{"id":"https://openalex.org/W2898280147","doi":"https://doi.org/10.1093/nar/gky956","title":"piRTarBase: a database of piRNA targeting sites and their roles in gene regulation","display_name":"piRTarBase: a database of piRNA targeting sites and their roles in gene regulation","publication_year":2018,"publication_date":"2018-10-04","ids":{"openalex":"https://openalex.org/W2898280147","doi":"https://doi.org/10.1093/nar/gky956","mag":"2898280147","pmid":"https://pubmed.ncbi.nlm.nih.gov/30357353"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gky956","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gky956","pdf_url":"https://academic.oup.com/nar/article-pdf/47/D1/D181/27436369/gky956.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/47/D1/D181/27436369/gky956.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100635721","display_name":"Wei-Sheng Wu","orcid":"https://orcid.org/0000-0002-9919-9579"},"institutions":[{"id":"https://openalex.org/I91807558","display_name":"National Cheng Kung University","ror":"https://ror.org/01b8kcc49","country_code":"TW","type":"education","lineage":["https://openalex.org/I91807558"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Wei-Sheng Wu","raw_affiliation_strings":["Department of Electrical Engineering, National Cheng Kung University, Tainan, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical Engineering, National Cheng Kung University, Tainan, Taiwan","institution_ids":["https://openalex.org/I91807558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028283845","display_name":"Jordan Brown","orcid":"https://orcid.org/0000-0001-9880-4784"},"institutions":[{"id":"https://openalex.org/I40347166","display_name":"University of Chicago","ror":"https://ror.org/024mw5h28","country_code":"US","type":"education","lineage":["https://openalex.org/I40347166"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jordan S Brown","raw_affiliation_strings":["Department of Molecular Genetics and Cell Biology, University of Chicago, Chicago, IL 60637, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Molecular Genetics and Cell Biology, University of Chicago, Chicago, IL 60637, USA","institution_ids":["https://openalex.org/I40347166"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110507695","display_name":"Tsung-Te Chen","orcid":null},"institutions":[{"id":"https://openalex.org/I91807558","display_name":"National Cheng Kung University","ror":"https://ror.org/01b8kcc49","country_code":"TW","type":"education","lineage":["https://openalex.org/I91807558"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Tsung-Te Chen","raw_affiliation_strings":["Department of Electrical Engineering, National Cheng Kung University, Tainan, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical Engineering, National Cheng Kung University, Tainan, Taiwan","institution_ids":["https://openalex.org/I91807558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057465239","display_name":"Yu-Han Chu","orcid":null},"institutions":[{"id":"https://openalex.org/I91807558","display_name":"National Cheng Kung University","ror":"https://ror.org/01b8kcc49","country_code":"TW","type":"education","lineage":["https://openalex.org/I91807558"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Yu-Han Chu","raw_affiliation_strings":["Department of Electrical Engineering, National Cheng Kung University, Tainan, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical Engineering, National Cheng Kung University, Tainan, Taiwan","institution_ids":["https://openalex.org/I91807558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107297293","display_name":"Wei-Che Huang","orcid":null},"institutions":[{"id":"https://openalex.org/I91807558","display_name":"National Cheng Kung University","ror":"https://ror.org/01b8kcc49","country_code":"TW","type":"education","lineage":["https://openalex.org/I91807558"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Wei-Che Huang","raw_affiliation_strings":["Department of Electrical Engineering, National Cheng Kung University, Tainan, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical Engineering, National Cheng Kung University, Tainan, Taiwan","institution_ids":["https://openalex.org/I91807558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073963268","display_name":"Shikui Tu","orcid":"https://orcid.org/0000-0001-6270-0449"},"institutions":[{"id":"https://openalex.org/I183067930","display_name":"Shanghai Jiao Tong University","ror":"https://ror.org/0220qvk04","country_code":"CN","type":"education","lineage":["https://openalex.org/I183067930"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shikui Tu","raw_affiliation_strings":["Department of Computer Science and Engineering, Shanghai Jiao Tong University, Shanghai, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Shanghai Jiao Tong University, Shanghai, China","institution_ids":["https://openalex.org/I183067930"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5022829934","display_name":"Heng-Chi Lee","orcid":"https://orcid.org/0000-0001-8154-906X"},"institutions":[{"id":"https://openalex.org/I40347166","display_name":"University of