{"id":"https://openalex.org/W2891678790","doi":"https://doi.org/10.1093/nar/gky822","title":"AnimalTFDB 3.0: a comprehensive resource for annotation and prediction of animal transcription factors","display_name":"AnimalTFDB 3.0: a comprehensive resource for annotation and prediction of animal transcription factors","publication_year":2018,"publication_date":"2018-09-03","ids":{"openalex":"https://openalex.org/W2891678790","doi":"https://doi.org/10.1093/nar/gky822","mag":"2891678790","pmid":"https://pubmed.ncbi.nlm.nih.gov/30204897"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gky822","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gky822","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/nar/gky822","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100422517","display_name":"Hui Hu","orcid":"https://orcid.org/0000-0002-9208-1041"},"institutions":[{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hui Hu","raw_affiliation_strings":["Department of Bioinformatics and Systems Biology, Key Laboratory of Molecular Biophysics of the Ministry of Education, Hubei Bioinformatics and Molecular Imaging Key Laboratory, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, Hubei\u00a0430074, PR China","Huazhong University of Science and Technology Ezhou Industrial Technology Research Institute, Ezhou, Hubei 436044, PR China"],"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics and Systems Biology, Key Laboratory of Molecular Biophysics of the Ministry of Education, Hubei Bioinformatics and Molecular Imaging Key Laboratory, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, Hubei\u00a0430074, PR China","institution_ids":["https://openalex.org/I47720641"]},{"raw_affiliation_string":"Huazhong University of Science and Technology Ezhou Industrial Technology Research Institute, Ezhou, Hubei 436044, PR China","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102311894","display_name":"Ya-Ru Miao","orcid":null},"institutions":[{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ya-Ru Miao","raw_affiliation_strings":["Department of Bioinformatics and Systems Biology, Key Laboratory of Molecular Biophysics of the Ministry of Education, Hubei Bioinformatics and Molecular Imaging Key Laboratory, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, Hubei\u00a0430074, PR China","Huazhong University of Science and Technology Ezhou Industrial Technology Research Institute, Ezhou, Hubei 436044, PR China"],"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics and Systems Biology, Key Laboratory of Molecular Biophysics of the Ministry of Education, Hubei Bioinformatics and Molecular Imaging Key Laboratory, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, Hubei\u00a0430074, PR China","institution_ids":["https://openalex.org/I47720641"]},{"raw_affiliation_string":"Huazhong University of Science and Technology Ezhou Industrial Technology Research Institute, Ezhou, Hubei 436044, PR China","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026525272","display_name":"Long-Hao Jia","orcid":null},"institutions":[{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Long-Hao Jia","raw_affiliation_strings":["Department of Bioinformatics and Systems Biology, Key Laboratory of Molecular Biophysics of the Ministry of Education, Hubei Bioinformatics and Molecular Imaging Key Laboratory, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, Hubei\u00a0430074, PR China"],"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics and Systems Biology, Key Laboratory of Molecular Biophysics of the Ministry of Education, Hubei Bioinformatics and Molecular Imaging Key Laboratory, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, Hubei\u00a0430074, PR China","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110576104","display_name":"Qing-Yang Yu","orcid":null},"institutions":[{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qing-Yang Yu","raw_affiliation_strings":["Department of Bioinformatics and Systems Biology, Key Laboratory of Molecular Biophysics of the Ministry of Education, Hubei Bioinformatics and Molecular Imaging Key Laboratory, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, Hubei\u00a0430074, PR China"],"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics and Systems Biology, Key Laboratory of Molecular Biophysics of the Ministry of Education, Hubei Bioinformatics and Molecular Imaging Key Laboratory, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, Hubei\u00a0430074, PR China","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100407278","display_name":"Qiong Zhang","orcid":"https://orcid.org/0000-0001-5001-8434"},"institutions":[{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qiong Zhang","raw_affiliation_strings":["Department of Bioinformatics and Systems Biology, Key Laboratory of Molecular Biophysics of the Ministry of Education, Hubei Bioinformatics and Molecular Imaging Key