":["https://openalex.org/I37461747"]},{"raw_affiliation_string":"Institute for Advanced Studies, Wuhan University, Wuhan 430072, China","institution_ids":["https://openalex.org/I37461747"]},{"raw_affiliation_string":"State Key Laboratory of Virology, Wuhan University, Wuhan\u00a0430072, China","institution_ids":["https://openalex.org/I37461747"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5006208781","https://openalex.org/A5025930783","https://openalex.org/A5065145414"],"corresponding_institution_ids":["https://openalex.org/I37461747"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":1.8831,"has_fulltext":true,"cited_by_count":41,"citation_normalized_percentile":{"value":0.86435937,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"48","issue":"D1","first_page":"D1076","last_page":"D1084"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13069","display_name":"Cocoa and Sweet Potato Agronomy","score":0.9883000254631042,"subfield":{"id":"https://openalex.org/subfields/1108","display_name":"Horticulture"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11750","display_name":"Phytoplasmas and Hemiptera pathogens","score":0.9674000144004822,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8640238046646118},{"id":"https://openalex.org/keywords/functional-genomics","display_name":"Functional genomics","score":0.7634017467498779},{"id":"https://openalex.org/keywords/kegg","display_name":"KEGG","score":0.7406957745552063},{"id":"https://openalex.org/keywords/malvaceae","display_name":"Malvaceae","score":0.6959958672523499},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.6534439921379089},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.628183126449585},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5300965905189514},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.5236896276473999},{"id":"https://openalex.org/keywords/gene-ontology","display_name":"Gene ontology","score":0.46275827288627625},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.32872724533081055},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.16606789827346802},{"id":"https://openalex.org/keywords/botany","display_name":"Botany","score":0.15458542108535767}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8640238046646118},{"id":"https://openalex.org/C161078062","wikidata":"https://www.wikidata.org/wiki/Q1068690","display_name":"Functional genomics","level":5,"score":0.7634017467498779},{"id":"https://openalex.org/C152724338","wikidata":"https://www.wikidata.org/wiki/Q909442","display_name":"KEGG","level":5,"score":0.7406957745552063},{"id":"https://openalex.org/C2780659118","wikidata":"https://www.wikidata.org/wiki/Q156551","display_name":"Malvaceae","level":2,"score":0.6959958672523499},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6534439921379089},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.628183126449585},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5300965905189514},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.5236896276473999},{"id":"https://openalex.org/C2987395477","wikidata":"https://www.wikidata.org/wiki/Q135085","display_name":"Gene ontology","level":4,"score":0.46275827288627625},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.32872724533081055},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.16606789827346802},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.15458542108535767}],"mesh":[{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019660","descriptor_name":"Malvaceae","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D019660","descriptor_name":"Malvaceae","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D019660","descriptor_name":"Malvaceae","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D019660","descriptor_name":"Malvaceae","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019660","descriptor_name":"Malvaceae","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019660","descriptor_name":"Malvaceae","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gkz953","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkz953","pdf_url":"https://academic.oup.com/nar/article-pdf/48/D1/D1076/31697490/gkz953.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:31665439","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31665439","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:7145696","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7145696","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkz953","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkz953","pdf_url":"https://academic.oup.com/nar/article-pdf/48/D1/D1076/31697490/gkz953.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Life in Land","score":0.6399999856948853,"id":"https://metadata.un.org/sdg/15"}],"awards":[{"id":"https://openalex.org/G1121271761","display_name":null,"funder_award_id":"Program","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G1670059643","display_name":null,"funder_award_id":"31670827","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2087396116","display_name":null,"funder_award_id":"China","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2870525900","display_name":null,"funder_award_id":"Wuhan","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2938655217","display_name":null,"funder_award_id":"31770310","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3257192404","display_name":null,"funder_award_id":"91640115","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3317480652","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5994120800","display_name":null,"funder_award_id":"Natural","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6331027661","display_name":null,"funder_award_id":"2042017kf0233","funder_id":"https://openalex.org/F4320324116","funder_display_name":"Wuhan University"},{"id":"https://openalex.org/G6886231297","display_name":null,"funder_award_id":"2042017kf023","funder_id":"https://openalex.org/F4320324116","funder_display_name":"Wuhan