{"id":"https://openalex.org/W2899542898","doi":"https://doi.org/10.1093/nar/gky1061","title":"BioSamples database: an updated sample metadata hub","display_name":"BioSamples database: an updated sample metadata hub","publication_year":2018,"publication_date":"2018-10-18","ids":{"openalex":"https://openalex.org/W2899542898","doi":"https://doi.org/10.1093/nar/gky1061","mag":"2899542898","pmid":"https://pubmed.ncbi.nlm.nih.gov/30407529"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gky1061","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gky1061","pdf_url":"https://academic.oup.com/nar/article-pdf/47/D1/D1172/27437327/gky1061.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/47/D1/D1172/27437327/gky1061.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5008255694","display_name":"M\u00e9lanie Courtot","orcid":"https://orcid.org/0000-0002-9551-6370"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"M\u00e9lanie Courtot","raw_affiliation_strings":["EMBL-EBI, Wellcome Genome Campus, Hinxton CB10 1SD, UK"],"raw_orcid":"https://orcid.org/0000-0002-9551-6370","affiliations":[{"raw_affiliation_string":"EMBL-EBI, Wellcome Genome Campus, Hinxton CB10 1SD, UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007938955","display_name":"Luca Cherubin","orcid":"https://orcid.org/0000-0003-3992-7447"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Luca Cherubin","raw_affiliation_strings":["EMBL-EBI, Wellcome Genome Campus, Hinxton CB10 1SD, UK"],"raw_orcid":"https://orcid.org/0000-0003-3992-7447","affiliations":[{"raw_affiliation_string":"EMBL-EBI, Wellcome Genome Campus, Hinxton CB10 1SD, UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006667065","display_name":"Adam Faulconbridge","orcid":"https://orcid.org/0000-0002-4733-3270"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Adam Faulconbridge","raw_affiliation_strings":["EMBL-EBI, Wellcome Genome Campus, Hinxton CB10 1SD, UK"],"raw_orcid":"https://orcid.org/0000-0002-4733-3270","affiliations":[{"raw_affiliation_string":"EMBL-EBI, Wellcome Genome Campus, Hinxton CB10 1SD, UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047703519","display_name":"David Vaughan","orcid":"https://orcid.org/0000-0002-4374-3758"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Daniel Vaughan","raw_affiliation_strings":["EMBL-EBI, Wellcome Genome Campus, Hinxton CB10 1SD, UK"],"raw_orcid":"https://orcid.org/0000-0002-4374-3758","affiliations":[{"raw_affiliation_string":"EMBL-EBI, Wellcome Genome Campus, Hinxton CB10 1SD, UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048047600","display_name":"Matthew Green","orcid":"https://orcid.org/0000-0003-2771-9894"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Matthew Green","raw_affiliation_strings":["EMBL-EBI, Wellcome Genome Campus, Hinxton CB10 1SD, UK"],"raw_orcid":"https://orcid.org/0000-0003-2771-9894","affiliations":[{"raw_affiliation_string":"EMBL-EBI, Wellcome Genome Campus, Hinxton CB10 1SD, UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031861795","display_name":"David Richardson","orcid":"https://orcid.org/0000-0003-0247-9118"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"David Richardson","raw_affiliation_strings":["EMBL-EBI, Wellcome Genome Campus, Hinxton CB10 1SD, UK"],"raw_orcid":"https://orcid.org/0000-0003-0247-9118","affiliations":[{"raw_affiliation_string":"EMBL-EBI, Wellcome Genome Campus, Hinxton CB10 1SD, UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057125598","display_name":"Peter W. Harrison","orcid":"https://orcid.org/0000-0002-4007-2899"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Peter Harrison","raw_affiliation_strings":["EMBL-EBI, Wellcome Genome Campus, Hinxton CB10 1SD, UK"],"raw_orcid":"https://orcid.org/0000-0002-4007-2899","affiliations":[{"raw_affiliation_string":"EMBL-EBI, Wellcome Genome Campus, Hinxton CB10 1SD, UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051806625","display_name":"Patricia L. Whetzel","orcid":"https://orcid.org/0000-0002-3458-4839"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Patricia L Whetzel","raw_affiliation_strings":["EMBL-EBI, Wellcome Genome Campus, Hinxton CB10 1SD, UK"],"raw_orcid":"https://orcid.org/0000-0002-3458-4839","affiliations":[{"raw_affiliation_string":"EMBL-EBI, Wellcome Genome Campus, Hinxton CB10 1SD, UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020620537","display_name":"Helen Parkinson","orcid":"https://orcid.org/0000-0003-3035-4195"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Helen Parkinson","raw_affiliation_strings":["EMBL-EBI, Wellcome Genome Campus, Hinxton CB10 1SD, UK"],"raw_orcid":"https://orcid.org/0000-0003-3035-4195","affiliations":[{"raw_affiliation_string":"EMBL-EBI, Wellcome Genome Campus, Hinxton CB10 1SD, UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5007472686","display_name":"Tony