{"id":"https://openalex.org/W2765910974","doi":"https://doi.org/10.1093/nar/gkx994","title":"TCSBN: a database of tissue and cancer specific biological networks","display_name":"TCSBN: a database of tissue and cancer specific biological networks","publication_year":2017,"publication_date":"2017-10-12","ids":{"openalex":"https://openalex.org/W2765910974","doi":"https://doi.org/10.1093/nar/gkx994","mag":"2765910974","pmid":"https://pubmed.ncbi.nlm.nih.gov/29069445"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkx994","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkx994","pdf_url":"https://academic.oup.com/nar/article-pdf/46/D1/D595/23162947/gkx994.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/46/D1/D595/23162947/gkx994.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5081247408","display_name":"Sunjae Lee","orcid":"https://orcid.org/0000-0002-6428-5936"},"institutions":[{"id":"https://openalex.org/I2800139495","display_name":"Science for Life Laboratory","ror":"https://ror.org/04ev03g22","country_code":"SE","type":"facility","lineage":["https://openalex.org/I2800139495"]},{"id":"https://openalex.org/I86987016","display_name":"KTH Royal Institute of Technology","ror":"https://ror.org/026vcq606","country_code":"SE","type":"education","lineage":["https://openalex.org/I86987016"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Sunjae Lee","raw_affiliation_strings":["Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, SE-171 21, Sweden","Science for Life Laboratory, KTH \u2013 Royal Institute of Technology, Stockholm, SE-171 21, Sweden"],"affiliations":[{"raw_affiliation_string":"Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, SE-171 21, Sweden","institution_ids":["https://openalex.org/I86987016","https://openalex.org/I2800139495"]},{"raw_affiliation_string":"Science for Life Laboratory, KTH \u2013 Royal Institute of Technology, Stockholm, SE-171 21, Sweden","institution_ids":["https://openalex.org/I86987016","https://openalex.org/I2800139495"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066830496","display_name":"Cheng Zhang","orcid":"https://orcid.org/0000-0002-3721-8586"},"institutions":[{"id":"https://openalex.org/I86987016","display_name":"KTH Royal Institute of Technology","ror":"https://ror.org/026vcq606","country_code":"SE","type":"education","lineage":["https://openalex.org/I86987016"]},{"id":"https://openalex.org/I2800139495","display_name":"Science for Life Laboratory","ror":"https://ror.org/04ev03g22","country_code":"SE","type":"facility","lineage":["https://openalex.org/I2800139495"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Cheng Zhang","raw_affiliation_strings":["Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, SE-171 21, Sweden","Science for Life Laboratory, KTH \u2013 Royal Institute of Technology, Stockholm, SE-171 21, Sweden"],"affiliations":[{"raw_affiliation_string":"Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, SE-171 21, Sweden","institution_ids":["https://openalex.org/I86987016","https://openalex.org/I2800139495"]},{"raw_affiliation_string":"Science for Life Laboratory, KTH \u2013 Royal Institute of Technology, Stockholm, SE-171 21, Sweden","institution_ids":["https://openalex.org/I86987016","https://openalex.org/I2800139495"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100601273","display_name":"Muhammad Arif","orcid":"https://orcid.org/0000-0003-2261-0881"},"institutions":[{"id":"https://openalex.org/I86987016","display_name":"KTH Royal Institute of Technology","ror":"https://ror.org/026vcq606","country_code":"SE","type":"education","lineage":["https://openalex.org/I86987016"]},{"id":"https://openalex.org/I2800139495","display_name":"Science for Life Laboratory","ror":"https://ror.org/04ev03g22","country_code":"SE","type":"facility","lineage":["https://openalex.org/I2800139495"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Muhammad Arif","raw_affiliation_strings":["Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, SE-171 21, Sweden","Science for Life Laboratory, KTH \u2013 Royal Institute of Technology, Stockholm, SE-171 21, Sweden"],"affiliations":[{"raw_affiliation_string":"Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, SE-171 21, Sweden","institution_ids":["https://openalex.org/I86987016","https://openalex.org/I2800139495"]},{"raw_affiliation_string":"Science for Life Laboratory, KTH \u2013 Royal Institute of Technology, Stockholm, SE-171 21, Sweden","institution_ids":["https://openalex.org/I86987016","https://openalex.org/I2800139495"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101872133","display_name":"Zhengtao Liu","orcid":"https://orcid.org/0000-0002-9596-2477"},"institutions":[{"id":"https://openalex.org/I86987016","display_name":"KTH Royal Institute of Technology","ror":"https://ror.org/026vcq606","country_code":"SE","type":"education","lineage":["https://openalex.org/I86987016"]},{"id":"https://openalex.org/I2800139495","display_name":"Science