Chicago","ror":"https://ror.org/024mw5h28","country_code":"US","type":"education","lineage":["https://openalex.org/I40347166"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Heng-Chi Lee","raw_affiliation_strings":["Department of Molecular Genetics and Cell Biology, University of Chicago, Chicago, IL 60637, USA"],"raw_orcid":"https://orcid.org/0000-0001-8154-906X","affiliations":[{"raw_affiliation_string":"Department of Molecular Genetics and Cell Biology, University of Chicago, Chicago, IL 60637, USA","institution_ids":["https://openalex.org/I40347166"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5022829934"],"corresponding_institution_ids":["https://openalex.org/I40347166"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":2.7181,"has_fulltext":false,"cited_by_count":65,"citation_normalized_percentile":{"value":0.91600002,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"47","issue":"D1","first_page":"D181","last_page":"D187"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10878","display_name":"CRISPR and Genetic Engineering","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10878","display_name":"CRISPR and Genetic Engineering","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10676","display_name":"Genetics, Aging, and Longevity in Model Organisms","score":0.9876999855041504,"subfield":{"id":"https://openalex.org/subfields/1302","display_name":"Aging"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/piwi-interacting-rna","display_name":"Piwi-interacting RNA","score":0.9862139225006104},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8851691484451294},{"id":"https://openalex.org/keywords/transposable-element","display_name":"Transposable element","score":0.7551172971725464},{"id":"https://openalex.org/keywords/caenorhabditis-elegans","display_name":"Caenorhabditis elegans","score":0.6208277344703674},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6137812733650208},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.6026317477226257},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5643702149391174},{"id":"https://openalex.org/keywords/gene-silencing","display_name":"Gene silencing","score":0.5541474223136902},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5059160590171814},{"id":"https://openalex.org/keywords/rasirna","display_name":"RasiRNA","score":0.466891884803772},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.44586339592933655},{"id":"https://openalex.org/keywords/small-rna","display_name":"Small RNA","score":0.44555097818374634},{"id":"https://openalex.org/keywords/rna-interference","display_name":"RNA interference","score":0.42221590876579285}],"concepts":[{"id":"https://openalex.org/C147724379","wikidata":"https://www.wikidata.org/wiki/Q2367421","display_name":"Piwi-interacting RNA","level":5,"score":0.9862139225006104},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8851691484451294},{"id":"https://openalex.org/C4918238","wikidata":"https://www.wikidata.org/wiki/Q121438","display_name":"Transposable element","level":4,"score":0.7551172971725464},{"id":"https://openalex.org/C2778944004","wikidata":"https://www.wikidata.org/wiki/Q91703","display_name":"Caenorhabditis elegans","level":3,"score":0.6208277344703674},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6137812733650208},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.6026317477226257},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5643702149391174},{"id":"https://openalex.org/C119056186","wikidata":"https://www.wikidata.org/wiki/Q1431332","display_name":"Gene silencing","level":3,"score":0.5541474223136902},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5059160590171814},{"id":"https://openalex.org/C188172738","wikidata":"https://www.wikidata.org/wiki/Q2367421","display_name":"RasiRNA","level":5,"score":0.466891884803772},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.44586339592933655},{"id":"https://openalex.org/C2779341050","wikidata":"https://www.wikidata.org/wiki/Q24287527","display_name":"Small RNA","level":4,"score":0.44555097818374634},{"id":"https://openalex.org/C166703698","wikidata":"https://www.wikidata.org/wiki/Q201993","display_name":"RNA interference","level":4,"score":0.42221590876579285}],"mesh":[{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020868","descriptor_name":"Gene Silencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020868","descriptor_name":"Gene Silencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020868","descriptor_name":"Gene Silencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D034622","descriptor_name":"RNA Interference","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D034622","descriptor_name":"RNA Interference","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D034622","descriptor_name":"RNA Interference","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D034741","descriptor_name":"RNA, Small Interfering","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D034741","descriptor_name":"RNA, Small Interfering","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D034741","descriptor_name":"RNA, Small Interfering","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gky956","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gky956","pdf_url":"https://academic.oup.com/nar/article-pdf/47/D1/D181/27436369/gky956.