{"id":"https://openalex.org/W2944545583","doi":"https://doi.org/10.1093/nar/gkz369","title":"g:Profiler: a web server for functional enrichment analysis and conversions of gene lists (2019 update)","display_name":"g:Profiler: a web server for functional enrichment analysis and conversions of gene lists (2019 update)","publication_year":2019,"publication_date":"2019-04-30","ids":{"openalex":"https://openalex.org/W2944545583","doi":"https://doi.org/10.1093/nar/gkz369","mag":"2944545583","pmid":"https://pubmed.ncbi.nlm.nih.gov/31066453"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkz369","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkz369","pdf_url":"https://academic.oup.com/nar/article-pdf/47/W1/W191/28879887/gkz369.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/47/W1/W191/28879887/gkz369.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5088048706","display_name":"Uku Raudvere","orcid":"https://orcid.org/0000-0001-7243-8595"},"institutions":[{"id":"https://openalex.org/I56085075","display_name":"University of Tartu","ror":"https://ror.org/03z77qz90","country_code":"EE","type":"education","lineage":["https://openalex.org/I56085075"]}],"countries":["EE"],"is_corresponding":false,"raw_author_name":"Uku Raudvere","raw_affiliation_strings":["Institute of Computer Science, University of Tartu, J. Liivi 2, 50409\u00a0Tartu, Estonia"],"raw_orcid":"https://orcid.org/0000-0001-7243-8595","affiliations":[{"raw_affiliation_string":"Institute of Computer Science, University of Tartu, J. Liivi 2, 50409\u00a0Tartu, Estonia","institution_ids":["https://openalex.org/I56085075"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089817039","display_name":"Liis Kolberg","orcid":"https://orcid.org/0000-0002-0118-7562"},"institutions":[{"id":"https://openalex.org/I56085075","display_name":"University of Tartu","ror":"https://ror.org/03z77qz90","country_code":"EE","type":"education","lineage":["https://openalex.org/I56085075"]}],"countries":["EE"],"is_corresponding":false,"raw_author_name":"Liis Kolberg","raw_affiliation_strings":["Institute of Computer Science, University of Tartu, J. Liivi 2, 50409\u00a0Tartu, Estonia"],"raw_orcid":"https://orcid.org/0000-0002-0118-7562","affiliations":[{"raw_affiliation_string":"Institute of Computer Science, University of Tartu, J. Liivi 2, 50409\u00a0Tartu, Estonia","institution_ids":["https://openalex.org/I56085075"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090064487","display_name":"Ivan Kuzmin","orcid":"https://orcid.org/0000-0001-9138-9901"},"institutions":[{"id":"https://openalex.org/I56085075","display_name":"University of Tartu","ror":"https://ror.org/03z77qz90","country_code":"EE","type":"education","lineage":["https://openalex.org/I56085075"]}],"countries":["EE"],"is_corresponding":false,"raw_author_name":"Ivan Kuzmin","raw_affiliation_strings":["Institute of Computer Science, University of Tartu, J. Liivi 2, 50409\u00a0Tartu, Estonia"],"raw_orcid":"https://orcid.org/0000-0001-9138-9901","affiliations":[{"raw_affiliation_string":"Institute of Computer Science, University of Tartu, J. Liivi 2, 50409\u00a0Tartu, Estonia","institution_ids":["https://openalex.org/I56085075"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034927861","display_name":"T. V. Arak","orcid":null},"institutions":[{"id":"https://openalex.org/I56085075","display_name":"University of Tartu","ror":"https://ror.org/03z77qz90","country_code":"EE","type":"education","lineage":["https://openalex.org/I56085075"]}],"countries":["EE"],"is_corresponding":false,"raw_author_name":"Tambet Arak","raw_affiliation_strings":["Institute of Computer Science, University of Tartu, J. Liivi 2, 50409\u00a0Tartu, Estonia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Computer Science, University of Tartu, J. Liivi 2, 50409\u00a0Tartu, Estonia","institution_ids":["https://openalex.org/I56085075"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059318987","display_name":"Priit Adler","orcid":"https://orcid.org/0000-0001-8276-5135"},"institutions":[{"id":"https://openalex.org/I4210122624","display_name":"Quretec (Estonia)","ror":"https://ror.org/02ca38p84","country_code":"EE","type":"company","lineage":["https://openalex.org/I4210122624"]},{"id":"https://openalex.org/I56085075","display_name":"University of Tartu","ror":"https://ror.org/03z77qz90","country_code":"EE","type":"education","lineage":["https://openalex.org/I56085075"]}],"countries":["EE"],"is_corresponding":false,"raw_author_name":"Priit Adler","raw_affiliation_strings":["Institute of Computer Science, University of Tartu, J. Liivi 2, 50409\u00a0Tartu, Estonia","Quretec Ltd, \u00dclikooli 6a, 