{"id":"https://openalex.org/W2804662362","doi":"https://doi.org/10.1093/nar/gky424","title":"FragFit: a web-application for interactive modeling of protein segments into cryo-EM density maps","display_name":"FragFit: a web-application for interactive modeling of protein segments into cryo-EM density maps","publication_year":2018,"publication_date":"2018-05-10","ids":{"openalex":"https://openalex.org/W2804662362","doi":"https://doi.org/10.1093/nar/gky424","mag":"2804662362","pmid":"https://pubmed.ncbi.nlm.nih.gov/29788317"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gky424","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gky424","pdf_url":"https://academic.oup.com/nar/article-pdf/46/W1/W310/25110196/gky424.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/46/W1/W310/25110196/gky424.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5022624631","display_name":"Johanna K. S. Tiemann","orcid":"https://orcid.org/0000-0001-7551-6245"},"institutions":[{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I7877124"]},{"id":"https://openalex.org/I926574661","display_name":"Leipzig University","ror":"https://ror.org/03s7gtk40","country_code":"DE","type":"education","lineage":["https://openalex.org/I926574661"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Johanna KS Tiemann","raw_affiliation_strings":["Institute of Medical Physics and Biophysics, Charit\u00e9 University Medicine Berlin, Berlin 10117, Germany","Institute of Medical Physics and Biophysics, Medical University Leipzig, Leipzig, Sachsen 04107, Germany"],"raw_orcid":"https://orcid.org/0000-0001-7551-6245","affiliations":[{"raw_affiliation_string":"Institute of Medical Physics and Biophysics, Charit\u00e9 University Medicine Berlin, Berlin 10117, Germany","institution_ids":["https://openalex.org/I7877124"]},{"raw_affiliation_string":"Institute of Medical Physics and Biophysics, Medical University Leipzig, Leipzig, Sachsen 04107, Germany","institution_ids":["https://openalex.org/I926574661"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033139813","display_name":"Alexander Rose","orcid":"https://orcid.org/0000-0002-0893-5551"},"institutions":[{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I7877124"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Alexander S Rose","raw_affiliation_strings":["Institute of Medical Physics and Biophysics, Charit\u00e9 University Medicine Berlin, Berlin 10117, Germany"],"raw_orcid":"https://orcid.org/0000-0002-0893-5551","affiliations":[{"raw_affiliation_string":"Institute of Medical Physics and Biophysics, Charit\u00e9 University Medicine Berlin, Berlin 10117, Germany","institution_ids":["https://openalex.org/I7877124"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079732732","display_name":"Jochen Ismer","orcid":null},"institutions":[{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I7877124"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Jochen Ismer","raw_affiliation_strings":["Institute of Medical Physics and Biophysics, Charit\u00e9 University Medicine Berlin, Berlin 10117, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Medical Physics and Biophysics, Charit\u00e9 University Medicine Berlin, Berlin 10117, Germany","institution_ids":["https://openalex.org/I7877124"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067877745","display_name":"Mitra D Darvish","orcid":null},"institutions":[{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I7877124"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Mitra D Darvish","raw_affiliation_strings":["Institute of Medical Physics and Biophysics, Charit\u00e9 University Medicine Berlin, Berlin 10117, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Medical Physics and Biophysics, Charit\u00e9 University Medicine Berlin, Berlin 10117, Germany","institution_ids":["https://openalex.org/I7877124"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006768442","display_name":"Tarek Hilal","orcid":"https://orcid.org/0000-0002-7833-8058"},"institutions":[{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I7877124"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Tarek Hilal","raw_affiliation_strings":["Institute of Medical Physics and Biophysics, Charit\u00e9 University Medicine Berlin, Berlin 10117, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Medical Physics and Biophysics, Charit\u00e9 University Medicine Berlin, Berlin 10117, Germany","institution_ids":["https://openalex.org/I7877124"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102970624","display_name":"C.M.T. Spahn","orcid":"https://orcid.org/0000-0002-2939-9487"},"institutions":[{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I7877124"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Christian MT Spahn","raw_affiliation_strings":["Institute of Medical Physics and Biophysics, Charit\u00e9 University Medicine Berlin, Berlin 10117, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Medical Physics and Biophysics, Charit\u00e9 University Medicine Berlin, Berlin 10117, Germany","institution_ids":["https://openalex.org/I7877124"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5070831090","display_name":"Peter