{"id":"https://openalex.org/W1618319500","doi":"https://doi.org/10.1093/nar/gkv512","title":"APPRIS WebServer and WebServices","display_name":"APPRIS WebServer and WebServices","publication_year":2015,"publication_date":"2015-05-18","ids":{"openalex":"https://openalex.org/W1618319500","doi":"https://doi.org/10.1093/nar/gkv512","mag":"1618319500","pmid":"https://pubmed.ncbi.nlm.nih.gov/25990727"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkv512","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv512","pdf_url":"https://academic.oup.com/nar/article-pdf/43/W1/W455/21736549/gkv512.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/43/W1/W455/21736549/gkv512.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100687164","display_name":"Jos\u00e9 Manuel Rodr\u0131\u0301guez","orcid":"https://orcid.org/0000-0002-9948-5073"},"institutions":[{"id":"https://openalex.org/I4210089594","display_name":"Spanish National Cancer Research Centre","ror":"https://ror.org/00bvhmc43","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210089594"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Jose Manuel Rodriguez","raw_affiliation_strings":["Spanish National Bioinformatics Institute (INB), Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain jmrodriguez@cnio.es","Spanish National Bioinformatics Institute (INB), Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain"],"affiliations":[{"raw_affiliation_string":"Spanish National Bioinformatics Institute (INB), Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain jmrodriguez@cnio.es","institution_ids":[]},{"raw_affiliation_string":"Spanish National Bioinformatics Institute (INB), Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain","institution_ids":["https://openalex.org/I4210089594"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050850361","display_name":"\u00c1ngel Carro","orcid":null},"institutions":[{"id":"https://openalex.org/I4210089594","display_name":"Spanish National Cancer Research Centre","ror":"https://ror.org/00bvhmc43","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210089594"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Angel Carro","raw_affiliation_strings":["Bioinformatics Unit, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Unit, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain","institution_ids":["https://openalex.org/I4210089594"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015217651","display_name":"Alfonso Valencia","orcid":"https://orcid.org/0000-0002-8937-6789"},"institutions":[{"id":"https://openalex.org/I4210089594","display_name":"Spanish National Cancer Research Centre","ror":"https://ror.org/00bvhmc43","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210089594"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Alfonso Valencia","raw_affiliation_strings":["Spanish National Bioinformatics Institute (INB), Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain","Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain","Spanish National Bioinformatics Institute (INB), Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain"],"affiliations":[{"raw_affiliation_string":"Spanish National Bioinformatics Institute (INB), Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain","institution_ids":[]},{"raw_affiliation_string":"Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain","institution_ids":["https://openalex.org/I4210089594"]},{"raw_affiliation_string":"Spanish National Bioinformatics Institute (INB), Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain","institution_ids":["https://openalex.org/I4210089594"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5088945131","display_name":"Michael L. Tress","orcid":"https://orcid.org/0000-0001-9046-6370"},"institutions":[{"id":"https://openalex.org/I4210089594","display_name":"Spanish National Cancer Research Centre","ror":"https://ror.org/00bvhmc43","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210089594"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Michael L. Tress","raw_affiliation_strings":["Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain mtress@cnio.es","Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain"],"affiliations":[{"raw_affiliation_string":"Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain mtress@cnio.es","institution_ids":[]},{"raw_affiliation_string":"Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain","institution_ids":["https://openalex.org/I4210089594"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5088945131","https://openalex.org/A5100687164"],"corresponding_institution_ids":["https://openalex.org/I4210089594"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":1.7803,"has_fulltext":false,"cited_by_count":19,"citation_normalized_percentile":{"value":0.84325295,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"43","issue":"W1","first_page":"W455","last_page":"W459"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.74888676404953},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6362103223800659},{"id":"https://openalex.org/keywords/web-service","display_name":"Web service","score":0.5150244235992432},{"id":"https://openalex.org/keywords/server","display_name":"Server","score":0.4918801784515381},{"id":"https://openalex.org/keywords/splice","display_name":"splice","score":0.4194895625114441},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3670121431350708},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3418719172477722},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.2547335922718048},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.2389301359653473},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.22463080286979675},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.19375967979431152},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.08755373954772949}],"concepts":[{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.74888676404953},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6362103223800659},{"id":"https://openalex.org/C35578498","wikidata":"https://www.wikidata.org/wiki/Q193424","display_name":"Web