51003, Tartu, Estonia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Computer Science, University of Tartu, J. Liivi 2, 50409\u00a0Tartu, Estonia","institution_ids":["https://openalex.org/I56085075"]},{"raw_affiliation_string":"Quretec Ltd, \u00dclikooli 6a, 51003, Tartu, Estonia","institution_ids":["https://openalex.org/I4210122624"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089890429","display_name":"Hedi Peterson","orcid":"https://orcid.org/0000-0001-9951-5116"},"institutions":[{"id":"https://openalex.org/I4210122624","display_name":"Quretec (Estonia)","ror":"https://ror.org/02ca38p84","country_code":"EE","type":"company","lineage":["https://openalex.org/I4210122624"]},{"id":"https://openalex.org/I56085075","display_name":"University of Tartu","ror":"https://ror.org/03z77qz90","country_code":"EE","type":"education","lineage":["https://openalex.org/I56085075"]}],"countries":["EE"],"is_corresponding":true,"raw_author_name":"Hedi Peterson","raw_affiliation_strings":["Institute of Computer Science, University of Tartu, J. Liivi 2, 50409\u00a0Tartu, Estonia","Quretec Ltd, \u00dclikooli 6a, 51003, Tartu, Estonia"],"raw_orcid":"https://orcid.org/0000-0001-9951-5116","affiliations":[{"raw_affiliation_string":"Institute of Computer Science, University of Tartu, J. Liivi 2, 50409\u00a0Tartu, Estonia","institution_ids":["https://openalex.org/I56085075"]},{"raw_affiliation_string":"Quretec Ltd, \u00dclikooli 6a, 51003, Tartu, Estonia","institution_ids":["https://openalex.org/I4210122624"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5011429527","display_name":"Jaak Vilo","orcid":"https://orcid.org/0000-0001-5604-4107"},"institutions":[{"id":"https://openalex.org/I4210122624","display_name":"Quretec (Estonia)","ror":"https://ror.org/02ca38p84","country_code":"EE","type":"company","lineage":["https://openalex.org/I4210122624"]},{"id":"https://openalex.org/I4210165715","display_name":"Competence Centre on Health Technologies (Estonia)","ror":"https://ror.org/05kagrs11","country_code":"EE","type":"company","lineage":["https://openalex.org/I4210165715"]},{"id":"https://openalex.org/I56085075","display_name":"University of Tartu","ror":"https://ror.org/03z77qz90","country_code":"EE","type":"education","lineage":["https://openalex.org/I56085075"]}],"countries":["EE"],"is_corresponding":true,"raw_author_name":"Jaak Vilo","raw_affiliation_strings":["Institute of Computer Science, University of Tartu, J. Liivi 2, 50409\u00a0Tartu, Estonia","Quretec Ltd, \u00dclikooli 6a, 51003, Tartu, Estonia","Software Technology and Applications Competence Centre, \u00dclikooli 2,\u00a051003\u00a0Tartu, Estonia"],"raw_orcid":"https://orcid.org/0000-0001-5604-4107","affiliations":[{"raw_affiliation_string":"Institute of Computer Science, University of Tartu, J. Liivi 2, 50409\u00a0Tartu, Estonia","institution_ids":["https://openalex.org/I56085075"]},{"raw_affiliation_string":"Quretec Ltd, \u00dclikooli 6a, 51003, Tartu, Estonia","institution_ids":["https://openalex.org/I4210122624"]},{"raw_affiliation_string":"Software Technology and Applications Competence Centre, \u00dclikooli 2,\u00a051003\u00a0Tartu, Estonia","institution_ids":["https://openalex.org/I4210165715"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5011429527","https://openalex.org/A5089890429"],"corresponding_institution_ids":["https://openalex.org/I4210122624","https://openalex.org/I4210165715","https://openalex.org/I56085075"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":191.3575,"has_fulltext":false,"cited_by_count":5490,"citation_normalized_percentile":{"value":0.99995136,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"47","issue":"W1","first_page":"W191","last_page":"W198"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9962000250816345,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9962000250816345,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9958999752998352,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9958000183105469,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ensembl","display_name":"Ensembl","score":0.8256697654724121},{"id":"https://openalex.org/keywords/identifier","display_name":"Identifier","score":0.8199538588523865},{"id":"https://openalex.org/keywords/upload","display_name":"Upload","score":0.7617988586425781},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6832582950592041},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.47018375992774963},{"id":"https://openalex.org/keywords/user-interface","display_name":"User