{"id":"https://openalex.org/W2558945705","doi":"https://doi.org/10.1093/nar/gkw1084","title":"YM500v3: a database for small RNA sequencing in human cancer research","display_name":"YM500v3: a database for small RNA sequencing in human cancer research","publication_year":2016,"publication_date":"2016-10-26","ids":{"openalex":"https://openalex.org/W2558945705","doi":"https://doi.org/10.1093/nar/gkw1084","mag":"2558945705","pmid":"https://pubmed.ncbi.nlm.nih.gov/27899625"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkw1084","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkw1084","pdf_url":"https://academic.oup.com/nar/article-pdf/45/D1/D925/8846806/gkw1084.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/45/D1/D925/8846806/gkw1084.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5021101384","display_name":"I\u2010Fang Chung","orcid":"https://orcid.org/0000-0001-7892-7285"},"institutions":[{"id":"https://openalex.org/I148366613","display_name":"National Yang Ming Chiao Tung University","ror":"https://ror.org/00se2k293","country_code":"TW","type":"education","lineage":["https://openalex.org/I148366613"]},{"id":"https://openalex.org/I96323854","display_name":"National Yang Ming Chiao Tung University","ror":null,"country_code":"TW","type":null,"lineage":["https://openalex.org/I96323854"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"I-Fang Chung","raw_affiliation_strings":["Institute of Biomedical Informatics, National Yang-Ming University, Taipei 11221, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Biomedical Informatics, National Yang-Ming University, Taipei 11221, Taiwan","institution_ids":["https://openalex.org/I148366613","https://openalex.org/I96323854"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071002136","display_name":"Shing\u2010Jyh Chang","orcid":"https://orcid.org/0009-0004-1793-2450"},"institutions":[{"id":"https://openalex.org/I2802753785","display_name":"Mackay Memorial Hospital","ror":"https://ror.org/015b6az38","country_code":"TW","type":"healthcare","lineage":["https://openalex.org/I2802753785"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Shing-Jyh Chang","raw_affiliation_strings":["Department of Obstetrics and Gynecology, Hsinchu MacKay Memorial Hospital, Hsinchu City 30071, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Obstetrics and Gynecology, Hsinchu MacKay Memorial Hospital, Hsinchu City 30071, Taiwan","institution_ids":["https://openalex.org/I2802753785"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069450382","display_name":"Chen\u2010Yang Chen","orcid":"https://orcid.org/0000-0001-9568-2152"},"institutions":[{"id":"https://openalex.org/I148366613","display_name":"National Yang Ming Chiao Tung University","ror":"https://ror.org/00se2k293","country_code":"TW","type":"education","lineage":["https://openalex.org/I148366613"]},{"id":"https://openalex.org/I96323854","display_name":"National Yang Ming Chiao Tung University","ror":null,"country_code":"TW","type":null,"lineage":["https://openalex.org/I96323854"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Chen-Yang Chen","raw_affiliation_strings":["Institute of Biomedical Informatics, National Yang-Ming University, Taipei 11221, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Biomedical Informatics, National Yang-Ming University, Taipei 11221, Taiwan","institution_ids":["https://openalex.org/I148366613","https://openalex.org/I96323854"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048965311","display_name":"Shu\u2010Hsuan Liu","orcid":"https://orcid.org/0000-0002-2817-3064"},"institutions":[{"id":"https://openalex.org/I184693016","display_name":"China Medical University","ror":"https://ror.org/00v408z34","country_code":"TW","type":"education","lineage":["https://openalex.org/I184693016"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Shu-Hsuan Liu","raw_affiliation_strings":["Graduate Institute of Biomedical Sciences, China Medical University, Taichung, 40402, Taiwan","Research Center for Tumour Medical Science, China Medical University, Taichung, 40402, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Graduate Institute of Biomedical Sciences, China Medical University, Taichung, 40402, Taiwan","institution_ids":["https://openalex.org/I184693016"]},{"raw_affiliation_string":"Research Center for Tumour Medical Science, China Medical University, Taichung, 40402, Taiwan","institution_ids":["https://openalex.org/I184693016"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039476669","display_name":"Chia\u2010Yang Li","orcid":"https://orcid.org/0000-0001-5689-9850"},"institutions":[{"id":"https://openalex.org/I152743029","display_name":"Kaohsiung