{"id":"https://openalex.org/W2531444860","doi":"https://doi.org/10.1093/nar/gkw935","title":"PIECE 2.0: an update for the plant gene structure comparison and evolution database","display_name":"PIECE 2.0: an update for the plant gene structure comparison and evolution database","publication_year":2016,"publication_date":"2016-10-13","ids":{"openalex":"https://openalex.org/W2531444860","doi":"https://doi.org/10.1093/nar/gkw935","mag":"2531444860","pmid":"https://pubmed.ncbi.nlm.nih.gov/27742820"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkw935","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkw935","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/nar/gkw935","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100630722","display_name":"Yi Wang","orcid":"https://orcid.org/0000-0002-4706-8171"},"institutions":[{"id":"https://openalex.org/I4210140558","display_name":"Western Regional Research Center","ror":"https://ror.org/03x7fn667","country_code":"US","type":"government","lineage":["https://openalex.org/I1312222531","https://openalex.org/I1336096307","https://openalex.org/I4210094889","https://openalex.org/I4210140558"]},{"id":"https://openalex.org/I4210144282","display_name":"Plant Gene Expression Center","ror":"https://ror.org/03rafms67","country_code":"US","type":"government","lineage":["https://openalex.org/I1312222531","https://openalex.org/I1336096307","https://openalex.org/I4210094889","https://openalex.org/I4210144282","https://openalex.org/I95457486"]},{"id":"https://openalex.org/I95457486","display_name":"University of California, Berkeley","ror":"https://ror.org/01an7q238","country_code":"US","type":"education","lineage":["https://openalex.org/I95457486"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yi Wang","raw_affiliation_strings":["Department of Plant and Microbial Biology, University of California Berkeley, Berkeley, CA, USA","USDA-ARS, Plant Gene Expression Center, Albany, CA 94710, USA","USDA-ARS, Western Regional Research Center, Crop Improvement and Genetics Research Unit, Albany, CA 94710, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Plant and Microbial Biology, University of California Berkeley, Berkeley, CA, USA","institution_ids":["https://openalex.org/I95457486"]},{"raw_affiliation_string":"USDA-ARS, Plant Gene Expression Center, Albany, CA 94710, USA","institution_ids":["https://openalex.org/I4210144282"]},{"raw_affiliation_string":"USDA-ARS, Western Regional Research Center, Crop Improvement and Genetics Research Unit, Albany, CA 94710, USA","institution_ids":["https://openalex.org/I4210140558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087391805","display_name":"Ling Xu","orcid":"https://orcid.org/0000-0001-7974-3541"},"institutions":[{"id":"https://openalex.org/I4210144282","display_name":"Plant Gene Expression Center","ror":"https://ror.org/03rafms67","country_code":"US","type":"government","lineage":["https://openalex.org/I1312222531","https://openalex.org/I1336096307","https://openalex.org/I4210094889","https://openalex.org/I4210144282","https://openalex.org/I95457486"]},{"id":"https://openalex.org/I95457486","display_name":"University of California, Berkeley","ror":"https://ror.org/01an7q238","country_code":"US","type":"education","lineage":["https://openalex.org/I95457486"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ling Xu","raw_affiliation_strings":["Department of Plant and Microbial Biology, University of California Berkeley, Berkeley, CA, USA","USDA-ARS, Plant Gene Expression Center, Albany, CA 94710, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Plant and Microbial Biology, University of California Berkeley, Berkeley, CA, USA","institution_ids":["https://openalex.org/I95457486"]},{"raw_affiliation_string":"USDA-ARS, Plant Gene Expression Center, Albany, CA 94710, USA","institution_ids":["https://openalex.org/I4210144282"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083234023","display_name":"Roger Thilmony","orcid":"https://orcid.org/0000-0002-6591-6699"},"institutions":[{"id":"https://openalex.org/I4210140558","display_name":"Western Regional Research Center","ror":"https://ror.org/03x7fn667","country_code":"US","type":"government","lineage":["https://openalex.org/I1312222531","https://openalex.org/I1336096307","https://openalex.org/I4210094889","https://openalex.org/I4210140558"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Roger Thilmony","raw_affiliation_strings":["USDA-ARS, Western Regional Research Center, Crop Improvement and Genetics Research Unit, Albany, CA 94710, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"USDA-ARS, Western