{"id":"https://openalex.org/W2613688952","doi":"https://doi.org/10.1093/nar/gkx412","title":"SODA: prediction of protein solubility from disorder and aggregation propensity","display_name":"SODA: prediction of protein solubility from disorder and aggregation propensity","publication_year":2017,"publication_date":"2017-05-09","ids":{"openalex":"https://openalex.org/W2613688952","doi":"https://doi.org/10.1093/nar/gkx412","mag":"2613688952","pmid":"https://pubmed.ncbi.nlm.nih.gov/28505312"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkx412","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkx412","pdf_url":"https://academic.oup.com/nar/article-pdf/45/W1/W236/18137620/gkx412.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/45/W1/W236/18137620/gkx412.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5056593148","display_name":"Lisanna Paladin","orcid":"https://orcid.org/0000-0003-0011-9397"},"institutions":[{"id":"https://openalex.org/I138689650","display_name":"University of Padua","ror":"https://ror.org/00240q980","country_code":"IT","type":"education","lineage":["https://openalex.org/I138689650"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Lisanna Paladin","raw_affiliation_strings":["Department of Biomedical Sciences, University of Padua, Viale G. Colombo 3, 35121 Padova, Italy"],"affiliations":[{"raw_affiliation_string":"Department of Biomedical Sciences, University of Padua, Viale G. Colombo 3, 35121 Padova, Italy","institution_ids":["https://openalex.org/I138689650"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000882827","display_name":"Damiano Piovesan","orcid":"https://orcid.org/0000-0001-8210-2390"},"institutions":[{"id":"https://openalex.org/I138689650","display_name":"University of Padua","ror":"https://ror.org/00240q980","country_code":"IT","type":"education","lineage":["https://openalex.org/I138689650"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Damiano Piovesan","raw_affiliation_strings":["Department of Biomedical Sciences, University of Padua, Viale G. Colombo 3, 35121 Padova, Italy"],"affiliations":[{"raw_affiliation_string":"Department of Biomedical Sciences, University of Padua, Viale G. Colombo 3, 35121 Padova, Italy","institution_ids":["https://openalex.org/I138689650"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5066560665","display_name":"Silvio C. E. Tosatto","orcid":"https://orcid.org/0000-0003-4525-7793"},"institutions":[{"id":"https://openalex.org/I138689650","display_name":"University of Padua","ror":"https://ror.org/00240q980","country_code":"IT","type":"education","lineage":["https://openalex.org/I138689650"]},{"id":"https://openalex.org/I4210113153","display_name":"Neuroscience Institute","ror":"https://ror.org/0240rwx68","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210113153","https://openalex.org/I4210155236"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Silvio\u00a0C.\u00a0E. Tosatto","raw_affiliation_strings":["CNR Institute of Neuroscience, Viale G. Colombo 3, 35121 Padova, Italy","Department of Biomedical Sciences, University of Padua, Viale G. Colombo 3, 35121 Padova, Italy"],"affiliations":[{"raw_affiliation_string":"CNR Institute of Neuroscience, Viale G. Colombo 3, 35121 Padova, Italy","institution_ids":["https://openalex.org/I4210113153"]},{"raw_affiliation_string":"Department of Biomedical Sciences, University of Padua, Viale G. Colombo 3, 35121 Padova, Italy","institution_ids":["https://openalex.org/I138689650"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5066560665"],"corresponding_institution_ids":["https://openalex.org/I138689650","https://openalex.org/I4210113153"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":1.903,"has_fulltext":true,"cited_by_count":68,"citation_normalized_percentile":{"value":0.85983561,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":97,"max":100},"biblio":{"volume":"45","issue":"W1","first_page":"W236","last_page":"W240"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11124","display_name":"Protein purification and stability","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11124","display_name":"Protein purification and stability","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9937000274658203,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/solubility","display_name":"Solubility","score":0.8819875717163086},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5552498698234558},{"id":"https://openalex.org/keywords/protein-aggregation","display_name":"Protein aggregation","score":0.44824182987213135},{"id":"https://openalex.org/keywords/protein-sequencing","display_name":"Protein