for Life Laboratory","ror":"https://ror.org/04ev03g22","country_code":"SE","type":"facility","lineage":["https://openalex.org/I2800139495"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Zhengtao Liu","raw_affiliation_strings":["Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, SE-171 21, Sweden","Science for Life Laboratory, KTH \u2013 Royal Institute of Technology, Stockholm, SE-171 21, Sweden"],"affiliations":[{"raw_affiliation_string":"Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, SE-171 21, Sweden","institution_ids":["https://openalex.org/I86987016","https://openalex.org/I2800139495"]},{"raw_affiliation_string":"Science for Life Laboratory, KTH \u2013 Royal Institute of Technology, Stockholm, SE-171 21, Sweden","institution_ids":["https://openalex.org/I86987016","https://openalex.org/I2800139495"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039489405","display_name":"Rui Benfeitas","orcid":"https://orcid.org/0000-0001-7972-0083"},"institutions":[{"id":"https://openalex.org/I2800139495","display_name":"Science for Life Laboratory","ror":"https://ror.org/04ev03g22","country_code":"SE","type":"facility","lineage":["https://openalex.org/I2800139495"]},{"id":"https://openalex.org/I86987016","display_name":"KTH Royal Institute of Technology","ror":"https://ror.org/026vcq606","country_code":"SE","type":"education","lineage":["https://openalex.org/I86987016"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Rui Benfeitas","raw_affiliation_strings":["Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, SE-171 21, Sweden","Science for Life Laboratory, KTH \u2013 Royal Institute of Technology, Stockholm, SE-171 21, Sweden"],"affiliations":[{"raw_affiliation_string":"Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, SE-171 21, Sweden","institution_ids":["https://openalex.org/I86987016","https://openalex.org/I2800139495"]},{"raw_affiliation_string":"Science for Life Laboratory, KTH \u2013 Royal Institute of Technology, Stockholm, SE-171 21, Sweden","institution_ids":["https://openalex.org/I86987016","https://openalex.org/I2800139495"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027005133","display_name":"Gholamreza Bidkhori","orcid":"https://orcid.org/0000-0001-5232-6094"},"institutions":[{"id":"https://openalex.org/I2800139495","display_name":"Science for Life Laboratory","ror":"https://ror.org/04ev03g22","country_code":"SE","type":"facility","lineage":["https://openalex.org/I2800139495"]},{"id":"https://openalex.org/I86987016","display_name":"KTH Royal Institute of Technology","ror":"https://ror.org/026vcq606","country_code":"SE","type":"education","lineage":["https://openalex.org/I86987016"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Gholamreza Bidkhori","raw_affiliation_strings":["Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, SE-171 21, Sweden","Science for Life Laboratory, KTH \u2013 Royal Institute of Technology, Stockholm, SE-171 21, Sweden"],"affiliations":[{"raw_affiliation_string":"Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, SE-171 21, Sweden","institution_ids":["https://openalex.org/I86987016","https://openalex.org/I2800139495"]},{"raw_affiliation_string":"Science for Life Laboratory, KTH \u2013 Royal Institute of Technology, Stockholm, SE-171 21, Sweden","institution_ids":["https://openalex.org/I86987016","https://openalex.org/I2800139495"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013966426","display_name":"Sumit Deshmukh","orcid":null},"institutions":[{"id":"https://openalex.org/I2800139495","display_name":"Science for Life Laboratory","ror":"https://ror.org/04ev03g22","country_code":"SE","type":"facility","lineage":["https://openalex.org/I2800139495"]},{"id":"https://openalex.org/I86987016","display_name":"KTH Royal Institute of Technology","ror":"https://ror.org/026vcq606","country_code":"SE","type":"education","lineage":["https://openalex.org/I86987016"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Sumit Deshmukh","raw_affiliation_strings":["Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, SE-171 21, Sweden","Science for Life Laboratory, KTH \u2013 Royal Institute of Technology, Stockholm, SE-171 21, Sweden"],"affiliations":[{"raw_affiliation_string":"Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, SE-171 21, Sweden","institution_ids":["https://openalex.org/I86987016","https://openalex.org/I2800139495"]},{"raw_affiliation_string":"Science for Life Laboratory, KTH \u2013 Royal Institute of Technology, Stockholm, SE-171 21, Sweden","institution_ids":["https://openalex.org/I86987016","https://openalex.org/I2800139495"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5097466489","display_name":"Mohamed Al Shobky","orcid":null},"institutions":[{"id":"https://openalex.org/I86987016","display_name":"KTH Royal Institute of