Regional Research Center, Crop Improvement and Genetics Research Unit, Albany, CA 94710, USA","institution_ids":["https://openalex.org/I4210140558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004622452","display_name":"Frank M. You","orcid":"https://orcid.org/0000-0003-4424-6179"},"institutions":[{"id":"https://openalex.org/I1331897569","display_name":"Agriculture and Agri-Food Canada","ror":"https://ror.org/051dzs374","country_code":"CA","type":"government","lineage":["https://openalex.org/I1331897569","https://openalex.org/I2802286613"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Frank M. You","raw_affiliation_strings":["Cereal Research Centre, Agriculture and Agri-Food Canada, Morden R6M 1Y5 MB, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Cereal Research Centre, Agriculture and Agri-Food Canada, Morden R6M 1Y5 MB, Canada","institution_ids":["https://openalex.org/I1331897569"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029670569","display_name":"Yong Gu","orcid":"https://orcid.org/0000-0002-2575-4744"},"institutions":[{"id":"https://openalex.org/I1312222531","display_name":"Agricultural Research Service","ror":"https://ror.org/02d2m2044","country_code":"US","type":"government","lineage":["https://openalex.org/I1312222531","https://openalex.org/I1336096307"]},{"id":"https://openalex.org/I4210140558","display_name":"Western Regional Research Center","ror":"https://ror.org/03x7fn667","country_code":"US","type":"government","lineage":["https://openalex.org/I1312222531","https://openalex.org/I1336096307","https://openalex.org/I4210094889","https://openalex.org/I4210140558"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Yong Q. Gu","raw_affiliation_strings":["USDA-ARS, Western Regional Research Center, Crop Improvement and Genetics Research Unit, Albany, CA 94710, USA yong.gu@ars.usda.gov","USDA-ARS, Western Regional Research Center, Crop Improvement and Genetics Research Unit, Albany, CA 94710, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"USDA-ARS, Western Regional Research Center, Crop Improvement and Genetics Research Unit, Albany, CA 94710, USA yong.gu@ars.usda.gov","institution_ids":["https://openalex.org/I1312222531","https://openalex.org/I4210140558"]},{"raw_affiliation_string":"USDA-ARS, Western Regional Research Center, Crop Improvement and Genetics Research Unit, Albany, CA 94710, USA","institution_ids":["https://openalex.org/I4210140558"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5086508860","display_name":"Devin Coleman\u2010Derr","orcid":"https://orcid.org/0000-0002-6282-1731"},"institutions":[{"id":"https://openalex.org/I4210144282","display_name":"Plant Gene Expression Center","ror":"https://ror.org/03rafms67","country_code":"US","type":"government","lineage":["https://openalex.org/I1312222531","https://openalex.org/I1336096307","https://openalex.org/I4210094889","https://openalex.org/I4210144282","https://openalex.org/I95457486"]},{"id":"https://openalex.org/I95457486","display_name":"University of California, Berkeley","ror":"https://ror.org/01an7q238","country_code":"US","type":"education","lineage":["https://openalex.org/I95457486"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Devin Coleman-Derr","raw_affiliation_strings":["Department of Plant and Microbial Biology, University of California Berkeley, Berkeley, CA, USA devin.coleman-derr@ars.usda.gov","USDA-ARS, Plant Gene Expression Center, Albany, CA 94710, USA","Department of Plant and Microbial Biology, University of California Berkeley, Berkeley, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Plant and Microbial Biology, University of California Berkeley, Berkeley, CA, USA devin.coleman-derr@ars.usda.gov","institution_ids":["https://openalex.org/I95457486"]},{"raw_affiliation_string":"USDA-ARS, Plant Gene Expression Center, Albany, CA 94710, USA","institution_ids":["https://openalex.org/I4210144282"]},{"raw_affiliation_string":"Department of Plant and Microbial Biology, University of California