Medical University","ror":"https://ror.org/03gk81f96","country_code":"TW","type":"education","lineage":["https://openalex.org/I152743029"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Chia-Yang Li","raw_affiliation_strings":["Center for Infectious Disease and Cancer Research, Kaohsiung Medical University, Kaohsiung 80708, Taiwan","Department of Genome Medicine, College of Medicine, Kaohsiung Medical University, Kaohsiung 80708, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Infectious Disease and Cancer Research, Kaohsiung Medical University, Kaohsiung 80708, Taiwan","institution_ids":["https://openalex.org/I152743029"]},{"raw_affiliation_string":"Department of Genome Medicine, College of Medicine, Kaohsiung Medical University, Kaohsiung 80708, Taiwan","institution_ids":["https://openalex.org/I152743029"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112441755","display_name":"Chia\u2010Hao Chan","orcid":null},"institutions":[{"id":"https://openalex.org/I2802753785","display_name":"Mackay Memorial Hospital","ror":"https://ror.org/015b6az38","country_code":"TW","type":"healthcare","lineage":["https://openalex.org/I2802753785"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Chia-Hao Chan","raw_affiliation_strings":["Department of Obstetrics and Gynecology, Hsinchu MacKay Memorial Hospital, Hsinchu City 30071, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Obstetrics and Gynecology, Hsinchu MacKay Memorial Hospital, Hsinchu City 30071, Taiwan","institution_ids":["https://openalex.org/I2802753785"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114166783","display_name":"Chuan-Chi Shih","orcid":null},"institutions":[{"id":"https://openalex.org/I2802753785","display_name":"Mackay Memorial Hospital","ror":"https://ror.org/015b6az38","country_code":"TW","type":"healthcare","lineage":["https://openalex.org/I2802753785"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Chuan-Chi Shih","raw_affiliation_strings":["Department of Obstetrics and Gynecology, Hsinchu MacKay Memorial Hospital, Hsinchu City 30071, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Obstetrics and Gynecology, Hsinchu MacKay Memorial Hospital, Hsinchu City 30071, Taiwan","institution_ids":["https://openalex.org/I2802753785"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5068185287","display_name":"Wei\u2010Chung Cheng","orcid":"https://orcid.org/0000-0002-1229-4857"},"institutions":[{"id":"https://openalex.org/I184693016","display_name":"China Medical University","ror":"https://ror.org/00v408z34","country_code":"TW","type":"education","lineage":["https://openalex.org/I184693016"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Wei-Chung Cheng","raw_affiliation_strings":["Graduate Institute of Biomedical Sciences, China Medical University, Taichung, 40402, Taiwan cwc0702@gmail.com","Research Center for Tumour Medical Science, China Medical University, Taichung, 40402, Taiwan","Graduate Institute of Biomedical Sciences, China Medical University, Taichung, 40402, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Graduate Institute of Biomedical Sciences, China Medical University, Taichung, 40402, Taiwan cwc0702@gmail.com","institution_ids":["https://openalex.org/I184693016"]},{"raw_affiliation_string":"Research Center for Tumour Medical Science, China Medical University, Taichung, 40402, Taiwan","institution_ids":["https://openalex.org/I184693016"]},{"raw_affiliation_string":"Graduate Institute of Biomedical Sciences, China Medical University, Taichung, 40402, Taiwan","institution_ids":["https://openalex.org/I184693016"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5068185287"],"corresponding_institution_ids":["https://openalex.org/I184693016"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":3.055,"has_fulltext":false,"cited_by_count":58,"citation_normalized_percentile":{"value":0.91075825,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":99},"biblio":{"volume":"45","issue":"D1","first_page":"D925","last_page":"D931"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8942601084709167},{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.7351725101470947},{"id":"https://openalex.org/keywords/small-nucleolar-rna","display_name":"Small nucleolar RNA","score":0.6801236271858215},{"id":"https://openalex.org/keywords/piwi-interacting-rna","display_name":"Piwi-interacting RNA","score":0.6649659872055054},{"id":"https://openalex.org/keywords/small-rna","display_name":"Small