W. Hildebrand","orcid":"https://orcid.org/0000-0003-0063-1104"},"institutions":[{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I7877124"]},{"id":"https://openalex.org/I926574661","display_name":"Leipzig University","ror":"https://ror.org/03s7gtk40","country_code":"DE","type":"education","lineage":["https://openalex.org/I926574661"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Peter W Hildebrand","raw_affiliation_strings":["Institute of Medical Physics and Biophysics, Charit\u00e9 University Medicine Berlin, Berlin 10117, Germany","Institute of Medical Physics and Biophysics, Medical University Leipzig, Leipzig, Sachsen 04107, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Medical Physics and Biophysics, Charit\u00e9 University Medicine Berlin, Berlin 10117, Germany","institution_ids":["https://openalex.org/I7877124"]},{"raw_affiliation_string":"Institute of Medical Physics and Biophysics, Medical University Leipzig, Leipzig, Sachsen 04107, Germany","institution_ids":["https://openalex.org/I926574661"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5070831090"],"corresponding_institution_ids":["https://openalex.org/I7877124","https://openalex.org/I926574661"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":0.0,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.03787529,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"46","issue":"W1","first_page":"W310","last_page":"W314"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10857","display_name":"Advanced Electron Microscopy Techniques and Applications","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1315","display_name":"Structural Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10857","display_name":"Advanced Electron Microscopy Techniques and Applications","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1315","display_name":"Structural Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9894999861717224,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6347140073776245},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.5936221480369568},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.531796395778656},{"id":"https://openalex.org/keywords/protein-data-bank","display_name":"Protein Data Bank (RCSB PDB)","score":0.5081202983856201},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4824850857257843},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.4794553518295288},{"id":"https://openalex.org/keywords/interactive-visualization","display_name":"Interactive visualization","score":0.47750324010849},{"id":"https://openalex.org/keywords/cryo-electron-microscopy","display_name":"Cryo-electron microscopy","score":0.4261268675327301},{"id":"https://openalex.org/keywords/web-application","display_name":"Web application","score":0.4245809018611908},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.41339367628097534},{"id":"https://openalex.org/keywords/computer-graphics","display_name":"Computer graphics (images)","score":0.33973008394241333},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.33639344573020935},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.33441177010536194},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.21450448036193848},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.21418198943138123},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.19346174597740173},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.11012721061706543},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.10297903418540955}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6347140073776245},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.5936221480369568},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.531796395778656},{"id":"https://openalex.org/C65556437","wikidata":"https://www.wikidata.org/wiki/Q766195","display_name":"Protein Data Bank (RCSB PDB)","level":2,"score":0.5081202983856201},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4824850857257843},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.4794553518295288},{"id":"https://openalex.org/C64073096","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Interactive visualization","level":3,"score":0.47750324010849},{"id":"https://openalex.org/C20702342","wikidata":"https://www.wikidata.org/wiki/Q5190506","display_name":"Cryo-electron microscopy","level":2,"score":0.4261268675327301},{"id":"https://openalex.org/C118643609","wikidata":"https://www.wikidata.org/wiki/Q189210","display_name":"Web application","level":2,"score":0.4245809018611908},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.41339367628097534},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.33973008394241333},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.33639344573020935},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.33441177010536194},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.21450448036193848},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.21418198943138123},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.19346174597740173},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.11012721061706543},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.10297903418540955}],"mesh":[{"descriptor_ui":"D000596","descriptor_name":"Amino