{"id":"https://openalex.org/W2899616402","doi":"https://doi.org/10.1093/nar/gky1095","title":"The UCSC Genome Browser database: 2019 update","display_name":"The UCSC Genome Browser database: 2019 update","publication_year":2018,"publication_date":"2018-10-20","ids":{"openalex":"https://openalex.org/W2899616402","doi":"https://doi.org/10.1093/nar/gky1095","mag":"2899616402","pmid":"https://pubmed.ncbi.nlm.nih.gov/30407534"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gky1095","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gky1095","pdf_url":"https://academic.oup.com/nar/article-pdf/47/D1/D853/27437634/gky1095.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/47/D1/D853/27437634/gky1095.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5070184232","display_name":"Maximilian Haeussler","orcid":"https://orcid.org/0000-0001-8721-8253"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Maximilian Haeussler","raw_affiliation_strings":["Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034427205","display_name":"Ann S. Zweig","orcid":null},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ann S Zweig","raw_affiliation_strings":["Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022033677","display_name":"Cath Tyner","orcid":null},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cath Tyner","raw_affiliation_strings":["Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061395094","display_name":"Matthew L Speir","orcid":"https://orcid.org/0000-0002-2035-1129"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Matthew L Speir","raw_affiliation_strings":["Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044656439","display_name":"Kate R. Rosenbloom","orcid":"https://orcid.org/0000-0001-8799-4826"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kate R Rosenbloom","raw_affiliation_strings":["Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063722321","display_name":"Brian J. Raney","orcid":"https://orcid.org/0000-0002-9708-1390"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brian J Raney","raw_affiliation_strings":["Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101043912","display_name":"Christopher M Lee","orcid":null},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Christopher M Lee","raw_affiliation_strings":["Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085049971","display_name":"Brian T. Lee","orcid":"https://orcid.org/0000-0001-6382-9738"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brian T Lee","raw_affiliation_strings":["Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA"],"raw_orcid":"https://orcid.org/0000-0001-6382-9738","affiliations":[{"raw_affiliation_string":"Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031905987","display_name":"Angie S. Hinrichs","orcid":"https://orcid.org/0000-0002-1697-1130"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Angie S Hinrichs","raw_affiliation_strings":["Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082119497","display_name":"Jairo Navarro Gonzalez","orcid":"https://orcid.org/0000-0003-4022-4829"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jairo Navarro Gonzalez","raw_affiliation_strings":["Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058100439","display_name":"David Gibson","orcid":"https://orcid.org/0000-0001-6346-0993"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David Gibson","raw_affiliation_strings":["Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054009720","display_name":"Mark Diekhans","orcid":"https://orcid.org/0000-0002-0430-0989"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mark Diekhans","raw_affiliation_strings":["Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079146965","display_name":"Hiram Clawson","orcid":"https://orcid.org/0000-0002-0480-0545"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hiram Clawson","raw_affiliation_strings":["Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110217612","display_name":"Jonathan D. Casper","orcid":"https://orcid.org/0009-0009-5722-1916"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jonathan Casper","raw_affiliation_strings":["Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112697905","display_name":"Galt P Barber","orcid":null},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Galt P Barber","raw_affiliation_strings":["Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090849321","display_name":"David Haussler","orcid":"https://orcid.org/0000-0003-1533-4575"},"institutions":[{"id":"https://openalex.org/I1344073410","display_name":"Howard Hughes Medical Institute","ror":"https://ror.org/006w34k90","country_code":"US","type":"facility","lineage":["https://openalex.org/I1344073410"]},{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David Haussler","raw_affiliation_strings":["Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA","Howard Hughes Medical Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA","institution_ids":["https://openalex.org/I185103710"]},{"raw_affiliation_string":"Howard Hughes Medical Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA","institution_ids":["https://openalex.org/I1344073410","https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072909873","display_name":"Robert M. Kuhn","orcid":"https://orcid.org/0000-0001-8103-7793"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Robert M Kuhn","raw_affiliation_strings":["Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5105297342","display_name":"W. James Kent","orcid":null},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"W\u00a0James Kent","raw_affiliation_strings":["Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genomics