RNA","score":0.6330534219741821},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6269100904464722},{"id":"https://openalex.org/keywords/carcinogenesis","display_name":"Carcinogenesis","score":0.5553080439567566},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.5493039488792419},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.5203858613967896},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.48941412568092346},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.48246127367019653},{"id":"https://openalex.org/keywords/rna-seq","display_name":"RNA-Seq","score":0.47245171666145325},{"id":"https://openalex.org/keywords/non-coding-rna","display_name":"Non-coding RNA","score":0.41569942235946655},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.39058345556259155},{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.3687521517276764},{"id":"https://openalex.org/keywords/rna-interference","display_name":"RNA interference","score":0.21427494287490845}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8942601084709167},{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.7351725101470947},{"id":"https://openalex.org/C179255354","wikidata":"https://www.wikidata.org/wiki/Q284416","display_name":"Small nucleolar RNA","level":5,"score":0.6801236271858215},{"id":"https://openalex.org/C147724379","wikidata":"https://www.wikidata.org/wiki/Q2367421","display_name":"Piwi-interacting RNA","level":5,"score":0.6649659872055054},{"id":"https://openalex.org/C2779341050","wikidata":"https://www.wikidata.org/wiki/Q24287527","display_name":"Small RNA","level":4,"score":0.6330534219741821},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6269100904464722},{"id":"https://openalex.org/C555283112","wikidata":"https://www.wikidata.org/wiki/Q1637543","display_name":"Carcinogenesis","level":3,"score":0.5553080439567566},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.5493039488792419},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.5203858613967896},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.48941412568092346},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.48246127367019653},{"id":"https://openalex.org/C107397762","wikidata":"https://www.wikidata.org/wiki/Q2542347","display_name":"RNA-Seq","level":5,"score":0.47245171666145325},{"id":"https://openalex.org/C194993378","wikidata":"https://www.wikidata.org/wiki/Q427087","display_name":"Non-coding RNA","level":4,"score":0.41569942235946655},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.39058345556259155},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.3687521517276764},{"id":"https://openalex.org/C166703698","wikidata":"https://www.wikidata.org/wiki/Q201993","display_name":"RNA interference","level":4,"score":0.21427494287490845}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000401","qualifier_name":"mortality","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000401","qualifier_name":"mortality","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000401","qualifier_name":"mortality","is_major_topic":false},{"descriptor_ui":"D011379","descriptor_name":"Prognosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011379","descriptor_name":"Prognosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011379","descriptor_name":"Prognosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058727","descriptor_name":"RNA, Small Untranslated","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D058727","descriptor_name":"RNA, Small Untranslated","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D058727","descriptor_name":"RNA, Small Untranslated","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gkw1084","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkw1084","pdf_url":"https://academic.oup.com/nar/article-pdf/45/D1/D925/8846806/gkw1084.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:27899625","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27899625","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:5210564","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5210564","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"},{"id":"pmh:oai:open-archive.highwire.org:nar:45/D1/D925","is_oa":false,"landing_page_url":"http://nar.oxfordjournals.org/cgi/content/short/45/D1/D925","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"}],"best_oa_location":{"id":"doi:10.1093/nar/gkw1084","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkw1084","pdf_url":"https://academic.oup.com/nar/article-pdf/45/D1/D925/8846806/gkw1084.