Technology","ror":"https://ror.org/026vcq606","country_code":"SE","type":"education","lineage":["https://openalex.org/I86987016"]},{"id":"https://openalex.org/I2800139495","display_name":"Science for Life Laboratory","ror":"https://ror.org/04ev03g22","country_code":"SE","type":"facility","lineage":["https://openalex.org/I2800139495"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Mohamed Al\u00a0Shobky","raw_affiliation_strings":["Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, SE-171 21, Sweden","Science for Life Laboratory, KTH \u2013 Royal Institute of Technology, Stockholm, SE-171 21, Sweden"],"affiliations":[{"raw_affiliation_string":"Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, SE-171 21, Sweden","institution_ids":["https://openalex.org/I86987016","https://openalex.org/I2800139495"]},{"raw_affiliation_string":"Science for Life Laboratory, KTH \u2013 Royal Institute of Technology, Stockholm, SE-171 21, Sweden","institution_ids":["https://openalex.org/I86987016","https://openalex.org/I2800139495"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057158798","display_name":"Alen Lovri\u0107","orcid":"https://orcid.org/0000-0001-5778-9928"},"institutions":[{"id":"https://openalex.org/I2800139495","display_name":"Science for Life Laboratory","ror":"https://ror.org/04ev03g22","country_code":"SE","type":"facility","lineage":["https://openalex.org/I2800139495"]},{"id":"https://openalex.org/I86987016","display_name":"KTH Royal Institute of Technology","ror":"https://ror.org/026vcq606","country_code":"SE","type":"education","lineage":["https://openalex.org/I86987016"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Alen Lovric","raw_affiliation_strings":["Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, SE-171 21, Sweden","Science for Life Laboratory, KTH \u2013 Royal Institute of Technology, Stockholm, SE-171 21, Sweden"],"affiliations":[{"raw_affiliation_string":"Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, SE-171 21, Sweden","institution_ids":["https://openalex.org/I86987016","https://openalex.org/I2800139495"]},{"raw_affiliation_string":"Science for Life Laboratory, KTH \u2013 Royal Institute of Technology, Stockholm, SE-171 21, Sweden","institution_ids":["https://openalex.org/I86987016","https://openalex.org/I2800139495"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046743882","display_name":"Jan Bor\u00e9n","orcid":"https://orcid.org/0000-0003-0786-8091"},"institutions":[{"id":"https://openalex.org/I2801112325","display_name":"Sahlgrenska University Hospital","ror":"https://ror.org/04vgqjj36","country_code":"SE","type":"funder","lineage":["https://openalex.org/I2801112325"]},{"id":"https://openalex.org/I881427289","display_name":"University of Gothenburg","ror":"https://ror.org/01tm6cn81","country_code":"SE","type":"education","lineage":["https://openalex.org/I881427289"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Jan Boren","raw_affiliation_strings":["Department of Molecular and Clinical Medicine, University of Gothenburg and Sahlgrenska University Hospital, Gothenburg, SE-413 45, Sweden"],"affiliations":[{"raw_affiliation_string":"Department of Molecular and Clinical Medicine, University of Gothenburg and Sahlgrenska University Hospital, Gothenburg, SE-413 45, Sweden","institution_ids":["https://openalex.org/I2801112325","https://openalex.org/I881427289"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083238115","display_name":"Jens Nielsen","orcid":"https://orcid.org/0000-0002-9955-6003"},"institutions":[{"id":"https://openalex.org/I2800139495","display_name":"Science for Life Laboratory","ror":"https://ror.org/04ev03g22","country_code":"SE","type":"facility","lineage":["https://openalex.org/I2800139495"]},{"id":"https://openalex.org/I66862912","display_name":"Chalmers University of Technology","ror":"https://ror.org/040wg7k59","country_code":"SE","type":"education","lineage":["https://openalex.org/I66862912"]},{"id":"https://openalex.org/I86987016","display_name":"KTH Royal Institute of Technology","ror":"https://ror.org/026vcq606","country_code":"SE","type":"education","lineage":["https://openalex.org/I86987016"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Jens Nielsen","raw_affiliation_strings":["Department of Biology and Biological Engineering, Chalmers University of Technology, Gothenburg, SE-412 96, Sweden","Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, SE-171 21, Sweden","Science for Life Laboratory, KTH \u2013 Royal Institute of Technology, Stockholm, SE-171 21, Sweden"],"affiliations":[{"raw_affiliation_string":"Department of Biology and Biological Engineering, Chalmers University of Technology, Gothenburg, SE-412 96, Sweden","institution_ids":["https://openalex.org/I66862912"]},{"raw_affiliation_string":"Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, SE-171 21, Sweden","institution_ids":["https://openalex.org/I86987016","https://openalex.org/I2800139495"]},{"raw_affiliation_string":"Science