Burdett","orcid":null},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Tony Burdett","raw_affiliation_strings":["EMBL-EBI, Wellcome Genome Campus, Hinxton CB10 1SD, UK"],"raw_orcid":"https://orcid.org/0000-0002-2513-5396","affiliations":[{"raw_affiliation_string":"EMBL-EBI, Wellcome Genome Campus, Hinxton CB10 1SD, UK","institution_ids":["https://openalex.org/I1303153112"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5008255694"],"corresponding_institution_ids":["https://openalex.org/I1303153112"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":3.1574,"has_fulltext":true,"cited_by_count":71,"citation_normalized_percentile":{"value":0.92996155,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"47","issue":"D1","first_page":"D1172","last_page":"D1178"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.993399977684021,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.8081620931625366},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.6500625610351562},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5707089304924011},{"id":"https://openalex.org/keywords/sample","display_name":"Sample (material)","score":0.46851325035095215},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.42012324929237366},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.4133203625679016},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.37353187799453735}],"concepts":[{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.8081620931625366},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.6500625610351562},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5707089304924011},{"id":"https://openalex.org/C198531522","wikidata":"https://www.wikidata.org/wiki/Q485146","display_name":"Sample (material)","level":2,"score":0.46851325035095215},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.42012324929237366},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.4133203625679016},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.37353187799453735},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C43617362","wikidata":"https://www.wikidata.org/wiki/Q170050","display_name":"Chromatography","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D018070","descriptor_name":"Biological Specimen Banks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018070","descriptor_name":"Biological Specimen Banks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018070","descriptor_name":"Biological Specimen Banks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1093/nar/gky1061","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gky1061","pdf_url":"https://academic.oup.com/nar/article-pdf/47/D1/D1172/27437327/gky1061.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:30407529","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30407529","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:doi:10.5281/zenodo.13514270","is_oa":true,"landing_page_url":"https://zotero.org/groups/5435545/items/A9L6I3FE","pdf_url":null,"source":{"id":"https://openalex.org/S4406922384","display_name":"Open MIND","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"JournalArticle"},{"id":"pmh:oai:europepmc.org:5301938","is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC6323949","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:6323949","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6323949","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gky1061","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gky1061","pdf_url":"https://academic.oup.com/nar/article-pdf/47/D1/D1172/27437327/gky1061.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure","score":0.6299999952316284}],"awards":[{"id":"https://openalex.org/G5779700699","display_name":null,"funder_award_id":"201535/Z/16/Z","funder_id":"https://openalex.org/F4320311904","funder_display_name":"Wellcome Trust"},{"id":"https://openalex.org/G6895010136","display_name":null,"funder_award_id":"098503/D/12/B","funder_id":"https://openalex.org/F4320334626","funder_display_name":"Medical Research Council"},{"id":"https://openalex.org/G7720482660","display_name":null,"funder_award_id":"EC-IMI-115582","funder_id":"https://openalex.org/F4320307892","funder_display_name":"European Bank for Reconstruction and Development"},{"id":"https://openalex.org/G7766404388","display_name":null,"funder_award_id":"098503/D/12/Z","funder_id":"https://openalex.org/F4320334626","funder_display_name":"Medical Research Council"},{"id":"https://openalex.org/G7986883930","display_name":null,"funder_award_id":"098503/D/12/A","funder_id":"https://openalex.org/F4320334626","funder_display_name":"Medical Research Council"},{"id":"https://openalex.org/G8378343848","display_name":null,"funder_award_id":"201535/Z/16/Z","funder_id":"https://openalex.org/F4320307874","funder_display_name":"Wellcome"}],"funders":[{"id":"https://openalex.org/F4320307874","display_name":"Wellcome","ror":"https://ror.org/029chgv08"},{"id":"https://openalex.org/F4320307892","display_name":"European