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":56,"referenced_works":["https://openalex.org/W798319868","https://openalex.org/W1728081620","https://openalex.org/W1974254202","https://openalex.org/W1978337436","https://openalex.org/W1983200597","https://openalex.org/W1983804343","https://openalex.org/W2007368465","https://openalex.org/W2021599506","https://openalex.org/W2023444929","https://openalex.org/W2023893507","https://openalex.org/W2024571565","https://openalex.org/W2034595398","https://openalex.org/W2041241597","https://openalex.org/W2055101024","https://openalex.org/W2066151767","https://openalex.org/W2068205741","https://openalex.org/W2075995228","https://openalex.org/W2076772609","https://openalex.org/W2077327925","https://openalex.org/W2087921665","https://openalex.org/W2095125813","https://openalex.org/W2099835555","https://openalex.org/W2101613234","https://openalex.org/W2107396506","https://openalex.org/W2112453062","https://openalex.org/W2112618205","https://openalex.org/W2112761984","https://openalex.org/W2113390076","https://openalex.org/W2118100797","https://openalex.org/W2119020629","https://openalex.org/W2120456037","https://openalex.org/W2123250471","https://openalex.org/W2130979840","https://openalex.org/W2133968430","https://openalex.org/W2134809456","https://openalex.org/W2137734450","https://openalex.org/W2148224382","https://openalex.org/W2149785901","https://openalex.org/W2151519667","https://openalex.org/W2152239989","https://openalex.org/W2154085311","https://openalex.org/W2154435261","https://openalex.org/W2155649150","https://openalex.org/W2159793493","https://openalex.org/W2170226759","https://openalex.org/W2171398108","https://openalex.org/W2172932999","https://openalex.org/W2174734928","https://openalex.org/W2179438025","https://openalex.org/W2186949423","https://openalex.org/W2192915867","https://openalex.org/W2233413639","https://openalex.org/W2234938965","https://openalex.org/W2269731877","https://openalex.org/W6666965053","https://openalex.org/W6677903585"],"related_works":["https://openalex.org/W2790152170","https://openalex.org/W1849946000","https://openalex.org/W2156617674","https://openalex.org/W4242611624","https://openalex.org/W2547129954","https://openalex.org/W1970757825","https://openalex.org/W2095206021","https://openalex.org/W2890134923","https://openalex.org/W3144341322","https://openalex.org/W2018458485"],"abstract_inverted_index":{"We":[0,78],"previously":[1],"presented":[2,30],"the":[3,25,69,93,114,137,150],"YM500":[4],"database,":[5],"which":[6],"contains":[7],">8000":[8],"small":[9,43,55,60],"RNA":[10],"sequencing":[11],"(smRNA-seq)":[12],"data":[13,90],"sets":[14,91],"and":[15,59,76,86,104,145,158,172],"integrated":[16],"analysis":[17,116],"results":[18,117,138],"for":[19,129,168],"various":[20],"cancer":[21,120,146,157],"miRNome":[22],"studies.":[23],"In":[24,149],"updated":[26,108],"YM500v3":[27,94],"database":[28],"(http://ngs.ym.edu.tw/ym500/)":[29],"herein,":[31],"we":[32],"not":[33],"only":[34],"focus":[35],"on":[36,40],"miRNAs":[37],"but":[38],"also":[39,80],"other":[41],"functional":[42],"non-coding":[44],"RNAs":[45,50,57,62],"(sncRNAs),":[46],"such":[47],"as":[48],"PIWI-interacting":[49],"(piRNAs),":[51],"tRNA-derived":[52],"fragments":[53],"(tRFs),":[54],"nuclear":[56],"(snRNAs)":[58],"nucleolar":[61],"(snoRNAs).":[63],"There":[64],"is":[65],"growing":[66],"knowledge":[67],"of":[68,71,127,139],"role":[70],"sncRNAs":[72,165],"in":[73,106,118,123],"gene":[74],"regulation":[75],"tumorigenesis.":[77],"have":[79],"incorporated":[81],">10":[82],"000":[83],"cancer-related":[84],"RNA-seq":[85],">3000":[87],"more":[88],"smRNA-seq":[89],"into":[92],"database.":[95],"Furthermore,":[96],"there":[97],"are":[98,161],"two":[99],"main":[100],"new":[101],"sections,":[102],"'Survival'":[103,111],"'Cancer',":[105],"this":[107],"version.":[109],"The":[110,133],"section":[112,135],"provides":[113,136],"survival":[115],"all":[119],"types":[121,160],"or":[122],"a":[124,130],"user-defined":[125],"group":[126],"samples":[128],"specific":[131],"sncRNA.":[132],"'Cancer'":[134],"differential":[140],"expression":[141,154],"analyses,":[142],"miRNA-gene":[143],"interactions":[144],"miRNA-related":[147],"pathways.":[148],"'Expression'":[151],"section,":[152],"sncRNA":[153],"profiles":[155],"across":[156],"sample":[159],"newly":[162],"provided.":[163],"Cancer-related":[164],"hold":[166],"potential":[167],"both":[169],"biotech":[170],"applications":[171],"basic":[173],"research.":[174]},"counts_by_year":[{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":11},{"year":2020,"cited_by_count":8},{"year":2019,"cited_by_count":6},{"year":2018,"cited_by_count":12},{"year":2017,"cited_by_count":5}],"updated_date":"2026-05-19T21:40:30.786675","created_date":"2025-10-10T00:00:00"}
