{"id":"https://openalex.org/W1607976983","doi":"https://doi.org/10.1093/nar/gkv556","title":"DeAnnCNV: a tool for online detection and annotation of copy number variations from whole-exome sequencing data","display_name":"DeAnnCNV: a tool for online detection and annotation of copy number variations from whole-exome sequencing data","publication_year":2015,"publication_date":"2015-05-26","ids":{"openalex":"https://openalex.org/W1607976983","doi":"https://doi.org/10.1093/nar/gkv556","mag":"1607976983","pmid":"https://pubmed.ncbi.nlm.nih.gov/26013811"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkv556","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv556","pdf_url":"https://academic.oup.com/nar/article-pdf/43/W1/W289/17436140/gkv556.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/43/W1/W289/17436140/gkv556.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100719572","display_name":"Yuanwei Zhang","orcid":"https://orcid.org/0000-0002-2814-8061"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210103894","display_name":"Hefei National Center for Physical Sciences at Nanoscale","ror":"https://ror.org/01jeedh73","country_code":"CN","type":"facility","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366","https://openalex.org/I4210103894"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuanwei Zhang","raw_affiliation_strings":["Molecular and Cell Genetics Laboratory, The CAS Key Laboratory of Innate Immunity and Chronic Disease, Hefei National Laboratory for Physical Sciences at Microscale and School of Life Sciences, University of Science and Technology of China, Hefei 230027, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Molecular and Cell Genetics Laboratory, The CAS Key Laboratory of Innate Immunity and Chronic Disease, Hefei National Laboratory for Physical Sciences at Microscale and School of Life Sciences, University of Science and Technology of China, Hefei 230027, China","institution_ids":["https://openalex.org/I4210103894","https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000095054","display_name":"Zhenhua Yu","orcid":"https://orcid.org/0000-0001-6526-6991"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhenhua Yu","raw_affiliation_strings":["School of Information Science and Technology, University of Science and Technology of China, Hefei 230027, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Science and Technology, University of Science and Technology of China, Hefei 230027, China","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057896799","display_name":"Rongjun Ban","orcid":null},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Rongjun Ban","raw_affiliation_strings":["School of Information Science and Technology, University of Science and Technology of China, Hefei 230027, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Science and Technology, University of Science and Technology of China, Hefei 230027, China","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100356964","display_name":"Huan Zhang","orcid":"https://orcid.org/0000-0002-6051-6186"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210103894","display_name":"Hefei National Center for Physical Sciences at Nanoscale","ror":"https://ror.org/01jeedh73","country_code":"CN","type":"facility","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366","https://openalex.org/I4210103894"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Huan Zhang","raw_affiliation_strings":["Molecular and Cell Genetics Laboratory, The CAS Key Laboratory of Innate Immunity and Chronic Disease, Hefei National Laboratory for Physical Sciences at Microscale and School of Life Sciences, University of Science and Technology of China, Hefei 230027, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Molecular and Cell Genetics Laboratory, The CAS Key Laboratory of Innate Immunity and Chronic Disease, Hefei National Laboratory for Physical Sciences at Microscale and School of Life Sciences, University of Science and Technology of China, Hefei 230027, China","institution_ids":["https://openalex.org/I4210103894","https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042634147","display_name":"Furhan Iqbal","orcid":"https://orcid.org/0000-0003-4996-0152"},"institutions":[{"id":"https://openalex.org/I4210103894","display_name":"Hefei National Center for Physical Sciences at Nanoscale","ror":"https://ror.org/01jeedh73","country_code":"CN","type":"facility","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366","https://openalex.org/I4210103894"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Furhan Iqbal","raw_affiliation_strings":["Molecular and Cell Genetics Laboratory, The CAS Key Laboratory of Innate Immunity and Chronic Disease, Hefei National Laboratory for Physical Sciences at Microscale and School of Life Sciences, University of Science and Technology of China, Hefei 230027, China Institute of Pure and Applied Biology, Bahauddin Zakariya University Multan, 60800, Pakistan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Molecular and Cell Genetics Laboratory, The CAS Key Laboratory of Innate Immunity and Chronic Disease, Hefei National Laboratory for Physical Sciences at Microscale and School of Life Sciences, University of Science and Technology of China, Hefei 230027, China Institute of Pure and Applied Biology, Bahauddin Zakariya University Multan, 60800, Pakistan","institution_ids":["https://openalex.org/I4210103894"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066514516","display_name":"Aiwu Zhao","orcid":null},"institutions":[{"id":"https://openalex.org/I2802624667","display_name":"Hefei Institutes of Physical Science","ror":"https://ror.org/046n57345","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I2802624667"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Aiwu Zhao","raw_affiliation_strings":["Hefei Institute of Physical Science, China Academy of Science, Hefei 230027, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hefei Institute of Physical Science, China Academy of Science, Hefei 230027, China","institution_ids":["https://openalex.org/I2802624667"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100359729","display_name":"Ao