for Life Laboratory, KTH \u2013 Royal Institute of Technology, Stockholm, SE-171 21, Sweden","institution_ids":["https://openalex.org/I86987016","https://openalex.org/I2800139495"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060241561","display_name":"Mathias Uhl\u00e9n","orcid":"https://orcid.org/0000-0002-4858-8056"},"institutions":[{"id":"https://openalex.org/I2800139495","display_name":"Science for Life Laboratory","ror":"https://ror.org/04ev03g22","country_code":"SE","type":"facility","lineage":["https://openalex.org/I2800139495"]},{"id":"https://openalex.org/I86987016","display_name":"KTH Royal Institute of Technology","ror":"https://ror.org/026vcq606","country_code":"SE","type":"education","lineage":["https://openalex.org/I86987016"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Mathias Uhlen","raw_affiliation_strings":["Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, SE-171 21, Sweden","Science for Life Laboratory, KTH \u2013 Royal Institute of Technology, Stockholm, SE-171 21, Sweden"],"affiliations":[{"raw_affiliation_string":"Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, SE-171 21, Sweden","institution_ids":["https://openalex.org/I86987016","https://openalex.org/I2800139495"]},{"raw_affiliation_string":"Science for Life Laboratory, KTH \u2013 Royal Institute of Technology, Stockholm, SE-171 21, Sweden","institution_ids":["https://openalex.org/I86987016","https://openalex.org/I2800139495"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5033316206","display_name":"Adil Mardino\u011flu","orcid":"https://orcid.org/0000-0002-4254-6090"},"institutions":[{"id":"https://openalex.org/I2800139495","display_name":"Science for Life Laboratory","ror":"https://ror.org/04ev03g22","country_code":"SE","type":"facility","lineage":["https://openalex.org/I2800139495"]},{"id":"https://openalex.org/I66862912","display_name":"Chalmers University of Technology","ror":"https://ror.org/040wg7k59","country_code":"SE","type":"education","lineage":["https://openalex.org/I66862912"]},{"id":"https://openalex.org/I86987016","display_name":"KTH Royal Institute of Technology","ror":"https://ror.org/026vcq606","country_code":"SE","type":"education","lineage":["https://openalex.org/I86987016"]}],"countries":["SE"],"is_corresponding":true,"raw_author_name":"Adil Mardinoglu","raw_affiliation_strings":["Department of Biology and Biological Engineering, Chalmers University of Technology, Gothenburg, SE-412 96, Sweden","Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, SE-171 21, Sweden","Science for Life Laboratory, KTH \u2013 Royal Institute of Technology, Stockholm, SE-171 21, Sweden"],"affiliations":[{"raw_affiliation_string":"Department of Biology and Biological Engineering, Chalmers University of Technology, Gothenburg, SE-412 96, Sweden","institution_ids":["https://openalex.org/I66862912"]},{"raw_affiliation_string":"Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, SE-171 21, Sweden","institution_ids":["https://openalex.org/I86987016","https://openalex.org/I2800139495"]},{"raw_affiliation_string":"Science for Life Laboratory, KTH \u2013 Royal Institute of Technology, Stockholm, SE-171 21, Sweden","institution_ids":["https://openalex.org/I86987016","https://openalex.org/I2800139495"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":13,"corresponding_author_ids":["https://openalex.org/A5033316206"],"corresponding_institution_ids":["https://openalex.org/I2800139495","https://openalex.org/I66862912","https://openalex.org/I86987016"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":2417,"currency":"EUR","value_usd":2606},"fwci":2.9095,"has_fulltext":true,"cited_by_count":60,"citation_normalized_percentile":{"value":0.91840135,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":99},"biblio":{"volume":"46","issue":"D1","first_page":"D595","last_page":"D600"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9962999820709229,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8757001161575317},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.7070725560188293},{"id":"https://openalex.org/keywords/biological-network","display_name":"Biological network","score":0.7057832479476929},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.5972840189933777},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.5754417181015015},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.4750523567199707},{"id":"https://openalex.org/keywords/gene-regulatory-network","display_name":"Gene regulatory network","score":0.4702181816101074},{"id":"https://openalex.org/keywords/adipose-tissue","display_name":"Adipose