Laboratory, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, Hubei\u00a0430074, PR China"],"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics and Systems Biology, Key Laboratory of Molecular Biophysics of the Ministry of Education, Hubei Bioinformatics and Molecular Imaging Key Laboratory, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, Hubei\u00a0430074, PR China","institution_ids":["https://openalex.org/I47720641"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5009558607","display_name":"An\u2010Yuan Guo","orcid":"https://orcid.org/0000-0002-5099-7465"},"institutions":[{"id":"https://openalex.org/I47720641","display_name":"Huazhong University of Science and Technology","ror":"https://ror.org/00p991c53","country_code":"CN","type":"education","lineage":["https://openalex.org/I47720641"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"An-Yuan Guo","raw_affiliation_strings":["Department of Bioinformatics and Systems Biology, Key Laboratory of Molecular Biophysics of the Ministry of Education, Hubei Bioinformatics and Molecular Imaging Key Laboratory, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, Hubei\u00a0430074, PR China","Huazhong University of Science and Technology Ezhou Industrial Technology Research Institute, Ezhou, Hubei 436044, PR China"],"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics and Systems Biology, Key Laboratory of Molecular Biophysics of the Ministry of Education, Hubei Bioinformatics and Molecular Imaging Key Laboratory, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, Hubei\u00a0430074, PR China","institution_ids":["https://openalex.org/I47720641"]},{"raw_affiliation_string":"Huazhong University of Science and Technology Ezhou Industrial Technology Research Institute, Ezhou, Hubei 436044, PR China","institution_ids":["https://openalex.org/I47720641"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5009558607"],"corresponding_institution_ids":["https://openalex.org/I47720641"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":27.0878,"has_fulltext":false,"cited_by_count":936,"citation_normalized_percentile":{"value":0.99800752,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":100},"biblio":{"volume":"47","issue":"D1","first_page":"D33","last_page":"D38"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.763236403465271},{"id":"https://openalex.org/keywords/transcription-factor","display_name":"Transcription factor","score":0.7628073692321777},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6408373713493347},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.592251181602478},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.47484710812568665},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4437767267227173},{"id":"https://openalex.org/keywords/dna-binding-site","display_name":"DNA binding site","score":0.43453747034072876},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.4141022264957428},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.35630691051483154},{"id":"https://openalex.org/keywords/promoter","display_name":"Promoter","score":0.24585461616516113},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.14159327745437622}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.763236403465271},{"id":"https://openalex.org/C86339819","wikidata":"https://www.wikidata.org/wiki/Q407384","display_name":"Transcription factor","level":3,"score":0.7628073692321777},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6408373713493347},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.592251181602478},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.47484710812568665},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4437767267227173},{"id":"https://openalex.org/C3662595","wikidata":"https://www.wikidata.org/wiki/Q5205743","display_name":"DNA binding site","level":5,"score":0.43453747034072876},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.4141022264957428},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.35630691051483154},{"id":"https://openalex.org/C101762097","wikidata":"https://www.wikidata.org/wiki/Q224093","display_name":"Promoter","level":4,"score":0.24585461616516113},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.14159327745437622}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gky822","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gky822","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:30204897","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30204897","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:europepmc.org:5301967","is_oa":false,"landing_page_url":"http://europepmc.org/pmc/articles/PMC6323978","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:6323978","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6323978","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gky822","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gky822","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1158003992