Li","orcid":"https://orcid.org/0000-0001-9910-8967"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Ao Li","raw_affiliation_strings":["School of Information Science and Technology, University of Science and Technology of China, Hefei 230027, China Research Centers for Biomedical Engineering, University of Science and Technology of China, Hefei 230027, China aoli@ustc.edu.cn"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Science and Technology, University of Science and Technology of China, Hefei 230027, China Research Centers for Biomedical Engineering, University of Science and Technology of China, Hefei 230027, China aoli@ustc.edu.cn","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5005929167","display_name":"Qinghua Shi","orcid":"https://orcid.org/0000-0003-1180-9799"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210103894","display_name":"Hefei National Center for Physical Sciences at Nanoscale","ror":"https://ror.org/01jeedh73","country_code":"CN","type":"facility","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366","https://openalex.org/I4210103894"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qinghua Shi","raw_affiliation_strings":["Molecular and Cell Genetics Laboratory, The CAS Key Laboratory of Innate Immunity and Chronic Disease, Hefei National Laboratory for Physical Sciences at Microscale and School of Life Sciences, University of Science and Technology of China, Hefei 230027, China qshi@ustc.edu.cn"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Molecular and Cell Genetics Laboratory, The CAS Key Laboratory of Innate Immunity and Chronic Disease, Hefei National Laboratory for Physical Sciences at Microscale and School of Life Sciences, University of Science and Technology of China, Hefei 230027, China qshi@ustc.edu.cn","institution_ids":["https://openalex.org/I4210103894","https://openalex.org/I126520041"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5100359729"],"corresponding_institution_ids":["https://openalex.org/I126520041"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":2.4406,"has_fulltext":true,"cited_by_count":32,"citation_normalized_percentile":{"value":0.89166861,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"43","issue":"W1","first_page":"W289","last_page":"W294"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.748879611492157},{"id":"https://openalex.org/keywords/copy-number-variation","display_name":"Copy-number variation","score":0.7321832180023193},{"id":"https://openalex.org/keywords/perl","display_name":"Perl","score":0.641148567199707},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6272985935211182},{"id":"https://openalex.org/keywords/exome-sequencing","display_name":"Exome sequencing","score":0.579226553440094},{"id":"https://openalex.org/keywords/exome","display_name":"Exome","score":0.5536384582519531},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.45807337760925293},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.4466882348060608},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4176669120788574},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.39374876022338867},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3678114414215088},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3054484724998474},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.26729851961135864},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2534082531929016},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.18951097130775452},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.15887099504470825},{"id":"https://openalex.org/keywords/mutation","display_name":"Mutation","score":0.12637799978256226}],"concepts":[{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.748879611492157},{"id":"https://openalex.org/C120821319","wikidata":"https://www.wikidata.org/wiki/Q1501491","display_name":"Copy-number variation","level":4,"score":0.7321832180023193},{"id":"https://openalex.org/C2777002779","wikidata":"https://www.wikidata.org/wiki/Q42478","display_name":"Perl","level":2,"score":0.641148567199707},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6272985935211182},{"id":"https://openalex.org/C16671776","wikidata":"https://www.wikidata.org/wiki/Q5420592","display_name":"Exome sequencing","level":4,"score":0.579226553440094},{"id":"https://openalex.org/C10590036","wikidata":"https://www.wikidata.org/wiki/Q417664","display_name":"Exome","level":5,"score":0.5536384582519531},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.45807337760925293},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.4466882348060608},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4176669120788574},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.39374876022338867},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3678114414215088},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3054484724998474},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.26729851961135864},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2534082531929016},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.18951097130775452},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.15887099504470825},{"id":"https://openalex.org/C501734568","wikidata":"https://www.wikidata.org/wiki/Q42918","display_name":"Mutation","level":3,"score":0.12637799978256226},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007248","descriptor_name":"Infertility, Male","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D007248","descriptor_name":"Infertility, Male","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D007248","descriptor_name":"Infertility, Male","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D007248","descriptor_name":"Infertility, Male","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056915","descriptor_name":"DNA Copy Number Variations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056915","descriptor_name":"DNA Copy Number Variations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056915","descriptor_name":"DNA Copy Number Variations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056915","descriptor_name":"DNA Copy Number Variations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059472","descriptor_name":"Exome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059472","descriptor_name":"Exome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059472","descriptor_name":"Exome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059472","descriptor_name":"Exome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gkv556","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv556","pdf_url":"https://academic.oup.com/nar/article-pdf/43/W1/W289/17436140/gkv556.