Bank for Reconstruction and Development","ror":"https://ror.org/02sstxn62"},{"id":"https://openalex.org/F4320311904","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08"},{"id":"https://openalex.org/F4320334626","display_name":"Medical Research Council","ror":"https://ror.org/03x94j517"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2899542898.pdf","grobid_xml":"https://content.openalex.org/works/W2899542898.grobid-xml"},"referenced_works_count":24,"referenced_works":["https://openalex.org/W1567333450","https://openalex.org/W1935434993","https://openalex.org/W1964904043","https://openalex.org/W1973234126","https://openalex.org/W2019956931","https://openalex.org/W2036288429","https://openalex.org/W2053551770","https://openalex.org/W2120908187","https://openalex.org/W2121253798","https://openalex.org/W2147018385","https://openalex.org/W2525035644","https://openalex.org/W2530086808","https://openalex.org/W2593312496","https://openalex.org/W2611603562","https://openalex.org/W2612519453","https://openalex.org/W2613179652","https://openalex.org/W2626316678","https://openalex.org/W2745006471","https://openalex.org/W2762393335","https://openalex.org/W2768838077","https://openalex.org/W2805978167","https://openalex.org/W2897745988","https://openalex.org/W4213108508","https://openalex.org/W4229527776"],"related_works":["https://openalex.org/W2058118494","https://openalex.org/W2392768766","https://openalex.org/W2382021449","https://openalex.org/W2095118173","https://openalex.org/W2106424170","https://openalex.org/W1985426483","https://openalex.org/W2501188010","https://openalex.org/W4299935056","https://openalex.org/W2010935248","https://openalex.org/W2768810474"],"abstract_inverted_index":{"The":[0,34,81,118,212],"BioSamples":[1,19,82,119,161,213],"database":[2,120,162,214],"at":[3,195,218,230],"EMBL-EBI":[4,17,140,225],"provides":[5],"a":[6,72],"central":[7],"hub":[8],"for":[9,126,135,148,205],"sample":[10,79,129,141,149],"metadata":[11,142],"storage":[12],"and":[13,31,67,76,106,138,151,155,166,178,208],"linkage":[14],"to":[15,48,87,152,175],"other":[16,68],"resources.":[18],"has":[20,37,84,172],"recently":[21],"undergone":[22],"major":[23],"changes,":[24],"both":[25],"in":[26,46,54,91],"terms":[27],"of":[28,78,94,114,180,227],"data":[29,35,58],"content":[30,36],"supporting":[32],"infrastructure.":[33],"more":[38],"than":[39],"doubled":[40],"from":[41,112],"around":[42],"2":[43],"million":[44,52],"samples":[45,53],"2014":[47],"just":[49],"over":[50],"5":[51],"2018.":[55],"Fast,":[56],"reciprocal":[57],"exchange":[59],"was":[60],"fully":[61],"established":[62],"between":[63],"sister":[64],"Biosample":[65],"databases":[66],"INSDC":[69,128],"partners,":[70],"enabling":[71],"worldwide":[73],"common":[74],"representation":[75],"centralization":[77],"metadata.":[80],"platform":[83],"been":[85,173],"upgraded":[86,159],"accommodate":[88],"anticipated":[89,209],"increases":[90],"the":[92,102,107,123,139,160,170,224],"number":[93],"submissions":[95],"via":[96],"GA4GH":[97],"driver":[98],"projects":[99],"such":[100,186],"as":[101,109,111,187,200,202],"Human":[103],"Cell":[104],"Atlas":[105],"EGA,":[108],"well":[110,201],"mirroring":[113],"NCBI":[115],"dbGaP":[116],"data.":[117],"is":[121,215,221],"now":[122],"authoritative":[124],"repository":[125],"all":[127],"metadata,":[130],"an":[131],"ELIXIR":[132],"Deposition":[133],"Database":[134],"Biomolecular":[136],"Data":[137],"hub.":[143],"To":[144],"support":[145],"faster":[146],"turnaround":[147],"submission,":[150],"increase":[153],"scalability":[154],"resilience,":[156],"we":[157],"have":[158],"backend":[163],"storage,":[164],"APIs":[165],"user":[167],"interface.":[168],"Finally,":[169],"website":[171],"redesigned":[174],"allow":[176],"search":[177],"retrieval":[179],"records":[181],"based":[182],"on":[183],"specific":[184],"filters,":[185],"'disease'":[188],"or":[189],"'organism'.":[190],"These":[191],"changes":[192],"are":[193],"targeted":[194],"answering":[196],"current":[197],"use":[198],"cases":[199],"providing":[203],"functionalities":[204],"future":[206],"emerging":[207],"developments.":[210],"Availability:":[211],"freely":[216],"available":[217,229],"http://www.ebi.ac.uk/biosamples.":[219],"Content":[220],"distributed":[222],"under":[223],"Terms":[226],"Use":[228],"https://www.ebi.ac.uk/about/terms-of-use.":[231]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":7},{"year":2024,"cited_by_count":10},{"year":2023,"cited_by_count":12},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":21},{"year":2020,"cited_by_count":9},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":1}],"updated_date":"2026-07-06T08:01:05.025921","created_date":"2025-10-10T00:00:00"}