","display_name":null,"funder_award_id":"2017YFA0700403","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G2071878295","display_name":null,"funder_award_id":"31822030","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G29095534","display_name":null,"funder_award_id":"31801154","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G632062907","display_name":null,"funder_award_id":"31771458","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8535714184","display_name":null,"funder_award_id":"31801113","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320313288","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52"},{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":43,"referenced_works":["https://openalex.org/W143872045","https://openalex.org/W1709815505","https://openalex.org/W1975542294","https://openalex.org/W1976502930","https://openalex.org/W2009539999","https://openalex.org/W2033169664","https://openalex.org/W2034907050","https://openalex.org/W2038584294","https://openalex.org/W2045362835","https://openalex.org/W2056499061","https://openalex.org/W2063581247","https://openalex.org/W2065697119","https://openalex.org/W2075406901","https://openalex.org/W2078059415","https://openalex.org/W2081146141","https://openalex.org/W2085063163","https://openalex.org/W2094108329","https://openalex.org/W2094271958","https://openalex.org/W2122732537","https://openalex.org/W2122863289","https://openalex.org/W2124153471","https://openalex.org/W2135553161","https://openalex.org/W2140952049","https://openalex.org/W2146749911","https://openalex.org/W2160363806","https://openalex.org/W2170624222","https://openalex.org/W2171808845","https://openalex.org/W2224056471","https://openalex.org/W2329659234","https://openalex.org/W2409532517","https://openalex.org/W2468743286","https://openalex.org/W2533355719","https://openalex.org/W2541585197","https://openalex.org/W2559028527","https://openalex.org/W2560905785","https://openalex.org/W2767749844","https://openalex.org/W2770178180","https://openalex.org/W2785792383","https://openalex.org/W2804658429","https://openalex.org/W2915536738","https://openalex.org/W2918063357","https://openalex.org/W4250359879","https://openalex.org/W6605809434"],"related_works":["https://openalex.org/W2361861616","https://openalex.org/W2263699433","https://openalex.org/W2377979023","https://openalex.org/W2379997263","https://openalex.org/W1557222478","https://openalex.org/W2367493320","https://openalex.org/W2131580913","https://openalex.org/W2125854412","https://openalex.org/W3083097828","https://openalex.org/W2796029694"],"abstract_inverted_index":{"The":[0,25,156],"Animal":[1],"Transcription":[2],"Factor":[3],"DataBase":[4],"(AnimalTFDB)":[5],"is":[6],"a":[7,125,140,162,174],"resource":[8,176],"aimed":[9],"to":[10,39,47,56,131],"provide":[11],"the":[12,45,74,109,153],"most":[13],"comprehensive":[14,163],"and":[15,23,30,35,54,64,82,165,169,171,181],"accurate":[16,93],"information":[17,113],"for":[18,32,136,150,177],"animal":[19,71,122],"transcription":[20,66,101,182],"factors":[21],"(TFs)":[22],"cofactors.":[24],"AnimalTFDB":[26,46,59,160],"has":[27],"been":[28,85],"maintained":[29],"updated":[31,44],"seven":[33],"years":[34],"we":[36,43],"will":[37,172],"continue":[38],"improve":[40,57],"it.":[41,58],"Recently,":[42],"version":[48,158],"3.0":[49],"(http://bioinfo.life.hust.edu.cn/AnimalTFDB/)":[50],"with":[51],"more":[52,92],"data":[53,77],"functions":[55,83],"contains":[60],"125,135":[61],"TF":[62,94,104,118,126,143,180],"genes":[63,68],"80,060":[65],"cofactor":[67],"from":[69],"97":[70],"genomes.":[72],"Besides":[73],"expansion":[75],"in":[76,120],"quantity,":[78],"some":[79],"new":[80,88,157],"features":[81,89],"have":[84],"added.":[86],"These":[87],"are:":[90],"(i)":[91],"family":[95],"assignment":[96],"rules;":[97],"(ii)":[98],"classification":[99,166],"of":[100,114,159,167,179],"cofactors;":[102],"(iii)":[103],"binding":[105,127,134],"sites":[106],"information;":[107],"(iv)":[108],"GWAS":[110],"phenotype":[111],"related":[112],"human":[115,142,154],"TFs;":[116],"(v)":[117],"expressions":[119],"22":[121],"species;":[123],"(vi)":[124],"site":[128],"prediction":[129],"tool":[130],"identify":[132],"potential":[133],"TFs":[135,168],"nucleotide":[137],"sequences;":[138],"(vii)":[139],"separate":[141],"database":[144],"web":[145],"interface":[146],"(HumanTFDB)":[147],"was":[148],"designed":[149],"better":[151],"utilizing":[152],"TFs.":[155],"provides":[161],"annotation":[164],"cofactors,":[170],"be":[173],"useful":[175],"studies":[178],"regulation.":[183]},"counts_by_year":[{"year":2026,"cited_by_count":9},{"year":2025,"cited_by_count":81},{"year":2024,"cited_by_count":162},{"year":2023,"cited_by_count":179},{"year":2022,"cited_by_count":235},{"year":2021,"cited_by_count":132},{"year":2020,"cited_by_count":98},{"year":2019,"cited_by_count":36},{"year":2018,"cited_by_count":4}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
