{"id":"https://openalex.org/W3136918052","doi":"https://doi.org/10.1093/nar/gky1049","title":"UniProt: a worldwide hub of protein knowledge","display_name":"UniProt: a worldwide hub of protein knowledge","publication_year":2018,"publication_date":"2018-10-18","ids":{"openalex":"https://openalex.org/W3136918052","doi":"https://doi.org/10.1093/nar/gky1049","mag":"3136918052","pmid":"https://pubmed.ncbi.nlm.nih.gov/30395287"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gky1049","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gky1049","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/nar/gky1049","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"The UniProt Consortium","orcid":null},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"The UniProt Consortium","raw_affiliation_strings":[],"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":421.0054,"has_fulltext":false,"cited_by_count":8281,"citation_normalized_percentile":{"value":0.99998002,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"47","issue":"D1","first_page":"D506","last_page":"D515"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/uniprot","display_name":"UniProt","score":0.9877855777740479},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7378277778625488},{"id":"https://openalex.org/keywords/proteome","display_name":"Proteome","score":0.7175172567367554},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.5867682099342346},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5225836038589478},{"id":"https://openalex.org/keywords/license","display_name":"License","score":0.4885810315608978},{"id":"https://openalex.org/keywords/mit-license","display_name":"MIT License","score":0.4539168179035187},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.38060450553894043},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3638916611671448},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.29832667112350464},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.13790196180343628},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.0781758725643158}],"concepts":[{"id":"https://openalex.org/C202264299","wikidata":"https://www.wikidata.org/wiki/Q905695","display_name":"UniProt","level":3,"score":0.9877855777740479},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7378277778625488},{"id":"https://openalex.org/C104397665","wikidata":"https://www.wikidata.org/wiki/Q860947","display_name":"Proteome","level":2,"score":0.7175172567367554},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.5867682099342346},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5225836038589478},{"id":"https://openalex.org/C2780560020","wikidata":"https://www.wikidata.org/wiki/Q79719","display_name":"License","level":2,"score":0.4885810315608978},{"id":"https://openalex.org/C174183944","wikidata":"https://www.wikidata.org/wiki/Q334661","display_name":"MIT License","level":3,"score":0.4539168179035187},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.38060450553894043},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3638916611671448},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.29832667112350464},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.13790196180343628},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0781758725643158},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051188","descriptor_name":"Knowledge Bases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051188","descriptor_name":"Knowledge Bases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051188","descriptor_name":"Knowledge Bases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051188","descriptor_name":"Knowledge Bases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gky1049","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gky1049","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:30395287","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30395287","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:europepmc.org:5301981","is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC6323992","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:6323992","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6323992","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gky1049","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gky1049","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1819449706","display_name":null,"funder_award_id":"U41HG002273","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"},{"id":"https://openalex.org/G3887245887","display_name":null,"funder_award_id":"BB/M011674/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G563851893","display_name":null,"funder_award_id":"U01GM120953","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G6256350105","display_name":null,"funder_award_id":"U24HG007822","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7191686802","display_name":null,"funder_award_id":"U41HG007822","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"},{"id":"https://openalex.org/G779808820","display_name":"Expanding the knowledge of structures and functional information through the SIFTS resource","funder_award_id":"BB/M011674/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G8269682673","display_name":null,"funder_award_id":"R01GM080646","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G8295815155","display_name":null,"funder_award_id":"P20GM103446","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G956801073","display_name":null,"funder_award_id":"RG/13/5/30112","funder_id":"https://openalex.org/F4320319992","funder_display_name":"British Heart Foundation"}],"funders":[{"id":"https://openalex.org/F4320319992","display_name":"British Heart Foundation","ror":"https://ror.org/02wdwnk04"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"},{"id":"https://openalex.org/F4320337348","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":34,"referenced_works":["https://openalex.org/W1935434993","https://openalex.org/W1995683190","https://openalex.org/W2021210077","https://openalex.org/W2022484447","https://openalex.org/W2022770379","https://openalex.org/W2053551770","https://openalex.org/W2064795263","https://openalex.org/W2088382887","https://openalex.org/W2102461176","https://openalex.org/W2115746733","https://openalex.org/W2120141270","https://openalex.org/W2127589936","https://openalex.org/W2154139219","https://openalex.org/W2288906059","https://openalex.org/W2316262244","https://openalex.org/W2324589236","https://openalex.org/W2403990263","https://openalex.org/W2472887612","https://openalex.org/W2520925527","https://openalex.org/W2525128349","https://openalex.org/W2528456062","https://openalex.org/W2559577985","https://openalex.org/W2604823638","https://openalex.org/W2604973964","https://openalex.org/W2752636837","https://openalex.org/W2766822634","https://openalex.org/W2787247269","https://openalex.org/W2791349417","https://openalex.org/W2952894920","https://openalex.org/W2952944698","https://openalex.org/W4210702584","https://openalex.org/W4250359879","https://openalex.org/W4252710376","https://openalex.org/W6733674843"],"related_works":["https://openalex.org/W2036021480","https://openalex.org/W2288906059","https://openalex.org/W4376862128","https://openalex.org/W4296966554","https://openalex.org/W2030530458","https://openalex.org/W2546377002","https://openalex.org/W2546159719","https://openalex.org/W4285209474","https://openalex.org/W2296132555","https://openalex.org/W22571951"],"abstract_inverted_index":{"The":[0,103],"UniProt":[1,104,126],"Knowledgebase":[2],"is":[3],"a":[4,35,131],"collection":[5],"of":[6,18,37,83,99,117],"sequences":[7],"and":[8,52,89,124],"annotations":[9,21,41,45],"for":[10,32,113],"over":[11,33,69],"120":[12],"million":[13,36],"proteins":[14,118],"across":[15],"all":[16],"branches":[17],"life.":[19],"Detailed":[20],"extracted":[22],"from":[23,55],"the":[24,70,75,81,97,114,136],"literature":[25],"by":[26,44,47],"expert":[27],"curators":[28],"have":[29,67,78,93],"been":[30,107],"collected":[31],"half":[34],"these":[38],"proteins.":[39],"These":[40],"are":[42,128],"supplemented":[43],"provided":[46],"rule":[48],"based":[49],"automated":[50],"systems,":[51],"those":[53],"imported":[54],"other":[56],"resources.":[57],"In":[58],"this":[59],"article":[60],"we":[61,66,87,92],"describe":[62],"significant":[63],"updates":[64],"that":[65,86],"made":[68],"last":[71],"2":[72],"years":[73],"to":[74],"resource.":[76],"We":[77],"greatly":[79],"expanded":[80],"number":[82,98],"Reference":[84,101],"Proteomes":[85],"provide":[88],"in":[90],"particular":[91],"focussed":[94],"on":[95],"improving":[96],"viral":[100],"Proteomes.":[102],"website":[105],"has":[106],"augmented":[108],"with":[109],"new":[110],"data":[111],"visualizations":[112],"subcellular":[115],"localization":[116],"as":[119,121],"well":[120],"their":[122],"structure":[123],"interactions.":[125],"resources":[127],"available":[129],"under":[130],"CC-BY":[132],"(4.0)":[133],"license":[134],"via":[135],"web":[137],"at":[138],"https://www.uniprot.org/.":[139]},"counts_by_year":[{"year":2026,"cited_by_count":116},{"year":2025,"cited_by_count":714},{"year":2024,"cited_by_count":902},{"year":2023,"cited_by_count":892},{"year":2022,"cited_by_count":1205},{"year":2021,"cited_by_count":2021},{"year":2020,"cited_by_count":1887},{"year":2019,"cited_by_count":523},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
