{"id":"https://openalex.org/W2904155504","doi":"https://doi.org/10.1093/nar/gky1008","title":"gcMeta: a Global Catalogue of Metagenomics platform to support the archiving, standardization and analysis of microbiome data","display_name":"gcMeta: a Global Catalogue of Metagenomics platform to support the archiving, standardization and analysis of microbiome data","publication_year":2018,"publication_date":"2018-10-13","ids":{"openalex":"https://openalex.org/W2904155504","doi":"https://doi.org/10.1093/nar/gky1008","mag":"2904155504","pmid":"https://pubmed.ncbi.nlm.nih.gov/30365027"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gky1008","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gky1008","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/nar/gky1008","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5085232801","display_name":"Wenyu Shi","orcid":"https://orcid.org/0000-0001-7036-8917"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"funder","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210134982","display_name":"Institute of Microbiology","ror":"https://ror.org/047yhep71","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210134982"]},{"id":"https://openalex.org/I4210124148","display_name":"Microbiology Institute of Shaanxi","ror":"https://ror.org/02wt4jg41","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210124148"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wenyu Shi","raw_affiliation_strings":["Microbial Resource and Big Data Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Microbial Resource and Big Data Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China","institution_ids":["https://openalex.org/I4210124148","https://openalex.org/I4210134982","https://openalex.org/I19820366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054274917","display_name":"Heyuan Qi","orcid":null},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"funder","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210134982","display_name":"Institute of Microbiology","ror":"https://ror.org/047yhep71","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210134982"]},{"id":"https://openalex.org/I4210124148","display_name":"Microbiology Institute of Shaanxi","ror":"https://ror.org/02wt4jg41","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210124148"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Heyuan Qi","raw_affiliation_strings":["Microbial Resource and Big Data Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Microbial Resource and Big Data Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China","institution_ids":["https://openalex.org/I4210124148","https://openalex.org/I4210134982","https://openalex.org/I19820366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038075995","display_name":"Qinglan Sun","orcid":"https://orcid.org/0000-0002-8451-760X"},"institutions":[{"id":"https://openalex.org/I4210124148","display_name":"Microbiology Institute of Shaanxi","ror":"https://ror.org/02wt4jg41","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210124148"]},{"id":"https://openalex.org/I4210134982","display_name":"Institute of Microbiology","ror":"https://ror.org/047yhep71","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210134982"]},{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"funder","lineage":["https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qinglan Sun","raw_affiliation_strings":["Microbial Resource and Big Data Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Microbial Resource and Big Data Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China","institution_ids":["https://openalex.org/I4210124148","https://openalex.org/I4210134982","https://openalex.org/I19820366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071744721","display_name":"Guomei Fan","orcid":null},"institutions":[{"id":"https://openalex.org/I4210134982","display_name":"Institute of Microbiology","ror":"https://ror.org/047yhep71","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210134982"]},{"id":"https://openalex.org/I4210124148","display_name":"Microbiology Institute of Shaanxi","ror":"https://ror.org/02wt4jg41","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210124148"]},{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"funder","lineage":["https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Guomei Fan","raw_affiliation_strings":["Microbial Resource and Big Data Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Microbial Resource and Big Data Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China","institution_ids":["https://openalex.org/I4210124148","https://openalex.org/I4210134982","https://openalex.org/I19820366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009810201","display_name":"Shuang\u2010Jiang Liu","orcid":"https://orcid.org/0000-0002-7585-310X"},"institutions":[{"id":"https://openalex.org/I4210124148","display_name":"Microbiology Institute of Shaanxi","ror":"https://ror.org/02wt4jg41","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210124148"]},{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"funder","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210134982","display_name":"Institute