{"id":"https://openalex.org/W2345657688","doi":"https://doi.org/10.1093/nar/gkw373","title":"KeyPathwayMinerWeb: online multi-omics network enrichment","display_name":"KeyPathwayMinerWeb: online multi-omics network enrichment","publication_year":2016,"publication_date":"2016-05-05","ids":{"openalex":"https://openalex.org/W2345657688","doi":"https://doi.org/10.1093/nar/gkw373","mag":"2345657688","pmid":"https://pubmed.ncbi.nlm.nih.gov/27150809"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkw373","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkw373","pdf_url":"https://academic.oup.com/nar/article-pdf/44/W1/W98/7633783/gkw373.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/44/W1/W98/7633783/gkw373.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5035928806","display_name":"Markus List","orcid":null},"institutions":[{"id":"https://openalex.org/I177969490","display_name":"University of Southern Denmark","ror":"https://ror.org/03yrrjy16","country_code":"DK","type":"education","lineage":["https://openalex.org/I177969490"]},{"id":"https://openalex.org/I4210109712","display_name":"Max Planck Institute for Informatics","ror":"https://ror.org/01w19ak89","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210109712"]},{"id":"https://openalex.org/I4210127817","display_name":"Lundbeck Foundation","ror":"https://ror.org/03hz8wd80","country_code":"DK","type":"other","lineage":["https://openalex.org/I4210127817"]}],"countries":["DE","DK"],"is_corresponding":false,"raw_author_name":"Markus List","raw_affiliation_strings":["Department of Mathematics and Computer Science, University of Southern Denmark, 5230 Odense, Denmark Lundbeckfonden Center of Excellence in Nanomedicine NanoCAN, University of Southern Denmark, 5000 Odense, Denmark Institute of Molecular Medicine, University of Southern Denmark, 5000 Odense, Denmark Institute of Clinical Research, University of Southern Denmark, 5000 Odense, Denmark Max Planck Institute for Informatics, 66123 Saarbr\u00fccken, Germany","Lundbeckfonden Center of Excellence in Nanomedicine NanoCAN, University of Southern Denmark, 5000 Odense, Denmark","Institute of Clinical Research, University of Southern Denmark, 5000 Odense, Denmark","Max Planck Institute for Informatics, 66123 Saarbr\u00fccken, Germany","Department of Mathematics and Computer Science, University of Southern Denmark, 5230 Odense, Denmark","Institute of Molecular Medicine, University of Southern Denmark, 5000 Odense, Denmark"],"raw_orcid":"https://orcid.org/0000-0002-0941-4168","affiliations":[{"raw_affiliation_string":"Department of Mathematics and Computer Science, University of Southern Denmark, 5230 Odense, Denmark Lundbeckfonden Center of Excellence in Nanomedicine NanoCAN, University of Southern Denmark, 5000 Odense, Denmark Institute of Molecular Medicine, University of Southern Denmark, 5000 Odense, Denmark Institute of Clinical Research, University of Southern Denmark, 5000 Odense, Denmark Max Planck Institute for Informatics, 66123 Saarbr\u00fccken, Germany","institution_ids":["https://openalex.org/I177969490"]},{"raw_affiliation_string":"Lundbeckfonden Center of Excellence in Nanomedicine NanoCAN, University of Southern Denmark, 5000 Odense, Denmark","institution_ids":["https://openalex.org/I4210127817","https://openalex.org/I177969490"]},{"raw_affiliation_string":"Institute of Clinical Research, University of Southern Denmark, 5000 Odense, Denmark","institution_ids":["https://openalex.org/I177969490"]},{"raw_affiliation_string":"Max Planck Institute for Informatics, 66123 Saarbr\u00fccken, Germany","institution_ids":["https://openalex.org/I4210109712"]},{"raw_affiliation_string":"Department of Mathematics and Computer Science, University of Southern Denmark, 5230 Odense, Denmark","institution_ids":["https://openalex.org/I177969490"]},{"raw_affiliation_string":"Institute of Molecular Medicine, University of Southern Denmark, 5000 Odense, Denmark","institution_ids":["https://openalex.org/I177969490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084541770","display_name":"Nicol\u00e1s Alcaraz","orcid":"https://orcid.org/0000-0003-0839-8423"},"institutions":[{"id":"https://openalex.org/I177969490","display_name":"University of Southern Denmark","ror":"https://ror.org/03yrrjy16","country_code":"DK","type":"education","lineage":["https://openalex.org/I177969490"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Nicolas Alcaraz","raw_affiliation_strings":["Department of Mathematics and Computer Science, University of Southern Denmark, 5230 Odense, Denmark Institute of Molecular Medicine, University of Southern Denmark, 5000 Odense, Denmark","Institute of Molecular Medicine, University of Southern Denmark, 5000 Odense, Denmark","Department of Mathematics and Computer Science, University of Southern Denmark, 5230 Odense, Denmark"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Mathematics and Computer