Acids","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000596","descriptor_name":"Amino Acids","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000596","descriptor_name":"Amino Acids","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000596","descriptor_name":"Amino Acids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000596","descriptor_name":"Amino Acids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000596","descriptor_name":"Amino Acids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020285","descriptor_name":"Cryoelectron Microscopy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020285","descriptor_name":"Cryoelectron Microscopy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020285","descriptor_name":"Cryoelectron Microscopy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gky424","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gky424","pdf_url":"https://academic.oup.com/nar/article-pdf/46/W1/W310/25110196/gky424.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:29788317","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29788317","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:europepmc.org:4991252","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6030921","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gky424","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gky424","pdf_url":"https://academic.oup.com/nar/article-pdf/46/W1/W310/25110196/gky424.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2959223987","display_name":null,"funder_award_id":"BI 893/8","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G3156432392","display_name":null,"funder_award_id":"SFB740/Z1","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G3488944867","display_name":null,"funder_award_id":"HI 1502/1-2","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G6677242881","display_name":null,"funder_award_id":"SFB740/B6","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"}],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2804662362.pdf","grobid_xml":"https://content.openalex.org/works/W2804662362.grobid-xml"},"referenced_works_count":27,"referenced_works":["https://openalex.org/W1594612692","https://openalex.org/W1984259239","https://openalex.org/W1994086483","https://openalex.org/W2008739377","https://openalex.org/W2009061886","https://openalex.org/W2035460215","https://openalex.org/W2048875539","https://openalex.org/W2048982317","https://openalex.org/W2048993935","https://openalex.org/W2051567790","https://openalex.org/W2053880783","https://openalex.org/W2069152576","https://openalex.org/W2085144661","https://openalex.org/W2097604487","https://openalex.org/W2104130324","https://openalex.org/W2109476464","https://openalex.org/W2124026197","https://openalex.org/W2133197076","https://openalex.org/W2162274915","https://openalex.org/W2168708922","https://openalex.org/W2296905753","https://openalex.org/W2338772837","https://openalex.org/W2488156821","https://openalex.org/W2560034634","https://openalex.org/W2638004687","https://openalex.org/W2765116378","https://openalex.org/W2768508562"],"related_works":["https://openalex.org/W2187425097","https://openalex.org/W2541456967","https://openalex.org/W78313762","https://openalex.org/W2088100162","https://openalex.org/W2022006485","https://openalex.org/W2107792420","https://openalex.org/W2361661870","https://openalex.org/W2391980762","https://openalex.org/W2291811199","https://openalex.org/W2804662362"],"abstract_inverted_index":{"Cryo-electron":[0],"microscopy":[1],"(cryo-EM)":[2],"is":[3,120],"a":[4,36,60,82,97],"standard":[5],"method":[6],"to":[7,17,46,124],"determine":[8],"the":[9,33,66,106],"three-dimensional":[10],"structures":[11,75],"of":[12,22,42,44,112],"molecular":[13,103],"complexes.":[14],"However,":[15],"easy":[16],"use":[18],"tools":[19],"for":[20,39],"modeling":[21,41],"protein":[23,83],"segments":[24,43],"into":[25,51,81,96],"cryo-EM":[26,52,99],"maps":[27],"are":[28,57,86],"sparse.":[29],"Here,":[30],"we":[31],"present":[32],"FragFit":[34,115],"web-application,":[35,116],"web":[37],"server":[38],"interactive":[40,110],"up":[45],"35":[47],"amino":[48],"acids":[49],"length":[50],"density":[53,100],"maps.":[54],"The":[55,114],"fragments":[56],"provided":[58],"by":[59],"regularly":[61],"updated":[62],"database":[63],"containing":[64],"at":[65,118],"moment":[67],"about":[68],"1":[69],"billion":[70],"entries":[71],"extracted":[72],"from":[73],"PDB":[74],"and":[76,94,122],"can":[77],"be":[78],"readily":[79],"integrated":[80],"structure.":[84],"Fragments":[85],"selected":[87],"based":[88],"on":[89],"geometric":[90],"criteria,":[91],"sequence":[92],"similarity":[93],"fit":[95],"given":[98],"map.":[101],"Web-based":[102],"visualization":[104],"with":[105],"NGL":[107],"Viewer":[108],"allows":[109],"selection":[111],"fragments.":[113],"accessible":[117],"http://proteinformatics.de/FragFit,":[119],"free":[121],"open":[123],"all":[125],"users,":[126],"without":[127],"any":[128],"login":[129],"requirements.":[130]},"counts_by_year":[{"year":2022,"cited_by_count":1}],"updated_date":"2026-06-12T08:23:45.883708","created_date":"2025-10-10T00:00:00"}