interface","score":0.4629574418067932},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.44050875306129456},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.4175623059272766},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3767147362232208},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.25232791900634766},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.15877589583396912},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.11970004439353943},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.09481969475746155},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.08760437369346619}],"concepts":[{"id":"https://openalex.org/C141674004","wikidata":"https://www.wikidata.org/wiki/Q1344256","display_name":"Ensembl","level":5,"score":0.8256697654724121},{"id":"https://openalex.org/C154504017","wikidata":"https://www.wikidata.org/wiki/Q853614","display_name":"Identifier","level":2,"score":0.8199538588523865},{"id":"https://openalex.org/C71901391","wikidata":"https://www.wikidata.org/wiki/Q7126699","display_name":"Upload","level":2,"score":0.7617988586425781},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6832582950592041},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.47018375992774963},{"id":"https://openalex.org/C89505385","wikidata":"https://www.wikidata.org/wiki/Q47146","display_name":"User interface","level":2,"score":0.4629574418067932},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.44050875306129456},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.4175623059272766},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3767147362232208},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.25232791900634766},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.15877589583396912},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.11970004439353943},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.09481969475746155},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.08760437369346619},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.0},{"id":"https://openalex.org/C58226133","wikidata":"https://www.wikidata.org/wiki/Q1324199","display_name":"Pulmonary surfactant","level":2,"score":0.0},{"id":"https://openalex.org/C55352822","wikidata":"https://www.wikidata.org/wiki/Q5558978","display_name":"Gibbs isotherm","level":3,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005658","descriptor_name":"Fungi","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005658","descriptor_name":"Fungi","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005658","descriptor_name":"Fungi","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005658","descriptor_name":"Fungi","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010271","descriptor_name":"Parasites","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010271","descriptor_name":"Parasites","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010271","descriptor_name":"Parasites","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010271","descriptor_name":"Parasites","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gkz369","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkz369","pdf_url":"https://academic.oup.com/nar/article-pdf/47/W1/W191/28879887/gkz369.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:31066453","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31066453","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:europepmc.org:5577260","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6602461","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:doi:10.5281/zenodo.13524167","is_oa":true,"landing_page_url":"https://zotero.org/groups/5435545/items/9Z5Y33UE","pdf_url":null,"source":{"id":"https://openalex.org/S4406922384","display_name":"Open MIND","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"JournalArticle"}],"best_oa_location":{"id":"doi:10.1093/nar/gkz369","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkz369","pdf_url":"https://academic.oup.com/nar/article-pdf/47/W1/W191/28879887/gkz369.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G6107285702","display_name":null,"funder_award_id":"2014-2020.4.01.16-0271","funder_id":"https://openalex.org/F4320335322","funder_display_name":"European Regional Development Fund"},{"id":"https://openalex.org/G7464801452","display_name":"Data Science Methods and Applications (DSMA)","funder_award_id":"IUT34-4","funder_id":"https://openalex.org/F4320321090","funder_display_name":"Eesti Teadusagentuur"}],"funders":[{"id":"https://openalex.org/F4320321090","display_name":"Eesti Teadusagentuur","ror":"https://ror.org/00jjeja18"},{"id":"https://openalex.org/F4320335322","display_name":"European Regional Development