{"id":"https://openalex.org/W2528685246","doi":"https://doi.org/10.1093/nar/gkw913","title":"GETPrime 2.0: gene- and transcript-specific qPCR primers for 13 species including polymorphisms","display_name":"GETPrime 2.0: gene- and transcript-specific qPCR primers for 13 species including polymorphisms","publication_year":2016,"publication_date":"2016-10-04","ids":{"openalex":"https://openalex.org/W2528685246","doi":"https://doi.org/10.1093/nar/gkw913","mag":"2528685246","pmid":"https://pubmed.ncbi.nlm.nih.gov/28053161"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkw913","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkw913","pdf_url":"https://academic.oup.com/nar/article-pdf/45/D1/D56/8847149/gkw913.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/45/D1/D56/8847149/gkw913.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5087373839","display_name":"Fabrice David","orcid":"https://orcid.org/0000-0001-8539-865X"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"funder","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Fabrice P.A. David","raw_affiliation_strings":["Bioinformatics and Biostatistics Core Facility, School of Life Sciences, Ecole Polytechnique F\u00e9d\u00e9rale de Lausanne (EPFL), CH-1015 Lausanne, Switzerland","Swiss Institute of Bioinformatics, CH-1015 Lausanne, Switzerland"],"affiliations":[{"raw_affiliation_string":"Bioinformatics and Biostatistics Core Facility, School of Life Sciences, Ecole Polytechnique F\u00e9d\u00e9rale de Lausanne (EPFL), CH-1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I5124864"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, CH-1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008872013","display_name":"Jacques Rougemont","orcid":"https://orcid.org/0000-0002-0955-606X"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"funder","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Jacques Rougemont","raw_affiliation_strings":["Bioinformatics and Biostatistics Core Facility, School of Life Sciences, Ecole Polytechnique F\u00e9d\u00e9rale de Lausanne (EPFL), CH-1015 Lausanne, Switzerland bart.deplancke@epfl.ch","Swiss Institute of Bioinformatics, CH-1015 Lausanne, Switzerland","Bioinformatics and Biostatistics Core Facility, School of Life Sciences, Ecole Polytechnique F\u00e9d\u00e9rale de Lausanne (EPFL), CH-1015 Lausanne, Switzerland"],"affiliations":[{"raw_affiliation_string":"Bioinformatics and Biostatistics Core Facility, School of Life Sciences, Ecole Polytechnique F\u00e9d\u00e9rale de Lausanne (EPFL), CH-1015 Lausanne, Switzerland bart.deplancke@epfl.ch","institution_ids":[]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, CH-1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"Bioinformatics and Biostatistics Core Facility, School of Life Sciences, Ecole Polytechnique F\u00e9d\u00e9rale de Lausanne (EPFL), CH-1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I5124864"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5060679000","display_name":"Bart Deplancke","orcid":"https://orcid.org/0000-0001-9935-843X"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"funder","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Bart Deplancke","raw_affiliation_strings":["Laboratory of Systems Biology and Genetics, Institute of Bio-engineering, School of Life Sciences, Ecole Polytechnique F\u00e9d\u00e9rale de Lausanne (EPFL), CH-1015 Lausanne, Switzerland","Swiss Institute of Bioinformatics, CH-1015 Lausanne, Switzerland Jacques.rougemont@epfl.ch","Swiss Institute of Bioinformatics, CH-1015 Lausanne, Switzerland"],"affiliations":[{"raw_affiliation_string":"Laboratory of Systems Biology and Genetics, Institute of Bio-engineering, School of Life Sciences, Ecole Polytechnique F\u00e9d\u00e9rale de Lausanne (EPFL), CH-1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I5124864"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, CH-1015 Lausanne, Switzerland