Berkeley, Berkeley, CA, USA","institution_ids":["https://openalex.org/I95457486"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5029670569","https://openalex.org/A5086508860"],"corresponding_institution_ids":["https://openalex.org/I1312222531","https://openalex.org/I4210140558","https://openalex.org/I4210144282","https://openalex.org/I95457486"],"apc_list":{"value":3992,"currency":"USD","value_usd":3992},"apc_paid":{"value":3992,"currency":"USD","value_usd":3992},"fwci":2.4192,"has_fulltext":false,"cited_by_count":25,"citation_normalized_percentile":{"value":0.89138335,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":93,"max":99},"biblio":{"volume":"45","issue":"D1","first_page":"1015","last_page":"1020"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8347102403640747},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.6956579685211182},{"id":"https://openalex.org/keywords/intron","display_name":"Intron","score":0.6903800964355469},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.6239315271377563},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.6152183413505554},{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.6130347847938538},{"id":"https://openalex.org/keywords/gene-annotation","display_name":"Gene Annotation","score":0.6057033538818359},{"id":"https://openalex.org/keywords/exon","display_name":"Exon","score":0.4992713928222656},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.49185895919799805},{"id":"https://openalex.org/keywords/refseq","display_name":"RefSeq","score":0.4802404046058655},{"id":"https://openalex.org/keywords/gene-family","display_name":"Gene family","score":0.463293194770813},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.41471225023269653},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4126529097557068},{"id":"https://openalex.org/keywords/kegg","display_name":"KEGG","score":0.4108409881591797},{"id":"https://openalex.org/keywords/gene-ontology","display_name":"Gene ontology","score":0.19051805138587952},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.08003243803977966},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.07919219136238098}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8347102403640747},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.6956579685211182},{"id":"https://openalex.org/C94671646","wikidata":"https://www.wikidata.org/wiki/Q207551","display_name":"Intron","level":3,"score":0.6903800964355469},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.6239315271377563},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6152183413505554},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.6130347847938538},{"id":"https://openalex.org/C2908923196","wikidata":"https://www.wikidata.org/wiki/Q5205742","display_name":"Gene Annotation","level":4,"score":0.6057033538818359},{"id":"https://openalex.org/C36823959","wikidata":"https://www.wikidata.org/wiki/Q373027","display_name":"Exon","level":3,"score":0.4992713928222656},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.49185895919799805},{"id":"https://openalex.org/C151810110","wikidata":"https://www.wikidata.org/wiki/Q7307074","display_name":"RefSeq","level":4,"score":0.4802404046058655},{"id":"https://openalex.org/C5911399","wikidata":"https://www.wikidata.org/wiki/Q2278983","display_name":"Gene family","level":4,"score":0.463293194770813},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.41471225023269653},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4126529097557068},{"id":"https://openalex.org/C152724338","wikidata":"https://www.wikidata.org/wiki/Q909442","display_name":"KEGG","level":5,"score":0.4108409881591797},{"id":"https://openalex.org/C2987395477","wikidata":"https://www.wikidata.org/wiki/Q135085","display_name":"Gene ontology","level":4,"score":0.19051805138587952},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.08003243803977966},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.07919219136238098}],"mesh":[{"descriptor_ui":"D005091","descriptor_name":"Exons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005091","descriptor_name":"Exons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005091","descriptor_name":"Exons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007438","descriptor_name":"Introns","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007438","descriptor_name":"Introns","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007438","descriptor_name":"Introns","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017343","descriptor_name":"Genes, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017343","descriptor_name":"Genes, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017343","descriptor_name":"Genes, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057386","descriptor_name":"Search Engine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057386","descriptor_name":"Search Engine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057386","descriptor_name":"Search