University"},{"id":"https://openalex.org/G720370105","display_name":null,"funder_award_id":"2017YFA0504400","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G7428242387","display_name":null,"funder_award_id":"31670","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7435593655","display_name":null,"funder_award_id":"31690090","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8218031721","display_name":null,"funder_award_id":"2017YFA","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320324116","display_name":"Wuhan University","ror":"https://ror.org/033vjfk17"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2982524423.pdf","grobid_xml":"https://content.openalex.org/works/W2982524423.grobid-xml"},"referenced_works_count":61,"referenced_works":["https://openalex.org/W1864021403","https://openalex.org/W1976182511","https://openalex.org/W1998000745","https://openalex.org/W2001338440","https://openalex.org/W2004149738","https://openalex.org/W2019158910","https://openalex.org/W2020134788","https://openalex.org/W2027974246","https://openalex.org/W2029849110","https://openalex.org/W2033611197","https://openalex.org/W2036897871","https://openalex.org/W2044363505","https://openalex.org/W2048194168","https://openalex.org/W2092779913","https://openalex.org/W2101291993","https://openalex.org/W2103441770","https://openalex.org/W2112814753","https://openalex.org/W2114083522","https://openalex.org/W2122846880","https://openalex.org/W2131374955","https://openalex.org/W2133579817","https://openalex.org/W2139306346","https://openalex.org/W2142678478","https://openalex.org/W2144177541","https://openalex.org/W2144430955","https://openalex.org/W2145100181","https://openalex.org/W2149640650","https://openalex.org/W2162098634","https://openalex.org/W2166152751","https://openalex.org/W2167155938","https://openalex.org/W2167737093","https://openalex.org/W2169456326","https://openalex.org/W2171808845","https://openalex.org/W2336957559","https://openalex.org/W2393535458","https://openalex.org/W2510875395","https://openalex.org/W2529072821","https://openalex.org/W2533355719","https://openalex.org/W2537132940","https://openalex.org/W2537623931","https://openalex.org/W2559191318","https://openalex.org/W2609207099","https://openalex.org/W2622014095","https://openalex.org/W2764305907","https://openalex.org/W2765380711","https://openalex.org/W2766848373","https://openalex.org/W2767826728","https://openalex.org/W2800524954","https://openalex.org/W2803051581","https://openalex.org/W2804822363","https://openalex.org/W2806399642","https://openalex.org/W2806884808","https://openalex.org/W2898402099","https://openalex.org/W2900359059","https://openalex.org/W2900629010","https://openalex.org/W2902012935","https://openalex.org/W2921474111","https://openalex.org/W2938574745","https://openalex.org/W2967528950","https://openalex.org/W2980485497","https://openalex.org/W6677611723"],"related_works":["https://openalex.org/W2360935227","https://openalex.org/W2364993072","https://openalex.org/W2115576822","https://openalex.org/W2155595079","https://openalex.org/W2356429006","https://openalex.org/W2380568150","https://openalex.org/W2385787406","https://openalex.org/W2411510900","https://openalex.org/W4362472570","https://openalex.org/W2263355832"],"abstract_inverted_index":{"Malvaceae":[0,23,81],"is":[1,53],"a":[2,60,67,117,141,153],"family":[3],"of":[4,21,41,79,105],"flowering":[5],"plants":[6],"containing":[7],"many":[8,29],"economically":[9],"important":[10],"plant":[11,73],"species":[12,24,168],"including":[13,90],"cotton,":[14],"cacao":[15],"and":[16,28,49,83,98,113,121,135,176],"durian.":[17],"Recently,":[18],"the":[19,72,77,110],"genomes":[20,78],"several":[22],"have":[25],"been":[26],"decoded,":[27],"omics":[30,107],"data":[31,108],"were":[32],"generated":[33],"for":[34,55,71,145,188],"individual":[35],"species.":[36,173],"However,":[37],"no":[38],"integrative":[39],"database":[40,62,175],"multiple":[42,123,164],"species,":[43,82],"enabling":[44],"users":[45,181],"to":[46,126,157,182],"jointly":[47],"compare":[48],"analyse":[50],"relevant":[51],"data,":[52],"available":[54],"Malvaceae.":[56],"Thus,":[57],"we":[58,151],"developed":[59],"user-friendly":[61],"named":[63],"MaGenDB":[64],"(http://magen.whu.edu.cn)":[65],"as":[66,131],"functional":[68,91,136,154,186],"genomics":[69],"hub":[70],"community.":[74],"We":[75,101,138],"collected":[76],"13":[80],"comprehensively":[84],"annotated":[85],"genes":[86,162],"from":[87],"different":[88],"perspectives":[89],"RNA/protein":[92],"element,":[93],"gene":[94,99],"ontology,":[95],"KEGG":[96],"orthology,":[97],"family.":[100],"processed":[102],"374":[103],"sets":[104],"diverse":[106],"with":[109],"ENCODE":[111],"pipelines":[112],"integrated":[114],"them":[115],"into":[116],"customised":[118],"genome":[119],"browser,":[120],"designed":[122],"dynamic":[124,132],"charts":[125],"present":[127],"gene/RNA/protein-level":[128],"knowledge":[129],"such":[130],"expression":[133],"profiles":[134],"elements.":[137],"also":[139],"implemented":[140],"smart":[142],"search":[143],"system":[144,156],"efficiently":[146],"mining":[147],"genes.":[148],"In":[149],"addition,":[150],"constructed":[152],"comparison":[155],"help":[158],"comparative":[159],"analysis":[160],"between":[161],"on":[163],"features":[165],"in":[166],"one":[167],"or":[169],"across":[170],"closely":[171],"related":[172],"This":[174],"associated":[177],"tools":[178],"will":[179],"allow":[180],"quickly":[183],"retrieve":[184],"large-scale":[185],"information":[187],"biological":[189],"discovery.":[190]},"counts_by_year":[{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":9},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":9},{"year":2021,"cited_by_count":8},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":1}],"updated_date":"2026-03-18T14:38:29.013473","created_date":"2025-10-10T00:00:00"}