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:30357353","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30357353","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:europepmc.org:5301924","is_oa":false,"landing_page_url":"http://europepmc.org/pmc/articles/PMC6323935","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:6323935","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6323935","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gky956","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gky956","pdf_url":"https://academic.oup.com/nar/article-pdf/47/D1/D181/27436369/gky956.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1074375644","display_name":null,"funder_award_id":"T32 GM007197","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G4688972072","display_name":"\u57fa\u4e8e\u679c\u8747piRNA\u5927\u6570\u636e\u6316\u6398\u7684\u57fa\u56e0\u8c03\u63a7\u673a\u5236\u7814\u7a76","funder_award_id":"61802256","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7629191703","display_name":null,"funder_award_id":"R00 GM108866","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":31,"referenced_works":["https://openalex.org/W1977733607","https://openalex.org/W1987908533","https://openalex.org/W2004857443","https://openalex.org/W2013163897","https://openalex.org/W2015423672","https://openalex.org/W2035930185","https://openalex.org/W2039684583","https://openalex.org/W2046318418","https://openalex.org/W2048218599","https://openalex.org/W2050385516","https://openalex.org/W2085421027","https://openalex.org/W2103012554","https://openalex.org/W2112991137","https://openalex.org/W2117165052","https://openalex.org/W2134629862","https://openalex.org/W2138910750","https://openalex.org/W2143835326","https://openalex.org/W2146339022","https://openalex.org/W2148105495","https://openalex.org/W2150395782","https://openalex.org/W2162674813","https://openalex.org/W2296037828","https://openalex.org/W2342051973","https://openalex.org/W2469085018","https://openalex.org/W2593551397","https://openalex.org/W2744417500","https://openalex.org/W2785454496","https://openalex.org/W2787112631","https://openalex.org/W2787719063","https://openalex.org/W2788865254","https://openalex.org/W2799603881"],"related_works":["https://openalex.org/W2015402753","https://openalex.org/W4226170045","https://openalex.org/W2943992342","https://openalex.org/W1976342457","https://openalex.org/W174240284","https://openalex.org/W4254016008","https://openalex.org/W1511345757","https://openalex.org/W2951155836","https://openalex.org/W2964560715","https://openalex.org/W2109556804"],"abstract_inverted_index":{"PIWI-interacting":[0],"RNAs":[1,9],"(piRNAs)":[2],"are":[3,54,143],"a":[4,59,84,99,103],"class":[5],"of":[6,32,34,52,80,86,105],"small":[7,115],"noncoding":[8],"that":[10,25,132,164],"guard":[11],"animal":[12],"genomes":[13],"against":[14],"mutation":[15],"by":[16,137,174],"silencing":[17,148],"transposons.":[18],"In":[19],"addition,":[20],"recent":[21],"studies":[22],"have":[23],"reported":[24],"piRNAs":[26,36,53],"silence":[27],"various":[28,176],"endogenous":[29],"genes.":[30,93],"Tens":[31],"thousands":[33],"distinct":[35],"made":[37],"in":[38,72],"animals":[39],"do":[40],"not":[41],"pair":[42],"well":[43],"to":[44,62,146,168],"transposons":[45],"and":[46,50,66,82,101,114,140],"currently":[47],"the":[48,91,95,133],"functions":[49],"targets":[51,152],"largely":[55],"unexplored.":[56],"piRTarBase":[57,110,159,178],"provides":[58],"user-friendly":[60],"interface":[61],"access":[63],"both":[64,138],"predicted":[65],"experimentally":[67],"identified":[68],"piRNA":[69,87,100,134,171],"targeting":[70,88,126],"sites":[71,89,135,173],"Caenorhabditis":[73],"elegans.":[74],"The":[75],"user":[76,96],"can":[77,97],"input":[78,92,98],"genes":[79],"interest":[81],"retrieve":[83,102],"list":[85,104],"on":[90,150],"Alternatively,":[94],"its":[106],"mRNA":[107,113],"targets.":[108],"Additionally,":[109],"integrates":[111],"published":[112],"RNA":[116],"sequencing":[117],"data,":[118],"which":[119],"will":[120,165],"help":[121,166],"users":[122,167],"identify":[123,169],"biologically":[124],"relevant":[125],"events.":[127],"Importantly,":[128],"our":[129],"analyses":[130],"suggest":[131],"found":[136],"predictive":[139],"experimental":[141],"approaches":[142],"more":[144],"likely":[145],"exhibit":[147],"effects":[149],"their":[151],"than":[153],"each":[154],"method":[155],"alone.":[156],"Taken":[157],"together,":[158],"offers":[160],"an":[161],"integrative":[162],"platform":[163],"functional":[170],"target":[172],"evaluating":[175],"information.":[177],"is":[179],"freely":[180],"available":[181],"for":[182],"academic":[183],"use":[184],"at":[185],"http://cosbi6.ee.ncku.edu.tw/piRTarBase/.":[186]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":8},{"year":2024,"cited_by_count":9},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":9},{"year":2021,"cited_by_count":15},{"year":2020,"cited_by_count":10},{"year":2019,"cited_by_count":7},{"year":2018,"cited_by_count":1}],"updated_date":"2026-07-15T18:14:33.161393","created_date":"2025-10-10T00:00:00"}