Fund","ror":"https://ror.org/00k4n6c32"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":40,"referenced_works":["https://openalex.org/W1617495083","https://openalex.org/W1935348821","https://openalex.org/W1969353942","https://openalex.org/W1989277387","https://openalex.org/W2010457001","https://openalex.org/W2012034410","https://openalex.org/W2027847170","https://openalex.org/W2061912939","https://openalex.org/W2063280109","https://openalex.org/W2100980426","https://openalex.org/W2103017472","https://openalex.org/W2124954099","https://openalex.org/W2130410032","https://openalex.org/W2135030836","https://openalex.org/W2148043260","https://openalex.org/W2156564520","https://openalex.org/W2159675211","https://openalex.org/W2163265140","https://openalex.org/W2191641478","https://openalex.org/W2345356016","https://openalex.org/W2517051411","https://openalex.org/W2537679995","https://openalex.org/W2559577985","https://openalex.org/W2611604995","https://openalex.org/W2611696724","https://openalex.org/W2767546566","https://openalex.org/W2767914218","https://openalex.org/W2793921999","https://openalex.org/W2897805491","https://openalex.org/W2901226905","https://openalex.org/W2901332105","https://openalex.org/W2910111050","https://openalex.org/W2911561283","https://openalex.org/W2917207851","https://openalex.org/W2918086501","https://openalex.org/W2949366051","https://openalex.org/W3125773275","https://openalex.org/W3136918052","https://openalex.org/W4233698560","https://openalex.org/W4243979784"],"related_works":["https://openalex.org/W2156564520","https://openalex.org/W4307843054","https://openalex.org/W2104570606","https://openalex.org/W4210430020","https://openalex.org/W4248160505","https://openalex.org/W2951946877","https://openalex.org/W2171257316","https://openalex.org/W2153768468","https://openalex.org/W1649706580","https://openalex.org/W3195608031"],"abstract_inverted_index":{"Biological":[0],"data":[1,51,71,83,162],"analysis":[2],"often":[3],"deals":[4],"with":[5],"lists":[6],"of":[7,38,160],"genes":[8],"arising":[9],"from":[10,163],"various":[11],"studies.":[12],"The":[13,36,86,105,175],"g:Profiler":[14,39,64,156,190],"toolset":[15],"is":[16,40,157,191],"widely":[17],"used":[18],"for":[19,171],"finding":[20],"biological":[21],"categories":[22],"enriched":[23],"in":[24,52],"gene":[25,29],"lists,":[26],"conversions":[27],"between":[28],"identifiers":[30],"and":[31,62,73,103,112,140,147,173,187],"mappings":[32],"to":[33,41,95,137],"their":[34,75],"orthologs.":[35],"mission":[37],"provide":[42],"a":[43,53,69,90,96],"reliable":[44],"service":[45],"based":[46],"on":[47,66],"up-to-date":[48],"high":[49],"quality":[50],"convenient":[54],"manner":[55],"across":[56],"many":[57],"evidence":[58],"types,":[59],"identifier":[60],"spaces":[61],"organisms.":[63],"relies":[65],"Ensembl":[67],"as":[68,120],"primary":[70],"source":[72],"follows":[74],"quarterly":[76],"release":[77],"cycle":[78],"while":[79],"updating":[80],"the":[81,129,135,184],"other":[82],"sources":[84],"simultaneously.":[85],"current":[87,130],"update":[88,131,177],"provides":[89],"better":[91],"user":[92,151],"experience":[93],"due":[94],"modern":[97],"responsive":[98],"web":[99,114],"interface,":[100],"standardised":[101],"API":[102],"libraries.":[104],"results":[106],"are":[107,169],"delivered":[108],"through":[109],"an":[110,179],"interactive":[111],"configurable":[113],"design.":[115],"Results":[116],"can":[117],"be":[118],"downloaded":[119],"publication":[121],"ready":[122],"visualisations":[123],"or":[124],"delimited":[125],"text":[126],"files.":[127],"In":[128],"we":[132],"have":[133],"extended":[134],"support":[136],"467":[138],"species":[139],"strains,":[141],"including":[142],"vertebrates,":[143],"plants,":[144],"fungi,":[145],"insects":[146],"parasites.":[148],"By":[149],"supporting":[150],"uploaded":[152],"custom":[153],"GMT":[154],"files,":[155],"now":[158],"capable":[159],"analysing":[161],"any":[164],"organism.":[165],"All":[166],"past":[167],"releases":[168],"maintained":[170],"reproducibility":[172],"transparency.":[174],"2019":[176],"introduces":[178],"extensive":[180],"technical":[181],"rewrite":[182],"making":[183],"services":[185],"faster":[186],"more":[188],"flexible.":[189],"freely":[192],"available":[193],"at":[194],"https://biit.cs.ut.ee/gprofiler.":[195]},"counts_by_year":[{"year":2026,"cited_by_count":243},{"year":2025,"cited_by_count":566},{"year":2024,"cited_by_count":1100},{"year":2023,"cited_by_count":1150},{"year":2022,"cited_by_count":979},{"year":2021,"cited_by_count":900},{"year":2020,"cited_by_count":486},{"year":2019,"cited_by_count":62},{"year":2018,"cited_by_count":1}],"updated_date":"2026-07-21T08:15:58.654021","created_date":"2025-10-10T00:00:00"}