tissue","score":0.44720542430877686},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.4317353367805481},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.4168494939804077},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.41332221031188965},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.3355572819709778},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.22044780850410461},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.20576709508895874},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.09392425417900085}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8757001161575317},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.7070725560188293},{"id":"https://openalex.org/C28225019","wikidata":"https://www.wikidata.org/wiki/Q4915005","display_name":"Biological network","level":2,"score":0.7057832479476929},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.5972840189933777},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.5754417181015015},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.4750523567199707},{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.4702181816101074},{"id":"https://openalex.org/C171089720","wikidata":"https://www.wikidata.org/wiki/Q193583","display_name":"Adipose tissue","level":2,"score":0.44720542430877686},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.4317353367805481},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.4168494939804077},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.41332221031188965},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3355572819709778},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.22044780850410461},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.20576709508895874},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.09392425417900085},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C134018914","wikidata":"https://www.wikidata.org/wiki/Q162606","display_name":"Endocrinology","level":1,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000273","descriptor_name":"Adipose Tissue","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000273","descriptor_name":"Adipose Tissue","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000273","descriptor_name":"Adipose Tissue","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008099","descriptor_name":"Liver","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008099","descriptor_name":"Liver","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008099","descriptor_name":"Liver","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009132","descriptor_name":"Muscles","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009132","descriptor_name":"Muscles","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009132","descriptor_name":"Muscles","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D014018","descriptor_name":"Tissue Distribution","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014018","descriptor_name":"Tissue Distribution","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014018","descriptor_name":"Tissue Distribution","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1093/nar/gkx994","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkx994","pdf_url":"https://academic.oup.com/nar/article-pdf/46/D1/D595/23162947/gkx994.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:29069445","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29069445","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:kclpure.kcl.ac.uk:openaire/d5d0359c-6229-40a6-bafc-fd5568e1b3ea","is_oa":false,"landing_page_url":"https://kclpure.kcl.ac.uk/portal/en/publications/d5d0359c-6229-40a6-bafc-fd5568e1b3ea","pdf_url":null,"source":{"id":"https://openalex.org/S4306400216","display_name":"Research Portal (King's College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I183935753","host_organization_name":"King's College London","host_organization_lineage":["https://openalex.org/I183935753"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lee, S, Zhang, C, Arif, M, Liu, Z, Benfeitas, R, Bidkhori, G, Deshmukh, S, Al Shobky, M, Lovric, A, Boren, J, Nielsen, J, Uhlen, M & Mardinoglu, A 2018, 'TCSBN : a database of tissue and cancer specific biological networks', Nucleic Acids Research, vol. 46, no. D1, pp. D595-D600. https://doi.org/10.1093/nar/gkx994","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:DiVA.org:kth-248672","is_oa":true,"landing_page_url":"http://urn.kb.se/resolve?urn=urn:nbn:se:kth:diva-248672","pdf_url":null,"source":{"id":"https://openalex.org/S4306401559","display_name":"KTH Publication Database DiVA (KTH Royal Institute of Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"pmh:oai:europepmc.org:4668244","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5753183","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:5753183","is_oa":true,"landing_page_url":"http://doi.org/10.1093/nar/gkx994","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:research.chalmers.se:500336","is_oa":false,"landing_page_url":"https://research.chalmers.se/en/publication/500336","pdf_url":null,"source":{"id":"https://openalex.org/S4306402469","display_name":"Chalmers Research (Chalmers University of Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I66862912","host_organization_name":"Chalmers University of Technology","host_organization_lineage":["https://openalex.org/I66862912"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":""}],"best_oa_location":{"id":"doi:10.1093/nar/gkx994","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkx994","pdf_url":"https://academic.oup.com/nar/article-pdf/46/D1/D595/23162947/gkx994.