service","level":2,"score":0.5150244235992432},{"id":"https://openalex.org/C93996380","wikidata":"https://www.wikidata.org/wiki/Q44127","display_name":"Server","level":2,"score":0.4918801784515381},{"id":"https://openalex.org/C2780989783","wikidata":"https://www.wikidata.org/wiki/Q7578557","display_name":"splice","level":3,"score":0.4194895625114441},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3670121431350708},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3418719172477722},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.2547335922718048},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.2389301359653473},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.22463080286979675},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.19375967979431152},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.08755373954772949}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002415","descriptor_name":"Cats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002415","descriptor_name":"Cats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002415","descriptor_name":"Cats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002417","descriptor_name":"Cattle","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002417","descriptor_name":"Cattle","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002417","descriptor_name":"Cattle","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004285","descriptor_name":"Dogs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004285","descriptor_name":"Dogs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004285","descriptor_name":"Dogs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017398","descriptor_name":"Alternative Splicing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017398","descriptor_name":"Alternative Splicing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017398","descriptor_name":"Alternative Splicing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gkv512","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv512","pdf_url":"https://academic.oup.com/nar/article-pdf/43/W1/W455/21736549/gkv512.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:25990727","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25990727","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:europepmc.org:3458130","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4489225","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkv512","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv512","pdf_url":"https://academic.oup.com/nar/article-pdf/43/W1/W455/21736549/gkv512.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Life in Land","score":0.6000000238418579,"id":"https://metadata.un.org/sdg/15"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1618319500.pdf","grobid_xml":"https://content.openalex.org/works/W1618319500.grobid-xml"},"referenced_works_count":28,"referenced_works":["https://openalex.org/W24553703","https://openalex.org/W51400419","https://openalex.org/W1971147414","https://openalex.org/W1971363517","https://openalex.org/W2000588380","https://openalex.org/W2011920499","https://openalex.org/W2014061560","https://openalex.org/W2078063499","https://openalex.org/W2089047063","https://openalex.org/W2092170757","https://openalex.org/W2096465161","https://openalex.org/W2100117604","https://openalex.org/W2101466114","https://openalex.org/W2106882534","https://openalex.org/W2118416745","https://openalex.org/W2125946663","https://openalex.org/W2141831115","https://openalex.org/W2147526198","https://openalex.org/W2151139168","https://openalex.org/W2152748513","https://openalex.org/W2155804510","https://openalex.org/W2156052197","https://openalex.org/W2157936723","https://openalex.org/W2158714788","https://openalex.org/W2165064122","https://openalex.org/W2170441710","https://openalex.org/W2323717928","https://openalex.org/W4230266413"],"related_works":["https://openalex.org/W2626999804","https://openalex.org/W4250004941","https://openalex.org/W2137014442","https://openalex.org/W2049015391","https://openalex.org/W1533158771","https://openalex.org/W122082928","https://openalex.org/W2521397622","https://openalex.org/W4294067941","https://openalex.org/W2104288289","https://openalex.org/W2128825190"],"abstract_inverted_index":{"This":[0],"paper":[1],"introduces":[2],"the":[3,11,15,21,46,51,55,62,89,120,133,155,177,180],"APPRIS":[4,22,39,52,56,65,110,129,162,181,184],"WebServer":[5,40,66,130],"(http://appris.bioinfo.cnio.es)":[6],"and":[7,14,41,67,75,78,94,141,148,174,196],"WebServices":[8,42,57,68,163,185],"(http://apprisws.bioinfo.cnio.es).":[9],"Both":[10],"web":[12,16],"servers":[13],"services":[17],"are":[18],"based":[19],"around":[20],"Database,":[23,53],"a":[24,98,143],"database":[25],"that":[26],"presently":[27],"houses":[28],"annotations":[29,90,168,178],"of":[30,61,91,135,145,158],"splice":[31,70,136],"isoforms":[32,71,112,137],"for":[33,102,132,138],"five":[34],"different":[35],"vertebrate":[36],"genomes.":[37],"The":[38,64,128,161,183],"provide":[43],"access":[44],"to":[45,96,116,150,153,166,175,192],"computational":[47],"methods":[48],"implemented":[49,188],"in":[50,125,170,179],"while":[54],"also":[58],"allows":[59,131],"retrieval":[60],"annotations.":[63],"annotate":[69],"with":[72,79,119],"protein":[73,108,122],"structural":[74],"functional":[76],"features,":[77],"data":[80],"from":[81],"cross-species":[82],"alignments.":[83],"In":[84],"addition":[85],"they":[86],"can":[87],"use":[88],"structure,":[92],"function":[93],"conservation":[95],"select":[97],"single":[99],"reference":[100],"isoform":[101,123],"each":[103],"protein-coding":[104],"gene":[105],"(the":[106],"principal":[107,111],"isoform).":[109],"have":[113,186],"been":[114,187],"shown":[115],"agree":[117],"overwhelmingly":[118],"main":[121],"detected":[124],"proteomics":[126],"experiments.":[127],"annotation":[134],"individual":[139],"genes,":[140],"provides":[142],"range":[144],"visual":[146],"representations":[147],"tools":[149],"allow":[151],"researchers":[152],"identify":[154],"likely":[156],"effect":[157],"splicing":[159],"events.":[160],"permit":[164],"users":[165],"generate":[167],"automatically":[169],"high":[171],"throughput":[172],"mode":[173],"interrogate":[176],"Database.":[182],"using":[189],"REST":[190],"architecture":[191],"be":[193],"flexible,":[194],"modular":[195],"automatic.":[197]},"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":2}],"updated_date":"2026-03-10T16:38:18.471706","created_date":"2025-10-10T00:00:00"}