Science, University of Southern Denmark, 5230 Odense, Denmark Institute of Molecular Medicine, University of Southern Denmark, 5000 Odense, Denmark","institution_ids":["https://openalex.org/I177969490"]},{"raw_affiliation_string":"Institute of Molecular Medicine, University of Southern Denmark, 5000 Odense, Denmark","institution_ids":["https://openalex.org/I177969490"]},{"raw_affiliation_string":"Department of Mathematics and Computer Science, University of Southern Denmark, 5230 Odense, Denmark","institution_ids":["https://openalex.org/I177969490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086697785","display_name":"Martin Dissing-Hansen","orcid":null},"institutions":[{"id":"https://openalex.org/I177969490","display_name":"University of Southern Denmark","ror":"https://ror.org/03yrrjy16","country_code":"DK","type":"education","lineage":["https://openalex.org/I177969490"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Martin Dissing-Hansen","raw_affiliation_strings":["Department of Mathematics and Computer Science, University of Southern Denmark, 5230 Odense, Denmark"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Mathematics and Computer Science, University of Southern Denmark, 5230 Odense, Denmark","institution_ids":["https://openalex.org/I177969490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011720560","display_name":"Henrik J. Ditzel","orcid":"https://orcid.org/0000-0003-3927-5135"},"institutions":[{"id":"https://openalex.org/I177969490","display_name":"University of Southern Denmark","ror":"https://ror.org/03yrrjy16","country_code":"DK","type":"education","lineage":["https://openalex.org/I177969490"]},{"id":"https://openalex.org/I2801498763","display_name":"Odense University Hospital","ror":"https://ror.org/00ey0ed83","country_code":"DK","type":"funder","lineage":["https://openalex.org/I2801498763"]},{"id":"https://openalex.org/I4210127817","display_name":"Lundbeck Foundation","ror":"https://ror.org/03hz8wd80","country_code":"DK","type":"other","lineage":["https://openalex.org/I4210127817"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Henrik J. Ditzel","raw_affiliation_strings":["Lundbeckfonden Center of Excellence in Nanomedicine NanoCAN, University of Southern Denmark, 5000 Odense, Denmark Institute of Molecular Medicine, University of Southern Denmark, 5000 Odense, Denmark Department of Oncology, Odense University Hospital, 5000 Odense, Denmark","Institute of Molecular Medicine, University of Southern Denmark, 5000 Odense, Denmark","Lundbeckfonden Center of Excellence in Nanomedicine NanoCAN, University of Southern Denmark, 5000 Odense, Denmark","Department of Oncology, Odense University Hospital, 5000 Odense, Denmark"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Lundbeckfonden Center of Excellence in Nanomedicine NanoCAN, University of Southern Denmark, 5000 Odense, Denmark Institute of Molecular Medicine, University of Southern Denmark, 5000 Odense, Denmark Department of Oncology, Odense University Hospital, 5000 Odense, Denmark","institution_ids":["https://openalex.org/I177969490"]},{"raw_affiliation_string":"Institute of Molecular Medicine, University of Southern Denmark, 5000 Odense, Denmark","institution_ids":["https://openalex.org/I177969490"]},{"raw_affiliation_string":"Lundbeckfonden Center of Excellence in Nanomedicine NanoCAN, University of Southern Denmark, 5000 Odense, Denmark","institution_ids":["https://openalex.org/I4210127817","https://openalex.org/I177969490"]},{"raw_affiliation_string":"Department of Oncology, Odense University Hospital, 5000 Odense, Denmark","institution_ids":["https://openalex.org/I2801498763"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039907821","display_name":"Jan Mollenhauer","orcid":null},"institutions":[{"id":"https://openalex.org/I177969490","display_name":"University of Southern Denmark","ror":"https://ror.org/03yrrjy16","country_code":"DK","type":"education","lineage":["https://openalex.org/I177969490"]},{"id":"https://openalex.org/I4210127817","display_name":"Lundbeck Foundation","ror":"https://ror.org/03hz8wd80","country_code":"DK","type":"other","lineage":["https://openalex.org/I4210127817"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Jan Mollenhauer","raw_affiliation_strings":["Lundbeckfonden Center of Excellence in Nanomedicine NanoCAN, University of Southern Denmark, 5000 Odense, Denmark Institute of Molecular Medicine, University of Southern Denmark, 5000 Odense, Denmark","Lundbeckfonden Center of Excellence in Nanomedicine NanoCAN, University of Southern Denmark, 5000 Odense, Denmark","Institute of Molecular Medicine, University of Southern Denmark, 5000 Odense, Denmark"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Lundbeckfonden Center of Excellence in Nanomedicine NanoCAN, University of Southern Denmark, 5000 Odense, Denmark Institute of Molecular Medicine, University of Southern Denmark, 5000 