of Microbiology","ror":"https://ror.org/047yhep71","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210134982"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shuangjiang Liu","raw_affiliation_strings":["Microbial Resource and Big Data Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China","State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Microbial Resource and Big Data Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China","institution_ids":["https://openalex.org/I4210124148","https://openalex.org/I4210134982","https://openalex.org/I19820366"]},{"raw_affiliation_string":"State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China","institution_ids":["https://openalex.org/I4210124148","https://openalex.org/I4210134982","https://openalex.org/I19820366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111964102","display_name":"Jun Wang","orcid":"https://orcid.org/0009-0008-8475-2934"},"institutions":[{"id":"https://openalex.org/I4210134982","display_name":"Institute of Microbiology","ror":"https://ror.org/047yhep71","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210134982"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jun Wang","raw_affiliation_strings":["CAS Key Laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Science, Beijing 100101, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CAS Key Laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Science, Beijing 100101, China","institution_ids":["https://openalex.org/I4210134982"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112530709","display_name":"Baoli Zhu","orcid":"https://orcid.org/0000-0001-5326-9503"},"institutions":[{"id":"https://openalex.org/I4210134982","display_name":"Institute of Microbiology","ror":"https://ror.org/047yhep71","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210134982"]},{"id":"https://openalex.org/I4210166576","display_name":"First Affiliated Hospital Zhejiang University","ror":"https://ror.org/05m1p5x56","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210166576"]},{"id":"https://openalex.org/I4210165038","display_name":"University of Chinese Academy of Sciences","ror":"https://ror.org/05qbk4x57","country_code":"CN","type":"education","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210165038"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Baoli Zhu","raw_affiliation_strings":["Beijing Key Laboratory of Antimicrobial Resistance and Pathogen Genomics, Beijing 100101, China","CAS Key Laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Science, Beijing 100101, China","Collaborative Innovation Centre for Diagnosis and Treatment of Infectious Diseases First Attainted Hospital, College of Medicine, Zhejiang University, Hangzhou 310058, China","University of Chinese Academy of Sciences, Beijing 100049, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Beijing Key Laboratory of Antimicrobial Resistance and Pathogen Genomics, Beijing 100101, China","institution_ids":[]},{"raw_affiliation_string":"CAS Key Laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Science, Beijing 100101, China","institution_ids":["https://openalex.org/I4210134982"]},{"raw_affiliation_string":"Collaborative Innovation Centre for Diagnosis and Treatment of Infectious Diseases First Attainted Hospital, College of Medicine, Zhejiang University, Hangzhou 310058, China","institution_ids":["https://openalex.org/I4210166576"]},{"raw_affiliation_string":"University of Chinese Academy of Sciences, Beijing 100049, China","institution_ids":["https://openalex.org/I4210165038"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100411964","display_name":"Hongwei Liu","orcid":"https://orcid.org/0000-0003-2501-7813"},"institutions":[{"id":"https://openalex.org/I4210134982","display_name":"Institute of Microbiology","ror":"https://ror.org/047yhep71","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210134982"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hongwei Liu","raw_affiliation_strings":["State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Science, Beijing 100101, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Science, Beijing 100101, China","institution_ids":["https://openalex.org/I4210134982"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087698339","display_name":"Fangqing Zhao","orcid":"https://orcid.org/0000-0002-6216-1235"},"institutions":[{"id":"https://openalex.org/I2801577699","display_name":"Beijing Institute of Genomics","ror":"https://ror.org/049gn7z52","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I2801577699"]},{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"funder","lineage":["https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Fangqing Zhao","raw_affiliation_strings":["Computational Genomics Lab, Beijing Institutes of Life Science, Chinese Academy of Sciences, Beijing 100101, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Genomics Lab, Beijing Institutes of Life Science, Chinese Academy of Sciences, Beijing 100101, China","institution_ids":["https://openalex.org/I2801577699","https://openalex.org/I19820366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100401920","display_name":"Xiaochen