Institute, University of California Santa Cruz, Santa Cruz, CA\u00a095064, USA","institution_ids":["https://openalex.org/I185103710"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":18,"corresponding_author_ids":["https://openalex.org/A5070184232"],"corresponding_institution_ids":["https://openalex.org/I185103710"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":69.1274,"has_fulltext":false,"cited_by_count":1059,"citation_normalized_percentile":{"value":0.99965573,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"47","issue":"D1","first_page":"D853","last_page":"D858"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/genome-browser","display_name":"Genome browser","score":0.9335057735443115},{"id":"https://openalex.org/keywords/refseq","display_name":"RefSeq","score":0.8278634548187256},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.6729444265365601},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.6367729902267456},{"id":"https://openalex.org/keywords/ensembl","display_name":"Ensembl","score":0.6292549967765808},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6138884425163269},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.5405735969543457},{"id":"https://openalex.org/keywords/human-genome","display_name":"Human genome","score":0.45552194118499756},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4512563645839691},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4249807596206665},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3824031352996826},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3748939335346222},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.33944839239120483},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.3204158544540405},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.313101589679718},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.1166718602180481}],"concepts":[{"id":"https://openalex.org/C2781148417","wikidata":"https://www.wikidata.org/wiki/Q5533486","display_name":"Genome browser","level":5,"score":0.9335057735443115},{"id":"https://openalex.org/C151810110","wikidata":"https://www.wikidata.org/wiki/Q7307074","display_name":"RefSeq","level":4,"score":0.8278634548187256},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6729444265365601},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.6367729902267456},{"id":"https://openalex.org/C141674004","wikidata":"https://www.wikidata.org/wiki/Q1344256","display_name":"Ensembl","level":5,"score":0.6292549967765808},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6138884425163269},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.5405735969543457},{"id":"https://openalex.org/C197077220","wikidata":"https://www.wikidata.org/wiki/Q720988","display_name":"Human genome","level":4,"score":0.45552194118499756},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4512563645839691},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4249807596206665},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3824031352996826},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3748939335346222},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.33944839239120483},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.3204158544540405},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.313101589679718},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.1166718602180481},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1093/nar/gky1095","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gky1095","pdf_url":"https://academic.oup.com/nar/article-pdf/47/D1/D853/27437634/gky1095.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:30407534","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30407534","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:ark:/13030/qt2769v9rs","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"pmh:oai:escholarship.org/ark:/13030/qt39j2120p","is_oa":false,"landing_page_url":"https://escholarship.org/uc/item/39j2120p","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic acids research, vol 47, iss D1","raw_type":"article"},{"id":"pmh:oai:escholarship.org:ark:/13030/qt2769v9rs","is_oa":true,"landing_page_url":"https://escholarship.org/uc/item/2769v9rs","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Research, vol 47, iss D1","raw_type":"article"},{"id":"pmh:oai:europepmc.org:5301942","is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC6323953","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:6323953","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6323953","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gky1095","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gky1095","pdf_url":"https://academic.oup.com/nar/article-pdf/47/D1/D853/27437634/gky1095.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1133173565","display_name":null,"funder_award_id":"GC1R-06673-C","funder_id":"https://openalex.org/F4320306171","funder_display_name":"California Institute for Regenerative Medicine"},{"id":"https://openalex.org/G1943589867","display_name":null,"funder_award_id":"4U41HG002371","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"},{"id":"https://openalex.org/G2244459568","display_name":null,"funder_award_id":"CBJCHBCAABAA-nBGXMxFrE0WG7VvHOtm8RAzv674WMNt","funder_id":"https://openalex.org/F4320311600","funder_display_name":"Regeneron Pharmaceuticals"},{"id":"https://openalex.org/G3985779196","display_name":null,"funder_award_id":"2018-182809","funder_id":"https://openalex.org/F4320306192","funder_display_name":"Silicon Valley Community