{"id":"https://openalex.org/W2898481730","doi":"https://doi.org/10.1093/nar/gky981","title":"liqDB: a small-RNAseq knowledge discovery database for liquid biopsy studies","display_name":"liqDB: a small-RNAseq knowledge discovery database for liquid biopsy studies","publication_year":2018,"publication_date":"2018-10-18","ids":{"openalex":"https://openalex.org/W2898481730","doi":"https://doi.org/10.1093/nar/gky981","mag":"2898481730","pmid":"https://pubmed.ncbi.nlm.nih.gov/30357370"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gky981","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gky981","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/nar/gky981","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5016784763","display_name":"Ernesto Aparicio\u2010Puerta","orcid":"https://orcid.org/0000-0002-3470-1425"},"institutions":[{"id":"https://openalex.org/I4210115082","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red","ror":"https://ror.org/02g87qh62","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210115082","https://openalex.org/I4387152914"]},{"id":"https://openalex.org/I173304897","display_name":"Universidad de Granada","ror":"https://ror.org/04njjy449","country_code":"ES","type":"education","lineage":["https://openalex.org/I173304897"]},{"id":"https://openalex.org/I4210113665","display_name":"Instituto de Investigaci\u00f3n Biosanitaria de Granada","ror":"https://ror.org/026yy9j15","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210113665"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Ernesto Aparicio-Puerta","raw_affiliation_strings":["Biohealth Research Institute in Granada (ibs.GRANADA), University Hospitals of Granada-University of Granada, Spain; Conocimiento s/n, 18100 Granada, Spain","Department of Human Anatomy and Embryology, Institute of Biopathology and Regenerative Medicine, Excellence Research Unit \u201cModeling Nature\u201d (MNat), University of Granada, Granada, Spain","Dpto. de Gen\u00e9tica, Facultad de Ciencias, Universidad de Granada, Campus de Fuentenueva s/n, 18071 Granada, Spain","Lab. de Bioinform\u00e1tica, Centro de Investigaci\u00f3n Biom\u00e9dica, PTS, Avda. del Conocimiento","Biohealth Research Institute in Granada (ibs.GRANADA), University Hospitals of Granada-University of Granada, Spain","Department of Human Anatomy and Embryology, Institute of Biopathology and Regenerative Medicine, Excellence Research Unit \"Modeling Nature\" (MNat), University of Granada, Granada, Spain"],"affiliations":[{"raw_affiliation_string":"Biohealth Research Institute in Granada (ibs.GRANADA), University Hospitals of Granada-University of Granada, Spain; Conocimiento s/n, 18100 Granada, Spain","institution_ids":["https://openalex.org/I173304897","https://openalex.org/I4210113665"]},{"raw_affiliation_string":"Department of Human Anatomy and Embryology, Institute of Biopathology and Regenerative Medicine, Excellence Research Unit \u201cModeling Nature\u201d (MNat), University of Granada, Granada, Spain","institution_ids":["https://openalex.org/I173304897"]},{"raw_affiliation_string":"Dpto. de Gen\u00e9tica, Facultad de Ciencias, Universidad de Granada, Campus de Fuentenueva s/n, 18071 Granada, Spain","institution_ids":["https://openalex.org/I173304897"]},{"raw_affiliation_string":"Lab. de Bioinform\u00e1tica, Centro de Investigaci\u00f3n Biom\u00e9dica, PTS, Avda. del Conocimiento","institution_ids":["https://openalex.org/I4210115082"]},{"raw_affiliation_string":"Biohealth Research Institute in Granada (ibs.GRANADA), University Hospitals of Granada-University of Granada, Spain","institution_ids":["https://openalex.org/I173304897","https://openalex.org/I4210113665"]},{"raw_affiliation_string":"Department of Human Anatomy and Embryology, Institute of Biopathology and Regenerative Medicine, Excellence Research Unit \"Modeling Nature\" (MNat), University of Granada, Granada, Spain","institution_ids":["https://openalex.org/I173304897"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024800985","display_name":"David J\u00e1spez","orcid":"https://orcid.org/0000-0001-7923-0068"},"institutions":[{"id":"https://openalex.org/I173304897","display_name":"Universidad de Granada","ror":"https://ror.org/04njjy449","country_code":"ES","type":"education","lineage":["https://openalex.org/I173304897"]},{"id":"https://openalex.org/I4210115082","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red","ror":"https://ror.org/02g87qh62","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210115082","https://openalex.org/I4387152914"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"David J\u00e1spez","raw_affiliation_strings":["Dpto. de Gen\u00e9tica, Facultad de Ciencias, Universidad de Granada, Campus de