Jacques.rougemont@epfl.ch","institution_ids":[]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, CH-1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5008872013"],"corresponding_institution_ids":["https://openalex.org/I12708293","https://openalex.org/I5124864"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":1.3559,"has_fulltext":true,"cited_by_count":31,"citation_normalized_percentile":{"value":0.8196661,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"45","issue":"D1","first_page":"D56","last_page":"D60"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ensembl","display_name":"Ensembl","score":0.9773498773574829},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.9141921997070312},{"id":"https://openalex.org/keywords/platypus","display_name":"Platypus","score":0.6504568457603455},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.6156318187713623},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.6045494079589844},{"id":"https://openalex.org/keywords/amplicon","display_name":"Amplicon","score":0.5548233389854431},{"id":"https://openalex.org/keywords/primer","display_name":"Primer (cosmetics)","score":0.546366810798645},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5206010341644287},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4857654869556427},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.4333886504173279},{"id":"https://openalex.org/keywords/reference-genome","display_name":"Reference genome","score":0.4213620722293854},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3972013294696808},{"id":"https://openalex.org/keywords/polymerase-chain-reaction","display_name":"Polymerase chain reaction","score":0.266757071018219}],"concepts":[{"id":"https://openalex.org/C141674004","wikidata":"https://www.wikidata.org/wiki/Q1344256","display_name":"Ensembl","level":5,"score":0.9773498773574829},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.9141921997070312},{"id":"https://openalex.org/C2777322942","wikidata":"https://www.wikidata.org/wiki/Q15343","display_name":"Platypus","level":2,"score":0.6504568457603455},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.6156318187713623},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6045494079589844},{"id":"https://openalex.org/C8185291","wikidata":"https://www.wikidata.org/wiki/Q2844457","display_name":"Amplicon","level":4,"score":0.5548233389854431},{"id":"https://openalex.org/C2777563447","wikidata":"https://www.wikidata.org/wiki/Q7243397","display_name":"Primer (cosmetics)","level":2,"score":0.546366810798645},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5206010341644287},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4857654869556427},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.4333886504173279},{"id":"https://openalex.org/C192953774","wikidata":"https://www.wikidata.org/wiki/Q7307127","display_name":"Reference genome","level":4,"score":0.4213620722293854},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3972013294696808},{"id":"https://openalex.org/C49105822","wikidata":"https://www.wikidata.org/wiki/Q176996","display_name":"Polymerase chain reaction","level":3,"score":0.266757071018219},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.0},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C90856448","wikidata":"https://www.wikidata.org/wiki/Q431","display_name":"Zoology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D017931","descriptor_name":"DNA Primers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017931","descriptor_name":"DNA Primers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017931","descriptor_name":"DNA Primers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060888","descriptor_name":"Real-Time Polymerase Chain Reaction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060888","descriptor_name":"Real-Time Polymerase Chain Reaction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060888","descriptor_name":"Real-Time Polymerase Chain Reaction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1093/nar/gkw913","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkw913","pdf_url":"https://academic.oup.com/nar/article-pdf/45/D1/D56/8847149/gkw913.