Foundation"},{"id":"https://openalex.org/G5220980081","display_name":null,"funder_award_id":"2017-171519","funder_id":"https://openalex.org/F4320306192","funder_display_name":"Silicon Valley Community Foundation"},{"id":"https://openalex.org/G5231837375","display_name":null,"funder_award_id":"427053","funder_id":"https://openalex.org/F4320308906","funder_display_name":"St. Baldrick's Foundation"},{"id":"https://openalex.org/G6186121481","display_name":null,"funder_award_id":"1U01MH114825","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G6257438065","display_name":null,"funder_award_id":"090100","funder_id":"https://openalex.org/F4320306082","funder_display_name":"Howard Hughes Medical Institute"},{"id":"https://openalex.org/G7219114694","display_name":null,"funder_award_id":"5U41HG007234","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"},{"id":"https://openalex.org/G8236924658","display_name":null,"funder_award_id":"5U54HG007990","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"}],"funders":[{"id":"https://openalex.org/F4320306082","display_name":"Howard Hughes Medical Institute","ror":"https://ror.org/006w34k90"},{"id":"https://openalex.org/F4320306171","display_name":"California Institute for Regenerative Medicine","ror":"https://ror.org/033m8b439"},{"id":"https://openalex.org/F4320306192","display_name":"Silicon Valley Community Foundation","ror":"https://ror.org/001ader08"},{"id":"https://openalex.org/F4320308906","display_name":"St. Baldrick's Foundation","ror":"https://ror.org/03h1gea69"},{"id":"https://openalex.org/F4320311600","display_name":"Regeneron Pharmaceuticals","ror":"https://ror.org/02f51rf24"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337348","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2899616402.pdf"},"referenced_works_count":48,"referenced_works":["https://openalex.org/W1533942137","https://openalex.org/W2022495797","https://openalex.org/W2076154138","https://openalex.org/W2096465161","https://openalex.org/W2096525273","https://openalex.org/W2102659607","https://openalex.org/W2108797218","https://openalex.org/W2118930999","https://openalex.org/W2126958666","https://openalex.org/W2128016314","https://openalex.org/W2132073122","https://openalex.org/W2136145671","https://openalex.org/W2146734921","https://openalex.org/W2165697084","https://openalex.org/W2173732482","https://openalex.org/W2231865019","https://openalex.org/W2256016639","https://openalex.org/W2309021002","https://openalex.org/W2558947257","https://openalex.org/W2607211817","https://openalex.org/W2761275051","https://openalex.org/W2765745983","https://openalex.org/W2767743008","https://openalex.org/W2770178180","https://openalex.org/W2786189816","https://openalex.org/W4230397979","https://openalex.org/W4230784961","https://openalex.org/W4243601081","https://openalex.org/W4248735723","https://openalex.org/W4293196852","https://openalex.org/W4298053217","https://openalex.org/W6655885874","https://openalex.org/W6674364653","https://openalex.org/W6675450417","https://openalex.org/W6676115497","https://openalex.org/W6677847689","https://openalex.org/W6679007198","https://openalex.org/W6679079381","https://openalex.org/W6679415103","https://openalex.org/W6681770671","https://openalex.org/W6684389392","https://openalex.org/W6689664017","https://openalex.org/W6691995666","https://openalex.org/W6730577751","https://openalex.org/W6737198444","https://openalex.org/W6746280730","https://openalex.org/W6748559705","https://openalex.org/W6842402754"],"related_works":["https://openalex.org/W3109437984","https://openalex.org/W2042690128","https://openalex.org/W2152320398","https://openalex.org/W4392968970","https://openalex.org/W3111061871","https://openalex.org/W4401672078","https://openalex.org/W4224014283","https://openalex.org/W4234176501","https://openalex.org/W2041889388","https://openalex.org/W4384561511"],"abstract_inverted_index":{"The":[0],"UCSC":[1],"Genome":[2],"Browser":[3,18],"(https://genome.ucsc.edu)":[4],"is":[5],"a":[6,40,63,95],"graphical":[7],"viewer":[8],"for":[9,23,60,67,73],"exploring":[10],"genome":[11],"annotations.":[12],"For":[13],"almost":[14],"two":[15],"decades,":[16],"the":[17,76,100],"has":[19],"provided":[20],"visualization":[21],"tools":[22],"genetics":[24],"and":[25,28,34,70,93],"molecular":[26],"biology":[27],"continues":[29],"to":[30],"add":[31],"new":[32,41,52,58],"data":[33],"features.":[35],"This":[36],"year,":[37],"we":[38,79],"added":[39,81],"tool":[42],"that":[43],"lets":[44],"users":[45],"interactively":[46],"arrange":[47],"existing":[48],"graphing":[49],"tracks":[50],"into":[51],"groups.":[53],"Other":[54],"software":[55],"additions":[56],"include":[57],"formats":[59],"chromosome":[61],"interactions,":[62],"ChIP-Seq":[64],"peak":[65],"display":[66],"track":[68],"hubs":[69],"improved":[71],"support":[72],"HGVS.":[74],"On":[75],"annotation":[77],"side,":[78],"have":[80,106],"gnomAD,":[82],"TCGA":[83],"expression,":[84],"RefSeq":[85],"Functional":[86],"elements,":[87],"GTEx":[88],"eQTLs,":[89],"CRISPR":[90],"Guides,":[91],"SNPpedia":[92],"created":[94],"30-way":[96],"primate":[97],"alignment":[98],"on":[99],"human":[101],"genome.":[102],"Nine":[103],"assemblies":[104],"now":[105],"RefSeq-mapped":[107],"gene":[108],"models.":[109]},"counts_by_year":[{"year":2026,"cited_by_count":16},{"year":2025,"cited_by_count":37},{"year":2024,"cited_by_count":89},{"year":2023,"cited_by_count":86},{"year":2022,"cited_by_count":135},{"year":2021,"cited_by_count":253},{"year":2020,"cited_by_count":261},{"year":2019,"cited_by_count":129},{"year":2018,"cited_by_count":35},{"year":2017,"cited_by_count":15}],"updated_date":"2026-06-20T22:02:38.213706","created_date":"2025-10-10T00:00:00"}