sequencing","score":0.4432772696018219},{"id":"https://openalex.org/keywords/aggregate","display_name":"Aggregate (composite)","score":0.41890212893486023},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3794650733470917},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.32713133096694946},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.28350546956062317},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.2579623758792877},{"id":"https://openalex.org/keywords/materials-science","display_name":"Materials science","score":0.20348379015922546},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.14435946941375732},{"id":"https://openalex.org/keywords/nanotechnology","display_name":"Nanotechnology","score":0.1405217945575714},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.07997405529022217}],"concepts":[{"id":"https://openalex.org/C155574463","wikidata":"https://www.wikidata.org/wiki/Q170731","display_name":"Solubility","level":2,"score":0.8819875717163086},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5552498698234558},{"id":"https://openalex.org/C136238340","wikidata":"https://www.wikidata.org/wiki/Q7251455","display_name":"Protein aggregation","level":2,"score":0.44824182987213135},{"id":"https://openalex.org/C10010492","wikidata":"https://www.wikidata.org/wiki/Q3142557","display_name":"Protein sequencing","level":4,"score":0.4432772696018219},{"id":"https://openalex.org/C4679612","wikidata":"https://www.wikidata.org/wiki/Q866298","display_name":"Aggregate (composite)","level":2,"score":0.41890212893486023},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3794650733470917},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.32713133096694946},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.28350546956062317},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.2579623758792877},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.20348379015922546},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.14435946941375732},{"id":"https://openalex.org/C171250308","wikidata":"https://www.wikidata.org/wiki/Q11468","display_name":"Nanotechnology","level":1,"score":0.1405217945575714},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.07997405529022217},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000906","descriptor_name":"Antibodies","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000906","descriptor_name":"Antibodies","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000906","descriptor_name":"Antibodies","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000906","descriptor_name":"Antibodies","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000906","descriptor_name":"Antibodies","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000906","descriptor_name":"Antibodies","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012995","descriptor_name":"Solubility","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012995","descriptor_name":"Solubility","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012995","descriptor_name":"Solubility","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057927","descriptor_name":"Hydrophobic and Hydrophilic Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057927","descriptor_name":"Hydrophobic and Hydrophilic Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057927","descriptor_name":"Hydrophobic and Hydrophilic Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064267","descriptor_name":"Intrinsically Disordered Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D064267","descriptor_name":"Intrinsically Disordered Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D064267","descriptor_name":"Intrinsically Disordered Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D066329","descriptor_name":"Protein Aggregates","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066329","descriptor_name":"Protein Aggregates","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066329","descriptor_name":"Protein Aggregates","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gkx412","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkx412","pdf_url":"https://academic.oup.com/nar/article-pdf/45/W1/W236/18137620/gkx412.