Fuentenueva s/n, 18071 Granada, Spain","Lab. de Bioinform\u00e1tica, Centro de Investigaci\u00f3n Biom\u00e9dica, PTS, Avda. del Conocimiento"],"affiliations":[{"raw_affiliation_string":"Dpto. de Gen\u00e9tica, Facultad de Ciencias, Universidad de Granada, Campus de Fuentenueva s/n, 18071 Granada, Spain","institution_ids":["https://openalex.org/I173304897"]},{"raw_affiliation_string":"Lab. de Bioinform\u00e1tica, Centro de Investigaci\u00f3n Biom\u00e9dica, PTS, Avda. del Conocimiento","institution_ids":["https://openalex.org/I4210115082"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069644962","display_name":"Ricardo Lebr\u00f3n","orcid":"https://orcid.org/0000-0002-5120-843X"},"institutions":[{"id":"https://openalex.org/I4210115082","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red","ror":"https://ror.org/02g87qh62","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210115082","https://openalex.org/I4387152914"]},{"id":"https://openalex.org/I173304897","display_name":"Universidad de Granada","ror":"https://ror.org/04njjy449","country_code":"ES","type":"education","lineage":["https://openalex.org/I173304897"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Ricardo Lebr\u00f3n","raw_affiliation_strings":["Dpto. de Gen\u00e9tica, Facultad de Ciencias, Universidad de Granada, Campus de Fuentenueva s/n, 18071 Granada, Spain","Lab. de Bioinform\u00e1tica, Centro de Investigaci\u00f3n Biom\u00e9dica, PTS, Avda. del Conocimiento"],"affiliations":[{"raw_affiliation_string":"Dpto. de Gen\u00e9tica, Facultad de Ciencias, Universidad de Granada, Campus de Fuentenueva s/n, 18071 Granada, Spain","institution_ids":["https://openalex.org/I173304897"]},{"raw_affiliation_string":"Lab. de Bioinform\u00e1tica, Centro de Investigaci\u00f3n Biom\u00e9dica, PTS, Avda. del Conocimiento","institution_ids":["https://openalex.org/I4210115082"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009344649","display_name":"Danijela Koppers\u2010Lalic","orcid":"https://orcid.org/0000-0002-1050-7521"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Danijela Koppers-Lalic","raw_affiliation_strings":["Department of Neurosurgery, VUmc Amsterdam, Amsterdam, Netherlands"],"affiliations":[{"raw_affiliation_string":"Department of Neurosurgery, VUmc Amsterdam, Amsterdam, Netherlands","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073290586","display_name":"Juan Antonio Marchal","orcid":"https://orcid.org/0000-0002-4996-8261"},"institutions":[{"id":"https://openalex.org/I173304897","display_name":"Universidad de Granada","ror":"https://ror.org/04njjy449","country_code":"ES","type":"education","lineage":["https://openalex.org/I173304897"]},{"id":"https://openalex.org/I4210113665","display_name":"Instituto de Investigaci\u00f3n Biosanitaria de Granada","ror":"https://ror.org/026yy9j15","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210113665"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Juan\u00a0A Marchal","raw_affiliation_strings":["Biohealth Research Institute in Granada (ibs.GRANADA), University Hospitals of Granada-University of Granada, Spain; Conocimiento s/n, 18100 Granada, Spain","Department of Human Anatomy and Embryology, Institute of Biopathology and Regenerative Medicine, Excellence Research Unit \u201cModeling Nature\u201d (MNat), University of Granada, Granada, Spain","Department of Human Anatomy and Embryology, Institute of Biopathology and Regenerative Medicine, Excellence Research Unit \"Modeling Nature\" (MNat), University of Granada, Granada, Spain","Conocimiento s/n, 18100 Granada, Spain"],"affiliations":[{"raw_affiliation_string":"Biohealth Research Institute in Granada (ibs.GRANADA), University Hospitals of Granada-University of Granada, Spain; Conocimiento s/n, 18100 Granada, Spain","institution_ids":["https://openalex.org/I173304897","https://openalex.org/I4210113665"]},{"raw_affiliation_string":"Department of Human Anatomy and Embryology, Institute of Biopathology and Regenerative Medicine, Excellence Research Unit \u201cModeling Nature\u201d (MNat), University of Granada, Granada, Spain","institution_ids":["https://openalex.org/I173304897"]},{"raw_affiliation_string":"Department of Human Anatomy and Embryology, Institute of Biopathology and Regenerative Medicine, Excellence Research Unit \"Modeling Nature\" (MNat), University of Granada, Granada, Spain","institution_ids":["https://openalex.org/I173304897"]},{"raw_affiliation_string":"Conocimiento s/n, 18100 Granada, Spain","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5084745527","display_name":"Michael