Engine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gkw935","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkw935","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:27742820","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27742820","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:5210635","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5210635","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"},{"id":"pmh:oai:open-archive.highwire.org:nar:45/D1/1015","is_oa":false,"landing_page_url":"http://nar.oxfordjournals.org/cgi/content/short/45/D1/1015","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"}],"best_oa_location":{"id":"doi:10.1093/nar/gkw935","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkw935","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Life in Land","score":0.550000011920929,"id":"https://metadata.un.org/sdg/15"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":30,"referenced_works":["https://openalex.org/W1164091404","https://openalex.org/W1542178687","https://openalex.org/W1959663127","https://openalex.org/W1966936568","https://openalex.org/W1968212545","https://openalex.org/W2007178799","https://openalex.org/W2012911917","https://openalex.org/W2035543795","https://openalex.org/W2044336462","https://openalex.org/W2053183062","https://openalex.org/W2054846824","https://openalex.org/W2065011731","https://openalex.org/W2076750947","https://openalex.org/W2109579035","https://openalex.org/W2110256992","https://openalex.org/W2113649367","https://openalex.org/W2119205648","https://openalex.org/W2129191038","https://openalex.org/W2134196182","https://openalex.org/W2138022567","https://openalex.org/W2141292707","https://openalex.org/W2141492628","https://openalex.org/W2145876138","https://openalex.org/W2152375430","https://openalex.org/W2158173168","https://openalex.org/W2221341036","https://openalex.org/W2224056471","https://openalex.org/W2233143224","https://openalex.org/W2287520872","https://openalex.org/W2482775850"],"related_works":["https://openalex.org/W4220714503","https://openalex.org/W2116418175","https://openalex.org/W2393602835","https://openalex.org/W4285233331","https://openalex.org/W2110256992","https://openalex.org/W1984964356","https://openalex.org/W2042690128","https://openalex.org/W3118378687","https://openalex.org/W1580478789","https://openalex.org/W4230762195"],"abstract_inverted_index":{"PIECE":[0,20,48,53,58,188],"(Plant":[1],"Intron":[2],"Exon":[3],"Comparison":[4],"and":[5,14,32,125,157,165,181,207],"Evolution)":[6],"is":[7],"a":[8,23,50,88,146,193],"web-accessible":[9],"database":[10,190],"that":[11],"houses":[12],"intron":[13],"exon":[15],"information":[16,135,153],"of":[17,39,102,121,149,183,204],"plant":[18,43,66,198],"genes.":[19],"serves":[21],"as":[22,68],"resource":[24,195],"for":[25,154,196,201],"biologists":[26],"interested":[27],"in":[28,42,73,107,129,142,173],"comparing":[29],"intron-exon":[30],"organization":[31],"provides":[33],"valuable":[34,194],"insights":[35],"into":[36],"the":[37,74,78,100,108,143,174,179,197,202],"evolution":[38],"gene":[40,151,184,205],"structure":[41,101,152,206],"genomes.":[44],"Recently,":[45],"we":[46,81],"updated":[47,187],"to":[49,70,93,117,131,177],"new":[51,85,89],"version,":[52,80],"2.0":[54,59,189],"(http://probes.pw.usda.gov/piece":[55],"or":[56],"http://aegilops.wheat.ucdavis.edu/piece).":[57],"contains":[60],"annotated":[61],"genes":[62,106,138],"from":[63],"49":[64],"sequenced":[65],"species":[67,72,156,162],"compared":[69],"25":[71],"previous":[75],"version.":[76],"In":[77],"current":[79],"also":[82,114],"added":[83],"several":[84],"features:":[86],"(i)":[87],"viewer":[90],"was":[91,163,171],"developed":[92],"show":[94],"phylogenetic":[95,109],"trees":[96],"displayed":[97],"along":[98],"with":[99,160],"individual":[103],"genes;":[104],"(ii)":[105],"tree":[110],"can":[111],"now":[112,140],"be":[113,192],"grouped":[115],"according":[116],"KOG":[118],"(The":[119],"annotation":[120],"Eukaryotic":[122],"Orthologous":[123],"Groups)":[124],"KO":[126],"(KEGG":[127],"Orthology)":[128],"addition":[130],"Pfam":[132],"domains;":[133],"(iii)":[134],"on":[136],"intronless":[137],"are":[139],"included":[141],"database;":[144],"(iv)":[145],"statistical":[147],"summary":[148],"global":[150],"each":[155],"its":[158],"comparison":[159],"other":[161],"added;":[164],"(v)":[166],"an":[167],"improved":[168],"GSDraw":[169],"tool":[170],"implemented":[172],"web":[175],"server":[176],"enhance":[178],"analysis":[180],"display":[182],"structure.":[185],"The":[186],"will":[191],"research":[199],"community":[200],"study":[203],"evolution.":[208]},"counts_by_year":[{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":8},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":2}],"updated_date":"2026-08-26T07:47:46.906454","created_date":"2025-10-10T00:00:00"}