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:28505312","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28505312","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:7059794","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7059794","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"},{"id":"pmh:oai:www.research.unipd.it:11577/3230822","is_oa":false,"landing_page_url":"http://hdl.handle.net/11577/3230822","pdf_url":null,"source":{"id":"https://openalex.org/S4306402547","display_name":"Padua Research Archive (University of Padova)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I138689650","host_organization_name":"University of Padua","host_organization_lineage":["https://openalex.org/I138689650"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/nar/gkx412","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkx412","pdf_url":"https://academic.oup.com/nar/article-pdf/45/W1/W236/18137620/gkx412.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2613688952.pdf","grobid_xml":"https://content.openalex.org/works/W2613688952.grobid-xml"},"referenced_works_count":34,"referenced_works":["https://openalex.org/W1588724272","https://openalex.org/W1968280815","https://openalex.org/W1970577444","https://openalex.org/W1975304761","https://openalex.org/W1977463239","https://openalex.org/W1983728938","https://openalex.org/W1993282040","https://openalex.org/W2017078809","https://openalex.org/W2059277738","https://openalex.org/W2072678801","https://openalex.org/W2076159058","https://openalex.org/W2080057469","https://openalex.org/W2080831965","https://openalex.org/W2095450147","https://openalex.org/W2103083136","https://openalex.org/W2114678438","https://openalex.org/W2126258012","https://openalex.org/W2133061394","https://openalex.org/W2133458779","https://openalex.org/W2133905406","https://openalex.org/W2139762959","https://openalex.org/W2146554687","https://openalex.org/W2148151472","https://openalex.org/W2150329253","https://openalex.org/W2151823004","https://openalex.org/W2156465034","https://openalex.org/W2158824937","https://openalex.org/W2171698890","https://openalex.org/W2175687390","https://openalex.org/W2288875731","https://openalex.org/W2404674474","https://openalex.org/W2585597953","https://openalex.org/W2587402318","https://openalex.org/W6682034404"],"related_works":["https://openalex.org/W2317648605","https://openalex.org/W2883869520","https://openalex.org/W3037516419","https://openalex.org/W2092739821","https://openalex.org/W2620185010","https://openalex.org/W2059197034","https://openalex.org/W3081083637","https://openalex.org/W4287686325","https://openalex.org/W2289037553","https://openalex.org/W2613688952"],"abstract_inverted_index":{"Solubility":[0],"is":[1,13,104,115],"an":[2],"important,":[3],"albeit":[4],"not":[5],"well":[6,65,106],"understood,":[7],"feature":[8],"determining":[9],"protein":[10,18,44,60],"behavior.":[11],"It":[12,80],"of":[14,43,51,58,131],"paramount":[15],"importance":[16],"in":[17,26,30,78,122],"engineering,":[19],"where":[20],"similar":[21],"folded":[22],"proteins":[23],"may":[24],"behave":[25],"very":[27],"different":[28,88],"ways":[29],"solution.":[31],"Here":[32],"we":[33],"present":[34],"SODA,":[35],"a":[36,134],"novel":[37],"method":[38,114],"to":[39,62,75,92,108],"predict":[40,109],"the":[41,52,56,59,128,143],"changes":[42,77],"solubility":[45,140],"based":[46],"on":[47,86,142],"several":[48,139],"physico-chemical":[49],"properties":[50],"protein.":[53],"SODA":[54,99],"uses":[55],"propensity":[57],"sequence":[61],"aggregate":[63],"as":[64,66],"intrinsic":[67],"disorder,":[68],"plus":[69],"hydrophobicity":[70],"and":[71,84,103,152],"secondary":[72],"structure":[73],"preferences":[74],"estimate":[76],"solubility.":[79,112],"has":[81,100],"been":[82],"trained":[83],"benchmarked":[85],"two":[87],"datasets.":[89],"The":[90,113,145],"comparison":[91],"other":[93],"recently":[94],"published":[95],"methods":[96],"shows":[97],"that":[98],"state-of-the-art":[101],"performance":[102],"particularly":[105],"suited":[107],"mutations":[110,121,132],"decreasing":[111],"fast,":[116],"returning":[117],"results":[118],"for":[119,133],"single":[120],"seconds.":[123],"A":[124],"usage":[125],"example":[126],"estimating":[127],"full":[129],"repertoire":[130],"human":[135],"germline":[136],"antibody":[137],"highlights":[138],"hotspots":[141],"surface.":[144],"web":[146],"server,":[147],"complete":[148],"with":[149],"RESTful":[150],"interface":[151],"extensive":[153],"help,":[154],"can":[155],"be":[156],"accessed":[157],"from":[158],"URL:":[159],"http://protein.bio.unipd.it/soda.":[160]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":9},{"year":2024,"cited_by_count":9},{"year":2023,"cited_by_count":10},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":14},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":6},{"year":2018,"cited_by_count":5}],"updated_date":"2026-03-28T08:17:26.163206","created_date":"2025-10-10T00:00:00"}