Wang","orcid":"https://orcid.org/0000-0002-4344-0925"},"institutions":[{"id":"https://openalex.org/I4210134982","display_name":"Institute of Microbiology","ror":"https://ror.org/047yhep71","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210134982"]},{"id":"https://openalex.org/I4210124148","display_name":"Microbiology Institute of Shaanxi","ror":"https://ror.org/02wt4jg41","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210124148"]},{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"funder","lineage":["https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaochen Wang","raw_affiliation_strings":["Microbial Resource and Big Data Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Microbial Resource and Big Data Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China","institution_ids":["https://openalex.org/I4210124148","https://openalex.org/I4210134982","https://openalex.org/I19820366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003604316","display_name":"Xiaoxuan Hu","orcid":"https://orcid.org/0000-0002-0907-065X"},"institutions":[{"id":"https://openalex.org/I4210134982","display_name":"Institute of Microbiology","ror":"https://ror.org/047yhep71","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210134982"]},{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"funder","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210124148","display_name":"Microbiology Institute of Shaanxi","ror":"https://ror.org/02wt4jg41","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210124148"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaoxuan Hu","raw_affiliation_strings":["Microbial Resource and Big Data Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Microbial Resource and Big Data Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China","institution_ids":["https://openalex.org/I4210124148","https://openalex.org/I4210134982","https://openalex.org/I19820366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100318396","display_name":"Wei Li","orcid":"https://orcid.org/0000-0003-2133-2576"},"institutions":[{"id":"https://openalex.org/I4210134982","display_name":"Institute of Microbiology","ror":"https://ror.org/047yhep71","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210134982"]},{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"funder","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210124148","display_name":"Microbiology Institute of Shaanxi","ror":"https://ror.org/02wt4jg41","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210124148"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wei Li","raw_affiliation_strings":["Microbial Resource and Big Data Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Microbial Resource and Big Data Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China","institution_ids":["https://openalex.org/I4210124148","https://openalex.org/I4210134982","https://openalex.org/I19820366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100409741","display_name":"Jia Liu","orcid":"https://orcid.org/0000-0003-0383-0934"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"funder","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210108629","display_name":"Computer Network Information Center","ror":"https://ror.org/01s0wyf50","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210108629"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jia Liu","raw_affiliation_strings":["Internet of Things Information Technology and Application Laboratory, Computer Network Information Center, Chinese Academy of Sciences. Beijing 100101, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Internet of Things Information Technology and Application Laboratory, Computer Network Information Center, Chinese Academy of Sciences. Beijing 100101, China","institution_ids":["https://openalex.org/I4210108629","https://openalex.org/I19820366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088657051","display_name":"Ye Tian","orcid":"https://orcid.org/0000-0002-7675-9270"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"funder","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210108629","display_name":"Computer Network Information Center","ror":"https://ror.org/01s0wyf50","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210108629"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ye Tian","raw_affiliation_strings":["Internet of Things Information Technology and Application Laboratory, Computer Network Information Center, Chinese Academy of Sciences. Beijing 100101, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Internet of Things Information Technology and Application Laboratory, Computer Network Information Center, Chinese Academy of Sciences. Beijing 100101, China","institution_ids":["https://openalex.org/I4210108629","https://openalex.org/I19820366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110238057","display_name":"Linhuan Wu","orcid":"https://orcid.org/0000-0002-5255-1846"},"institutions":[{"id":"https://openalex.org/I4210134982","display_name":"Institute of