Hackenberg","orcid":"https://orcid.org/0000-0003-2248-3114"},"institutions":[{"id":"https://openalex.org/I4210115082","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red","ror":"https://ror.org/02g87qh62","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210115082","https://openalex.org/I4387152914"]},{"id":"https://openalex.org/I4210113665","display_name":"Instituto de Investigaci\u00f3n Biosanitaria de Granada","ror":"https://ror.org/026yy9j15","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210113665"]},{"id":"https://openalex.org/I173304897","display_name":"Universidad de Granada","ror":"https://ror.org/04njjy449","country_code":"ES","type":"education","lineage":["https://openalex.org/I173304897"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Michael Hackenberg","raw_affiliation_strings":["Biohealth Research Institute in Granada (ibs.GRANADA), University Hospitals of Granada-University of Granada, Spain; Conocimiento s/n, 18100 Granada, Spain","Dpto. de Gen\u00e9tica, Facultad de Ciencias, Universidad de Granada, Campus de Fuentenueva s/n, 18071 Granada, Spain","Lab. de Bioinform\u00e1tica, Centro de Investigaci\u00f3n Biom\u00e9dica, PTS, Avda. del Conocimiento","Biohealth Research Institute in Granada (ibs.GRANADA), University Hospitals of Granada-University of Granada, Spain"],"affiliations":[{"raw_affiliation_string":"Biohealth Research Institute in Granada (ibs.GRANADA), University Hospitals of Granada-University of Granada, Spain; Conocimiento s/n, 18100 Granada, Spain","institution_ids":["https://openalex.org/I173304897","https://openalex.org/I4210113665"]},{"raw_affiliation_string":"Dpto. de Gen\u00e9tica, Facultad de Ciencias, Universidad de Granada, Campus de Fuentenueva s/n, 18071 Granada, Spain","institution_ids":["https://openalex.org/I173304897"]},{"raw_affiliation_string":"Lab. de Bioinform\u00e1tica, Centro de Investigaci\u00f3n Biom\u00e9dica, PTS, Avda. del Conocimiento","institution_ids":["https://openalex.org/I4210115082"]},{"raw_affiliation_string":"Biohealth Research Institute in Granada (ibs.GRANADA), University Hospitals of Granada-University of Granada, Spain","institution_ids":["https://openalex.org/I173304897","https://openalex.org/I4210113665"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5084745527"],"corresponding_institution_ids":["https://openalex.org/I173304897","https://openalex.org/I4210113665","https://openalex.org/I4210115082"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":0.5568,"has_fulltext":true,"cited_by_count":17,"citation_normalized_percentile":{"value":0.61330574,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"47","issue":"D1","first_page":"D113","last_page":"D120"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6493536829948425},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5823338031768799},{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.578084409236908},{"id":"https://openalex.org/keywords/rna-extraction","display_name":"RNA extraction","score":0.5339632630348206},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.5093932747840881},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3947305977344513},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3660212755203247},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3358154594898224},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.33565574884414673},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.25484639406204224},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.13183853030204773}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6493536829948425},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5823338031768799},{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.578084409236908},{"id":"https://openalex.org/C112190416","wikidata":"https://www.wikidata.org/wiki/Q2124450","display_name":"RNA extraction","level":4,"score":0.5339632630348206},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.5093932747840881},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3947305977344513},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3660212755203247},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3358154594898224},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.33565574884414673},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.25484639406204224},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.13183853030204773}],"mesh":[{"descriptor_ui":"D000073888","descriptor_name":"Cell-Free Nucleic Acids","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000073888","descriptor_name":"Cell-Free Nucleic Acids","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000073888","descriptor_name":"Cell-Free Nucleic Acids","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000073890","descriptor_name":"Liquid Biopsy","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000073890","descriptor_name":"Liquid