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:28053161","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28053161","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:5210624","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5210624","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"},{"id":"pmh:oai:infoscience.epfl.ch:227547","is_oa":true,"landing_page_url":"http://infoscience.epfl.ch/record/227547","pdf_url":null,"source":{"id":"https://openalex.org/S4306400487","display_name":"Infoscience (Ecole Polytechnique F\u00e9d\u00e9rale de Lausanne)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:open-archive.highwire.org:nar:45/D1/D56","is_oa":false,"landing_page_url":"http://nar.oxfordjournals.org/cgi/content/short/45/D1/D56","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"}],"best_oa_location":{"id":"doi:10.1093/nar/gkw913","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkw913","pdf_url":"https://academic.oup.com/nar/article-pdf/45/D1/D56/8847149/gkw913.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Life below water","id":"https://metadata.un.org/sdg/14","score":0.5799999833106995}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2528685246.pdf","grobid_xml":"https://content.openalex.org/works/W2528685246.grobid-xml"},"referenced_works_count":15,"referenced_works":["https://openalex.org/W1986299293","https://openalex.org/W1993616000","https://openalex.org/W2005501593","https://openalex.org/W2085567058","https://openalex.org/W2093131463","https://openalex.org/W2093513487","https://openalex.org/W2102907886","https://openalex.org/W2104549677","https://openalex.org/W2120724457","https://openalex.org/W2122732537","https://openalex.org/W2128862717","https://openalex.org/W2162733993","https://openalex.org/W2176686025","https://openalex.org/W2481378334","https://openalex.org/W4252232449"],"related_works":["https://openalex.org/W2058252696","https://openalex.org/W3012437308","https://openalex.org/W3104351839","https://openalex.org/W1968101032","https://openalex.org/W2939383865","https://openalex.org/W3017669309","https://openalex.org/W4383818008","https://openalex.org/W2360792334","https://openalex.org/W2405537421","https://openalex.org/W3157132971"],"abstract_inverted_index":{"GETPrime":[0],"(http://bbcftools.epfl.ch/getprime)":[1],"is":[2,175],"a":[3,6,67,121,189],"database":[4,127,138],"with":[5,160],"web":[7],"frontend":[8],"providing":[9],"gene-":[10],"and":[11,25,61,84,101,128,183],"transcript-specific,":[12],"pre-computed":[13],"qPCR":[14],"primer":[15,157],"pairs.":[16],"The":[17],"primers":[18,44,152],"have":[19,45],"been":[20,47,108],"optimized":[21],"for":[22,26,117,158],"genome-wide":[23,55],"specificity":[24,56],"allowing":[27],"the":[28,72,89,94,104,125,130,136,151,161,177],"selective":[29],"amplification":[30],"of":[31,37,71,123,132,135,163,179],"one":[32],"or":[33,171],"several":[34],"splice":[35],"variants":[36],"most":[38],"known":[39,148],"genes.":[40],"To":[41],"ease":[42],"selection,":[43],"also":[46,143],"ranked":[48],"according":[49],"to":[50,110,146,150],"defined":[51],"criteria":[52],"such":[53],"as":[54,120],"(with":[57],"BLAST),":[58],"amplicon":[59],"size,":[60],"isoform":[62],"coverage.":[63],"Here,":[64],"we":[65],"report":[66],"major":[68],"upgrade":[69],"(2.0)":[70],"database:":[73],"eight":[74],"new":[75],"species":[76,185],"(yeast,":[77],"chicken,":[78],"macaque,":[79],"chimpanzee,":[80],"rat,":[81],"platypus,":[82],"pufferfish,":[83],"Anolis":[85],"carolinensis)":[86],"now":[87,187],"complement":[88],"five":[90],"already":[91],"included":[92],"in":[93,139],"previous":[95],"version":[96],"(human,":[97],"mouse,":[98],"zebrafish,":[99],"fly,":[100],"worm).":[102],"Furthermore,":[103],"genomic":[105],"reference":[106],"has":[107,186],"updated":[109],"Ensembl":[111,137,181],"v81":[112],"(while":[113],"keeping":[114],"earlier":[115],"versions":[116],"backward":[118],"compatibility)":[119],"result":[122],"re-designing":[124],"back-end":[126],"automating":[129],"import":[131],"relevant":[133],"sections":[134],"species-independent":[140],"fashion.":[141],"This":[142],"allowed":[144],"us":[145],"map":[147],"polymorphisms":[149],"(on":[153],"average":[154],"three":[155],"per":[156],"human),":[159],"aim":[162],"reducing":[164],"experimental":[165],"error":[166],"when":[167],"targeting":[168],"specific":[169],"strains":[170],"individuals.":[172],"Another":[173],"consequence":[174],"that":[176],"inclusion":[178],"future":[180],"releases":[182],"other":[184],"become":[188],"relatively":[190],"straightforward":[191],"task.":[192]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":1}],"updated_date":"2026-03-10T16:38:18.471706","created_date":"2025-10-10T00:00:00"}