Odense, Denmark","institution_ids":["https://openalex.org/I177969490"]},{"raw_affiliation_string":"Lundbeckfonden Center of Excellence in Nanomedicine NanoCAN, University of Southern Denmark, 5000 Odense, Denmark","institution_ids":["https://openalex.org/I4210127817","https://openalex.org/I177969490"]},{"raw_affiliation_string":"Institute of Molecular Medicine, University of Southern Denmark, 5000 Odense, Denmark","institution_ids":["https://openalex.org/I177969490"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5073222532","display_name":"Jan Baumbach","orcid":"https://orcid.org/0000-0002-0282-0462"},"institutions":[{"id":"https://openalex.org/I177969490","display_name":"University of Southern Denmark","ror":"https://ror.org/03yrrjy16","country_code":"DK","type":"education","lineage":["https://openalex.org/I177969490"]},{"id":"https://openalex.org/I4210109712","display_name":"Max Planck Institute for Informatics","ror":"https://ror.org/01w19ak89","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210109712"]}],"countries":["DE","DK"],"is_corresponding":true,"raw_author_name":"Jan Baumbach","raw_affiliation_strings":["Department of Mathematics and Computer Science, University of Southern Denmark, 5230 Odense, Denmark Max Planck Institute for Informatics, 66123 Saarbr\u00fccken, Germany jan.baumbach@imada.sdu.dk","Department of Mathematics and Computer Science, University of Southern Denmark, 5230 Odense, Denmark","Max Planck Institute for Informatics, 66123 Saarbr\u00fccken, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Mathematics and Computer Science, University of Southern Denmark, 5230 Odense, Denmark Max Planck Institute for Informatics, 66123 Saarbr\u00fccken, Germany jan.baumbach@imada.sdu.dk","institution_ids":["https://openalex.org/I177969490"]},{"raw_affiliation_string":"Department of Mathematics and Computer Science, University of Southern Denmark, 5230 Odense, Denmark","institution_ids":["https://openalex.org/I177969490"]},{"raw_affiliation_string":"Max Planck Institute for Informatics, 66123 Saarbr\u00fccken, Germany","institution_ids":["https://openalex.org/I4210109712"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5073222532"],"corresponding_institution_ids":["https://openalex.org/I177969490","https://openalex.org/I4210109712"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":3.134,"has_fulltext":false,"cited_by_count":54,"citation_normalized_percentile":{"value":0.91641211,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":99},"biblio":{"volume":"44","issue":"W1","first_page":"W98","last_page":"W104"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9950000047683716,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.938605546951294},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5580781698226929}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.938605546951294},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5580781698226929}],"mesh":[{"descriptor_ui":"D000071058","descriptor_name":"Huntingtin Protein","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000071058","descriptor_name":"Huntingtin Protein","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000071058","descriptor_name":"Huntingtin Protein","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006816","descriptor_name":"Huntington Disease","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D006816","descriptor_name":"Huntington Disease","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D006816","descriptor_name":"Huntington Disease","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D006816","descriptor_name":"Huntington Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006816","descriptor_name":"Huntington Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006816","descriptor_name":"Huntington Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016022","descriptor_name":"Case-Control Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016022","descriptor_name":"Case-Control Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016022","descriptor_name":"Case-Control Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1093/nar/gkw373","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkw373","pdf_url":"https://academic.oup.com/nar/article-pdf/44/W1/W98/7633783/gkw373.