Microbiology","ror":"https://ror.org/047yhep71","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210134982"]},{"id":"https://openalex.org/I4210124148","display_name":"Microbiology Institute of Shaanxi","ror":"https://ror.org/02wt4jg41","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210124148"]},{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"funder","lineage":["https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Linhuan Wu","raw_affiliation_strings":["Microbial Resource and Big Data Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China","State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Microbial Resource and Big Data Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China","institution_ids":["https://openalex.org/I4210124148","https://openalex.org/I4210134982","https://openalex.org/I19820366"]},{"raw_affiliation_string":"State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China","institution_ids":["https://openalex.org/I4210124148","https://openalex.org/I4210134982","https://openalex.org/I19820366"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5102716455","display_name":"Juncai Ma","orcid":"https://orcid.org/0000-0001-6382-8014"},"institutions":[{"id":"https://openalex.org/I4210124148","display_name":"Microbiology Institute of Shaanxi","ror":"https://ror.org/02wt4jg41","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210124148"]},{"id":"https://openalex.org/I4210134982","display_name":"Institute of Microbiology","ror":"https://ror.org/047yhep71","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210134982"]},{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"funder","lineage":["https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Juncai Ma","raw_affiliation_strings":["Microbial Resource and Big Data Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China","State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Microbial Resource and Big Data Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China","institution_ids":["https://openalex.org/I4210124148","https://openalex.org/I4210134982","https://openalex.org/I19820366"]},{"raw_affiliation_string":"State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China","institution_ids":["https://openalex.org/I4210124148","https://openalex.org/I4210134982","https://openalex.org/I19820366"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5102716455","https://openalex.org/A5110238057"],"corresponding_institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210124148","https://openalex.org/I4210134982"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":4.1493,"has_fulltext":false,"cited_by_count":111,"citation_normalized_percentile":{"value":0.95299071,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"47","issue":"D1","first_page":"D637","last_page":"D648"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9918000102043152,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.7899972796440125},{"id":"https://openalex.org/keywords/metagenomics","display_name":"Metagenomics","score":0.7709956169128418},{"id":"https://openalex.org/keywords/microbiome","display_name":"Microbiome","score":0.6812922954559326},{"id":"https://openalex.org/keywords/standardization","display_name":"Standardization","score":0.6491492986679077},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.5707206130027771},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5648941993713379},{"id":"https://openalex.org/keywords/human-microbiome-project","display_name":"Human Microbiome Project","score":0.5433297157287598},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.4626940190792084},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.44468817114830017},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.43978214263916016},{"id":"https://openalex.org/keywords/service","display_name":"Service (business)","score":0.4322070777416229},{"id":"https://openalex.org/keywords/data-curation","display_name":"Data curation","score":0.43063294887542725},{"id":"https://openalex.org/keywords/data-management","display_name":"Data management","score":0.41511070728302},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.2936599850654602},{"id":"https://openalex.org/keywords/human-microbiome","display_name":"Human microbiome","score":0.27755042910575867},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.27545833587646484},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.2124628722667694}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.7899972796440125},{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.7709956169128418},{"id":"https://openalex.org/C143121216","wikidata":"https://www.wikidata.org/wiki/Q1330402","display_name":"Microbiome","level":2,"score":0.6812922954559326},{"id":"https://openalex.org/C188087704","wikidata":"https://www.wikidata.org/wiki/Q369577","display_name":"Standardization","level":2,"score":0.6491492986679077},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5707206130027771},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5648941993713379},{"id":"https://openalex.org/C190944805","wikidata":"https://www.wikidata.org/wiki/Q3922751","display_name":"Human Microbiome