Biopsy","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000073890","descriptor_name":"Liquid Biopsy","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012985","descriptor_name":"Software Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012985","descriptor_name":"Software Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012985","descriptor_name":"Software Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058727","descriptor_name":"RNA, Small Untranslated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058727","descriptor_name":"RNA, Small Untranslated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058727","descriptor_name":"RNA, Small Untranslated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":8,"locations":[{"id":"doi:10.1093/nar/gky981","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gky981","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:30357370","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30357370","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pure.amsterdamumc.nl:openaire_cris_publications/599a549e-76c1-438e-926c-4a9efa1032a1","is_oa":true,"landing_page_url":"https://pure.amsterdamumc.nl/en/publications/599a549e-76c1-438e-926c-4a9efa1032a1","pdf_url":"https://pure.amsterdamumc.nl/files/156941697/Iiqdb.pdf","source":{"id":"https://openalex.org/S7407055222","display_name":"Pure Amsterdam UMC","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Aparicio-Puerta, E, J\u00e1spez, D, Lebr\u00f3n, R, Koppers-Lalic, D, Marchal, J A & Hackenberg, M 2019, 'IiqDB : A small-RNAseq knowledge discovery database for liquid biopsy studies', Nucleic acids research, vol. 47, no. D1, pp. D113-D120. https://doi.org/10.1093/nar/gky981","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:www.repositoriosalud.es:10668/13128","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6323997/pdf","pdf_url":null,"source":{"id":"https://openalex.org/S4377196114","display_name":"RISalud Institutional Health Repository of Andaluc\u00eda","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"research article"},{"id":"pmh:oai:digibug.ugr.es:10481/59005","is_oa":true,"landing_page_url":"http://hdl.handle.net/10481/59005","pdf_url":null,"source":{"id":"https://openalex.org/S4306400567","display_name":"Institutional Repository of the University of Granada (University of Granada)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I173304897","host_organization_name":"Universidad de Granada","host_organization_lineage":["https://openalex.org/I173304897"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:europepmc.org:5301986","is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC6323997","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:6323997","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6323997","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"},{"id":"pmh:vumc:oai:pure.atira.dk:publications/65dd7ba9-476f-4f94-8529-143056bf50be","is_oa":true,"landing_page_url":"https://research.vumc.nl/en/publications/65dd7ba9-476f-4f94-8529-143056bf50be","pdf_url":null,"source":{"id":"https://openalex.org/S4306401843","display_name":"Data Archiving and Networked Services (DANS)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1322597698","host_organization_name":"Royal Netherlands Academy of Arts and Sciences","host_organization_lineage":["https://openalex.org/I1322597698"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Research, 47(D1), D113 - D120. Oxford University Press","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/nar/gky981","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gky981","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G5304387048","display_name":null,"funder_award_id":"765492","funder_id":"https://openalex.org/F4320335254","funder_display_name":"Horizon 2020"},{"id":"https://openalex.org/G7779868532","display_name":null,"funder_award_id":"FEDER","funder_id":"https://openalex.org/F4320334923","funder_display_name":"Instituto de Salud Carlos III"},{"id":"https://openalex.org/G8697547690","display_name":null,"funder_award_id":"PIE16/00045","funder_id":"https://openalex.org/F4320334923","funder_display_name":"Instituto de Salud Carlos III"}],"funders":[{"id":"https://openalex.org/F4320323834","display_name":"Universidad de Granada","ror":"https://ror.org/04njjy449"},{"id":"https://openalex.org/F4320334923","display_name":"Instituto de Salud Carlos III","ror":"https://ror.org/00ca2c886"},{"id":"https://openalex.org/F4320335254","display_name":"Horizon 