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:27150809","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27150809","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:sdu.dk:openaire/225b1ebd-8d01-494c-9cd0-f1cb812c1a21","is_oa":false,"landing_page_url":"https://portal.findresearcher.sdu.dk/da/publications/225b1ebd-8d01-494c-9cd0-f1cb812c1a21","pdf_url":null,"source":{"id":"https://openalex.org/S4306400423","display_name":"University of Southern Denmark Research Portal (University of Southern Denmark)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I177969490","host_organization_name":"University of Southern Denmark","host_organization_lineage":["https://openalex.org/I177969490"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"List, M, Alcaraz, N, Dissing-Hansen, M, Ditzel, H J, Mollenhauer, J & Baumbach, J 2016, 'KeyPathwayMinerWeb : online multi-omics network enrichment', Nucleic Acids Research, vol. 44, no. W1, pp. W98-W104. https://doi.org/10.1093/nar/gkw373","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:escidoc.org:escidoc:2339849","is_oa":false,"landing_page_url":"http://hdl.handle.net/11858/00-001M-0000-002B-42F8-8","pdf_url":null,"source":{"id":"https://openalex.org/S7407052962","display_name":"Max Planck Digital Library","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:europepmc.org:3952901","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4987922","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:open-archive.highwire.org:nar:44/W1/W98","is_oa":false,"landing_page_url":"http://nar.oxfordjournals.org/cgi/content/short/44/W1/W98","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"}],"best_oa_location":{"id":"doi:10.1093/nar/gkw373","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkw373","pdf_url":"https://academic.oup.com/nar/article-pdf/44/W1/W98/7633783/gkw373.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G7593214324","display_name":null,"funder_award_id":"00007292","funder_id":"https://openalex.org/F4320310490","funder_display_name":"Villum Fonden"}],"funders":[{"id":"https://openalex.org/F4320310490","display_name":"Villum Fonden","ror":"https://ror.org/007ww2d15"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2345657688.pdf"},"referenced_works_count":30,"referenced_works":["https://openalex.org/W1535333477","https://openalex.org/W1985213868","https://openalex.org/W1987816069","https://openalex.org/W2000881039","https://openalex.org/W2043764521","https://openalex.org/W2059232554","https://openalex.org/W2088891952","https://openalex.org/W2095319945","https://openalex.org/W2098425296","https://openalex.org/W2104843251","https://openalex.org/W2112811019","https://openalex.org/W2113665677","https://openalex.org/W2118934251","https://openalex.org/W2120842170","https://openalex.org/W2122683221","https://openalex.org/W2122863289","https://openalex.org/W2126608399","https://openalex.org/W2130177842","https://openalex.org/W2131848047","https://openalex.org/W2135197754","https://openalex.org/W2135308963","https://openalex.org/W2147937648","https://openalex.org/W2150420891","https://openalex.org/W2159675211","https://openalex.org/W2160748841","https://openalex.org/W2162434031","https://openalex.org/W2166186613","https://openalex.org/W2169304553","https://openalex.org/W2915975108","https://openalex.org/W4213257593"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2082860237","https://openalex.org/W2119695867","https://openalex.org/W2130076355","https://openalex.org/W1990804418","https://openalex.org/W1993764875","https://openalex.org/W2046158694","https://openalex.org/W2788277189","https://openalex.org/W2013243191","https://openalex.org/W1971568933"],"abstract_inverted_index":{"We":[0],"present":[1],"KeyPathwayMinerWeb,":[2],"the":[3,15,59,72],"first":[4],"online":[5,111],"platform":[6],"for":[7,40,86],"de":[8],"novo":[9],"pathway":[10],"enrichment":[11,116],"analysis":[12],"directly":[13],"in":[14,58],"browser.":[16],"Given":[17],"a":[18,26,47,104,118],"biological":[19],"interaction":[20],"network":[21,115],"(e.g.":[22],"protein-protein":[23],"interactions)":[24],"and":[25,89],"series":[27],"of":[28,50,71,81,91],"molecular":[29,60],"profiles":[30],"derived":[31],"from":[32],"one":[33],"or":[34,52],"multiple":[35],"OMICS":[36],"studies":[37],"(gene":[38],"expression,":[39],"instance),":[41],"KeyPathwayMiner":[42,73],"extracts":[43],"connected":[44],"sub-networks":[45],"containing":[46],"high":[48],"number":[49],"active":[51],"differentially":[53],"regulated":[54],"genes":[55],"(proteins,":[56],"metabolites)":[57],"profiles.":[61],"The":[62],"web":[63,99,119],"interface":[64],"at":[65],"(http://keypathwayminer.compbio.sdu.dk)":[66],"implements":[67],"all":[68],"core":[69],"functionalities":[70],"tool":[74],"set":[75],"such":[76],"as":[77,117],"data":[78],"integration,":[79],"input":[80],"background":[82],"knowledge,":[83],"batch":[84],"runs":[85],"parameter":[87],"optimization":[88],"visualization":[90],"extracted":[92],"pathways.":[93],"In":[94],"addition":[95],"to":[96,113],"an":[97],"intuitive":[98],"interface,":[100],"we":[101],"also":[102],"implemented":[103],"RESTful":[105],"API":[106],"that":[107],"now":[108],"enables":[109],"other":[110],"developers":[112],"integrate":[114],"service":[120],"into":[121],"their":[122],"own":[123],"platforms.":[124]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":10},{"year":2020,"cited_by_count":10},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":6},{"year":2016,"cited_by_count":3}],"updated_date":"2026-06-24T13:16:06.693445","created_date":"2025-10-10T00:00:00"}