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:26013811","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26013811","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:europepmc.org:3458185","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4489280","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkv556","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv556","pdf_url":"https://academic.oup.com/nar/article-pdf/43/W1/W289/17436140/gkv556.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2553763086","display_name":null,"funder_award_id":"31301227","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2957323829","display_name":"\u80bf\u7624\u62f7\u8d1d\u6570\u5f02\u5e38\u68c0\u6d4b\u7684\u751f\u7269\u4fe1\u606f\u5b66\u7b97\u6cd5\u7814\u7a76","funder_award_id":"31100955","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3269274803","display_name":null,"funder_award_id":"313111245","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4686599990","display_name":null,"funder_award_id":"2014FXZY003","funder_id":"https://openalex.org/F4320335876","funder_display_name":"Development Foundation of Hefei Center for Physical Science and Technology"},{"id":"https://openalex.org/G4883653568","display_name":null,"funder_award_id":"2014CB943101","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G4973523319","display_name":null,"funder_award_id":"2013CB945502","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G7366810476","display_name":null,"funder_award_id":"2013CB947900","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G8345030757","display_name":null,"funder_award_id":"2012CB944402","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320327617","display_name":"Hefei Center for Physical Science and Technology","ror":null},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null},{"id":"https://openalex.org/F4320335876","display_name":"Development Foundation of Hefei Center for Physical Science and Technology","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1607976983.pdf","grobid_xml":"https://content.openalex.org/works/W1607976983.grobid-xml"},"referenced_works_count":37,"referenced_works":["https://openalex.org/W1967628621","https://openalex.org/W1971321176","https://openalex.org/W1979617384","https://openalex.org/W2003654181","https://openalex.org/W2005129098","https://openalex.org/W2009997078","https://openalex.org/W2012034410","https://openalex.org/W2043764521","https://openalex.org/W2044110911","https://openalex.org/W2049279965","https://openalex.org/W2051315170","https://openalex.org/W2059300459","https://openalex.org/W2060084956","https://openalex.org/W2073062083","https://openalex.org/W2094416405","https://openalex.org/W2095867585","https://openalex.org/W2099361287","https://openalex.org/W2105924489","https://openalex.org/W2107126369","https://openalex.org/W2114034064","https://openalex.org/W2117197109","https://openalex.org/W2120091066","https://openalex.org/W2122040228","https://openalex.org/W2122863289","https://openalex.org/W2127308517","https://openalex.org/W2130687290","https://openalex.org/W2133339454","https://openalex.org/W2133465414","https://openalex.org/W2144222696","https://openalex.org/W2144759168","https://openalex.org/W2149681218","https://openalex.org/W2153065499","https://openalex.org/W2154866190","https://openalex.org/W2159675211","https://openalex.org/W2160344363","https://openalex.org/W2915975108","https://openalex.org/W4230266413"],"related_works":["https://openalex.org/W2093932542","https://openalex.org/W2043256480","https://openalex.org/W4242893802","https://openalex.org/W2106924416","https://openalex.org/W2772505697","https://openalex.org/W3083501552","https://openalex.org/W2400191746","https://openalex.org/W1983406990","https://openalex.org/W2542213537","https://openalex.org/W2484239316"],"abstract_inverted_index":{"With":[0],"the":[1,17,65,73,99,113,124],"decrease":[2],"in":[3,43,94,136],"costs,":[4],"whole-exome":[5],"sequencing":[6],"(WES)":[7],"has":[8],"become":[9],"a":[10],"very":[11],"popular":[12],"and":[13,31,54,97,116,142],"powerful":[14],"tool":[15,82],"for":[16,112,127,149],"identification":[18],"of":[19,56,68],"genetic":[20],"variants":[21],"underlying":[22],"human":[23],"diseases.":[24],"However,":[25],"integrated":[26],"tools":[27],"to":[28,63,119,122,146],"precisely":[29],"detect":[30,92],"systematically":[32],"annotate":[33],"copy":[34],"number":[35],"variations":[36],"(CNVs)":[37],"from":[38,60,76,87],"WES":[39,61,69,77],"data":[40,78],"are":[41],"still":[42],"great":[44],"demand.":[45],"Here,":[46],"we":[47],"present":[48],"an":[49,80],"online":[50,144],"tool,":[51],"DeAnnCNV":[52,90,105],"(Detection":[53],"Annotation":[55],"Copy":[57],"Number":[58],"Variations":[59],"data),":[62],"meet":[64],"current":[66],"demands":[67],"users.":[70],"Upon":[71],"submitting":[72],"file":[74],"generated":[75],"by":[79],"in-house":[81],"that":[83],"can":[84,91],"be":[85],"downloaded":[86],"our":[88],"server,":[89],"CNVs":[93,101,115],"each":[95],"sample":[96],"extract":[98],"shared":[100],"among":[102],"multiple":[103],"samples.":[104],"also":[106],"provides":[107],"additional":[108],"useful":[109],"supporting":[110],"information":[111],"detected":[114],"associated":[117],"genes":[118],"help":[120],"users":[121,148],"find":[123],"potential":[125],"candidates":[126],"further":[128],"experimental":[129],"study.":[130],"The":[131],"web":[132],"server":[133],"is":[134,143],"implemented":[135],"PHP":[137],"+":[138,140],"Perl":[139],"MATLAB":[141],"available":[145],"all":[147],"free":[150],"at":[151],"http://mcg.ustc.edu.cn/db/cnv/.":[152]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":9},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":3}],"updated_date":"2026-06-19T15:47:20.252518","created_date":"2025-10-10T00:00:00"}