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.5,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320322327","display_name":"Knut och Alice Wallenbergs Stiftelse","ror":"https://ror.org/004hzzk67"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2765910974.pdf","grobid_xml":"https://content.openalex.org/works/W2765910974.grobid-xml"},"referenced_works_count":42,"referenced_works":["https://openalex.org/W1575277508","https://openalex.org/W1976937534","https://openalex.org/W1980568044","https://openalex.org/W1991980854","https://openalex.org/W2012034410","https://openalex.org/W2018838463","https://openalex.org/W2031367929","https://openalex.org/W2034269086","https://openalex.org/W2050879870","https://openalex.org/W2067067772","https://openalex.org/W2067094344","https://openalex.org/W2081375228","https://openalex.org/W2098979213","https://openalex.org/W2099291727","https://openalex.org/W2105657635","https://openalex.org/W2110503722","https://openalex.org/W2117692326","https://openalex.org/W2119000371","https://openalex.org/W2124653577","https://openalex.org/W2130755410","https://openalex.org/W2144589197","https://openalex.org/W2147814423","https://openalex.org/W2153178365","https://openalex.org/W2156476088","https://openalex.org/W2158485828","https://openalex.org/W2162592716","https://openalex.org/W2170564127","https://openalex.org/W2202347610","https://openalex.org/W2213167590","https://openalex.org/W2258549026","https://openalex.org/W2259938310","https://openalex.org/W2295820626","https://openalex.org/W2402257995","https://openalex.org/W2465888413","https://openalex.org/W2592185688","https://openalex.org/W2594573607","https://openalex.org/W2613629789","https://openalex.org/W2735379559","https://openalex.org/W2737510520","https://openalex.org/W2740149173","https://openalex.org/W2749613778","https://openalex.org/W2749689006"],"related_works":["https://openalex.org/W2158714033","https://openalex.org/W4386628104","https://openalex.org/W78967844","https://openalex.org/W3213185671","https://openalex.org/W4206945140","https://openalex.org/W2130939068","https://openalex.org/W3163717165","https://openalex.org/W2114466827","https://openalex.org/W2509687359","https://openalex.org/W2156421048"],"abstract_inverted_index":{"Biological":[0],"networks":[1,21,42,82,121],"provide":[2,92],"new":[3],"opportunities":[4],"for":[5,23,44,124],"understanding":[6],"the":[7,53,68,87,100,110,120,125,135,140],"cellular":[8],"biology":[9],"in":[10,86,109,134,155],"both":[11],"health":[12],"and":[13,26,33,48,66,72,78,104,151],"disease":[14,96],"states.":[15],"We":[16,37],"generated":[17,39],"tissue":[18],"specific":[19],"integrated":[20],"(INs)":[22],"liver,":[24],"muscle":[25],"adipose":[27],"tissues":[28,47],"by":[29,76,98],"integrating":[30],"metabolic,":[31],"regulatory":[32],"protein-protein":[34],"interaction":[35],"networks.":[36],"also":[38],"human":[40,146],"co-expression":[41],"(CNs)":[43],"46":[45],"normal":[46],"17":[49],"cancers":[50],"to":[51,144],"explore":[52],"functional":[54,71],"relationships":[55,62],"between":[56,70],"genes":[57],"as":[58,60],"well":[59],"their":[61],"with":[63,139],"biological":[64,102],"functions,":[65],"investigate":[67],"overlap":[69],"physical":[73],"interactions":[74],"provided":[75],"CNs":[77,152],"INs,":[79],"respectively.":[80],"These":[81,148],"can":[83,106,131],"be":[84,107,132],"employed":[85],"analysis":[88,118],"of":[89,112,119,127,137],"omics":[90],"data,":[91],"detailed":[93],"insight":[94],"into":[95],"mechanisms":[97],"identifying":[99],"key":[101],"components":[103],"eventually":[105],"used":[108,133],"development":[111,136],"efficient":[113],"treatment":[114],"strategies.":[115],"Moreover,":[116],"comparative":[117],"may":[122],"allow":[123],"identification":[126],"tissue-specific":[128],"targets":[129],"that":[130],"drugs":[138],"minimum":[141],"toxic":[142],"effect":[143],"other":[145],"tissues.":[147],"context-specific":[149],"INs":[150],"are":[153],"presented":[154],"an":[156],"interactive":[157],"website":[158],"http://inetmodels.com":[159],"without":[160],"any":[161],"limitation.":[162]},"counts_by_year":[{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":11},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":10},{"year":2020,"cited_by_count":9},{"year":2019,"cited_by_count":11},{"year":2018,"cited_by_count":6}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