2020","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":58,"referenced_works":["https://openalex.org/W1521676890","https://openalex.org/W1648301895","https://openalex.org/W1954530082","https://openalex.org/W1994809451","https://openalex.org/W2024206172","https://openalex.org/W2077327925","https://openalex.org/W2078424563","https://openalex.org/W2082448279","https://openalex.org/W2082726774","https://openalex.org/W2096525273","https://openalex.org/W2105726520","https://openalex.org/W2107903949","https://openalex.org/W2112810020","https://openalex.org/W2114104545","https://openalex.org/W2149966907","https://openalex.org/W2152239989","https://openalex.org/W2223836536","https://openalex.org/W2251552368","https://openalex.org/W2341933147","https://openalex.org/W2588257859","https://openalex.org/W2588839509","https://openalex.org/W2596417560","https://openalex.org/W2744525160","https://openalex.org/W2758610627","https://openalex.org/W2763620027","https://openalex.org/W2766946295","https://openalex.org/W2790644458","https://openalex.org/W2883688299","https://openalex.org/W4230784961","https://openalex.org/W4234797890","https://openalex.org/W4250359879","https://openalex.org/W6631205520","https://openalex.org/W6637014446","https://openalex.org/W6640623760","https://openalex.org/W6649268292","https://openalex.org/W6656502690","https://openalex.org/W6669614655","https://openalex.org/W6670040653","https://openalex.org/W6671128572","https://openalex.org/W6671266259","https://openalex.org/W6675782277","https://openalex.org/W6676195842","https://openalex.org/W6676547010","https://openalex.org/W6682331158","https://openalex.org/W6682486214","https://openalex.org/W6689223521","https://openalex.org/W6691377324","https://openalex.org/W6704112006","https://openalex.org/W6733731350","https://openalex.org/W6734072242","https://openalex.org/W6742883286","https://openalex.org/W6744399719","https://openalex.org/W6745192515","https://openalex.org/W6745984877","https://openalex.org/W6748765656","https://openalex.org/W6752994578","https://openalex.org/W6832027530","https://openalex.org/W7005765037"],"related_works":["https://openalex.org/W2802891156","https://openalex.org/W3007932897","https://openalex.org/W4232242386","https://openalex.org/W3196168296","https://openalex.org/W3039857220","https://openalex.org/W2147993839","https://openalex.org/W3173186018","https://openalex.org/W1927445598","https://openalex.org/W2384038647","https://openalex.org/W2806739216"],"abstract_inverted_index":{"MiRNAs":[0],"are":[1,8,15,61],"important":[2],"regulators":[3],"of":[4,43,51,108,149,174],"gene":[5],"expression":[6,114,133,136],"and":[7,46,67,99,103,124,144,151,183],"frequently":[9],"deregulated":[10],"under":[11],"pathologic":[12],"conditions.":[13],"They":[14],"highly":[16],"stable":[17],"in":[18,162],"bodily":[19],"fluids":[20],"which":[21],"makes":[22],"them":[23],"feasible":[24],"candidates":[25],"to":[26,91,100],"become":[27],"minimally":[28],"invasive":[29],"biomarkers.":[30],"In":[31],"fact,":[32],"several":[33],"studies":[34,53],"already":[35],"proposed":[36],"circulating":[37],"miRNA-based":[38],"biomarkers":[39],"for":[40,78,179],"different":[41,64,127],"types":[42],"neoplastic,":[44],"cardiovascular":[45],"degenerative":[47],"diseases.":[48],"However,":[49],"many":[50],"these":[52],"rely":[54],"on":[55,63],"small":[56,81,94],"RNA":[57,65,82,95],"sequencing":[58,83],"experiments":[59,175],"that":[60,85,155],"based":[62],"extraction":[66],"processing":[68],"protocols,":[69],"rendering":[70],"results":[71],"incomparable.":[72],"We":[73,153],"generated":[74],"liqDB,":[75],"a":[76,109,159,169],"database":[77],"liquid":[79,96,163],"biopsy":[80,97,164],"profiles":[84,115],"provides":[86,168],"users":[87],"with":[88,177],"meaningful":[89],"information":[90],"guide":[92],"their":[93],"research":[98,165],"overcome":[101],"technical":[102],"conceptual":[104],"problems.":[105],"By":[106],"means":[107,148],"user-friendly":[110],"web":[111],"interface,":[112],"miRNA":[113],"from":[116],"1607":[117],"manually":[118],"annotated":[119,171],"samples":[120],"can":[121],"be":[122,158],"queried":[123],"explored":[125],"at":[126,189],"levels.":[128],"Result":[129],"pages":[130],"include":[131],"downloadable":[132],"matrices,":[134],"differential":[135],"analysis,":[137,181],"most":[138],"stably":[139],"expressed":[140],"miRNAs,":[141],"cluster":[142],"analysis":[143],"relevant":[145],"visualizations":[146],"by":[147],"boxplots":[150],"heatmaps.":[152],"anticipate":[154],"liqDB":[156],"will":[157],"useful":[160],"tool":[161],"as":[166],"it":[167],"consistently":[170],"large":[172],"compilation":[173],"together":[176],"tools":[178],"reproducible":[180],"comparison":[182],"hypothesis":[184],"generation.":[185],"LiqDB":[186],"is":[187],"available":[188],"http://bioinfo5.ugr.es/liqdb.":[190]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":1}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