Project","level":4,"score":0.5433297157287598},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.4626940190792084},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.44468817114830017},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.43978214263916016},{"id":"https://openalex.org/C2780378061","wikidata":"https://www.wikidata.org/wiki/Q25351891","display_name":"Service (business)","level":2,"score":0.4322070777416229},{"id":"https://openalex.org/C91632574","wikidata":"https://www.wikidata.org/wiki/Q15088675","display_name":"Data curation","level":2,"score":0.43063294887542725},{"id":"https://openalex.org/C1668388","wikidata":"https://www.wikidata.org/wiki/Q1149776","display_name":"Data management","level":2,"score":0.41511070728302},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.2936599850654602},{"id":"https://openalex.org/C91478284","wikidata":"https://www.wikidata.org/wiki/Q6623796","display_name":"Human microbiome","level":3,"score":0.27755042910575867},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.27545833587646484},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.2124628722667694},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.0},{"id":"https://openalex.org/C136264566","wikidata":"https://www.wikidata.org/wiki/Q159810","display_name":"Economy","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D012015","descriptor_name":"Reference Standards","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012015","descriptor_name":"Reference Standards","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012015","descriptor_name":"Reference Standards","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054892","descriptor_name":"Metagenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054892","descriptor_name":"Metagenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054892","descriptor_name":"Metagenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gky1008","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gky1008","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:30365027","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30365027","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:europepmc.org:5301993","is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC6324004","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:6324004","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6324004","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gky1008","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gky1008","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.49000000953674316,"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17"}],"awards":[{"id":"https://openalex.org/G4319471460","display_name":null,"funder_award_id":"XDA19050301","funder_id":"https://openalex.org/F4320321133","funder_display_name":"Chinese Academy of Sciences"},{"id":"https://openalex.org/G4962074893","display_name":null,"funder_award_id":"31701157","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5670774991","display_name":null,"funder_award_id":"KFZD-SW-219","funder_id":"https://openalex.org/F4320321133","funder_display_name":"Chinese Academy of Sciences"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321133","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":114,"referenced_works":["https://openalex.org/W1496933752","https://openalex.org/W1541618341","https://openalex.org/W1574680346","https://openalex.org/W1584790813","https://openalex.org/W1866250228","https://openalex.org/W1878521557","https://openalex.org/W1973862547","https://openalex.org/W1983403167","https://openalex.org/W1983882630","https://openalex.org/W1985283768","https://openalex.org/W1991056282","https://openalex.org/W1991731239","https://openalex.org/W1997673861","https://openalex.org/W2010002522","https://openalex.org/W2014099509","https://openalex.org/W2022366078","https://openalex.org/W2022986961","https://openalex.org/W2031893281","https://openalex.org/W2036897871","https://openalex.org/W2036913140","https://openalex.org/W2039680623","https://openalex.org/W2045204781","https://openalex.org/W2045843097","https://openalex.org/W2055043387","https://openalex.org/W2065128082","https://openalex.org/W2069689025","https://openalex.org/W2072970694","https://openalex.org/W2096093282","https://openalex.org/W2100305481","https://openalex.org/W2100670078","https://openalex.org/W2102278945","https://openalex.org/W2103441770","https://openalex.org/W2103901746","https://openalex.org/W2103962160","https://openalex.org/W2104005232","https://openalex.org/W2107282968","https://openalex.org/W2107772251","https://openalex.org/W2108234281","https://openalex.org/W2109848222","https://openalex.org/W2110300022","https://openalex.org/W2110392562","https://openalex.org/W2111350087","https://openalex.org/W2111829451","https://openalex.org/W2112364185","https://openalex.org/W2113679889","https://openalex.org/W2113915152","https://openalex.org/W2116041602","https://openalex.org/W2120902911","https://openalex.org/W2124927293","https://openalex.org/W2126419817","https://openalex.org/W2129687578","https://openalex.org/W2129744420","https://openalex.org/W2129933858","https://openalex.org/W2131026689","https://openalex.org/W2131271579","https://openalex.org/W2133253129","https://openalex.org/W2133856765","https://openalex.org/W2134023754","https://openalex.org/W2136145671","https://openalex.org/W2137759177","https://openalex.org/W2139306346","https://openalex.org/W2139993758","https://openalex.org/W2140729960","https://openalex.org/W2141458291","https://openalex.org/W2141885858","https://openalex.org/W2142678478","https://openalex.org/W2143485490","https://openalex.org/W2155628349","https://openalex.org/W2156125289","https://openalex.org/W2156841387","https://openalex.org/W2157107905","https://openalex.org/W2157539385","https://openalex.org/W2160177274","https://openalex.org/W2161546116","https://openalex.org/W2166265186","https://openalex.org/W2169456326","https://openalex.org/W2170551349","https://openalex.org/W2175526948","https://openalex.org/W2179438025","https://openalex.org/W2190655222","https://openalex.org/W2206071891","https://openalex.org/W2305300412","https://openalex.org/W2323326409","https://openalex.org/W2337747100","https://openalex.org/W2393535458","https://openalex.org/W2401562335","https://openalex.org/W2508929473","https://openalex.org/W2519890620","https://openalex.org/W2521644033","https://openalex.org/W2528334187","https://openalex.org/W2530896378","https://openalex.org/W2559100382","https://openalex.org/W2562388580","https://openalex.org/W2599417231","https://openalex.org/W2612505479","https://openalex.org/W2623492145","https://openalex.org/W2626316678","https://openalex.org/W2732139758","https://openalex.org/W2756958651","https://openalex.org/W2766330607","https://openalex.org/W2766358903","https://openalex.org/W2766822634","https://openalex.org/W2771381340","https://openalex.org/W2777544090","https://openalex.org/W2789314560","https://openalex.org/W2905576637","https://openalex.org/W2950150251","https://openalex.org/W2950354111","https://openalex.org/W2951160681","https://openalex.org/W3113043731","https://openalex.org/W4210400672","https://openalex.org/W4247053599","https://openalex.org/W6730819202","https://openalex.org/W6739322275"],"related_works":["https://openalex.org/W1222064643","https://openalex.org/W1543301402","https://openalex.org/W1604004112","https://openalex.org/W3023731925","https://openalex.org/W2786547608","https://openalex.org/W2086098522","https://openalex.org/W2950883119","https://openalex.org/W4283818647","https://openalex.org/W4385414771","https://openalex.org/W8235432"],"abstract_inverted_index":{"Meta-omics":[0],"approaches":[1],"have":[2],"been":[3,154],"increasingly":[4],"used":[5],"to":[6,25,182],"study":[7],"the":[8,13,59,72,126,162,188],"structure":[9],"and":[10,31,44,74,82,92,103,115,136,157,164,179],"function":[11],"of":[12,18,52,58,62,65,79,101,128,167,190],"microbial":[14],"communities.":[15],"A":[16],"variety":[17],"large-scale":[19],"collaborative":[20,185],"projects":[21],"are":[22],"being":[23],"conducted":[24],"encompass":[26],"samples":[27],"from":[28,98,161],"diverse":[29],"environments":[30],"habitats.":[32],"This":[33,151,193],"change":[34],"has":[35,153],"resulted":[36],"in":[37,118,187],"enormous":[38],"demands":[39],"for":[40,46,113],"long-term":[41],"data":[42,47,117,133,144,160],"maintenance":[43],"capacity":[45],"analysis.":[48],"The":[49],"Global":[50],"Catalogue":[51],"Metagenomics":[53],"(gcMeta)":[54],"is":[55,125,195],"a":[56,109,119,139,165,177],"part":[57],"'Chinese":[60],"Academy":[61],"Sciences":[63],"Initiative":[64],"Microbiome":[66],"(CAS-CMI)',":[67],"which":[68,142],"focuses":[69],"on":[70],"studying":[71],"human":[73,102],"environmental":[75,104],"microbiome,":[76],"establishing":[77],"depositories":[78],"samples,":[80,106],"strains":[81],"data,":[83],"as":[84,86],"well":[85],"promoting":[87],"international":[88],"collaboration.":[89],"To":[90],"accommodate":[91],"rationally":[93],"organize":[94],"massive":[95],"datasets":[96],"derived":[97],"several":[99],"thousands":[100],"microbiome":[105],"gcMeta":[107],"features":[108],"database":[110],"management":[111],"system":[112],"archiving":[114],"publishing":[116],"standardized":[120],"way.":[121],"Another":[122],"main":[123],"feature":[124],"integration":[127],"more":[129],"than":[130],"ninety":[131],"web-based":[132],"analysis":[134,145],"tools":[135],"workflows":[137],"through":[138],"Docker":[140],"platform":[141,152,175,194],"enables":[143],"by":[146],"using":[147],"various":[148],"operating":[149],"systems.":[150],"rapidly":[155],"expanding,":[156],"now":[158],"hosts":[159],"CAS-CMI":[163],"number":[166],"other":[168],"ongoing":[169],"research":[170],"projects.":[171],"In":[172],"conclusion,":[173],"this":[174],"presents":[176],"powerful":[178],"user-friendly":[180],"service":[181],"support":[183],"worldwide":[184],"efforts":[186],"field":[189],"meta-omics":[191],"research.":[192],"freely":[196],"accessible":[197],"at":[198],"https://gcmeta.wdcm.org/.":[199]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":25},{"year":2023,"cited_by_count":18},{"year":2022,"cited_by_count":13},{"year":2021,"cited_by_count":28},{"year":2020,"cited_by_count":12},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":1}],"updated_date":"2026-07-02T09:51:11.867554","created_date":"2025-10-10T00:00:00"}
