{"id":"https://openalex.org/W1484660603","doi":"https://doi.org/10.1093/nar/gkv487","title":"OrthoVenn: a web server for genome wide comparison and annotation of orthologous clusters across multiple species","display_name":"OrthoVenn: a web server for genome wide comparison and annotation of orthologous clusters across multiple species","publication_year":2015,"publication_date":"2015-05-11","ids":{"openalex":"https://openalex.org/W1484660603","doi":"https://doi.org/10.1093/nar/gkv487","mag":"1484660603","pmid":"https://pubmed.ncbi.nlm.nih.gov/25964301"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkv487","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv487","pdf_url":"https://academic.oup.com/nar/article-pdf/43/W1/W78/17436004/gkv487.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/43/W1/W78/17436004/gkv487.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100630722","display_name":"Yi Wang","orcid":"https://orcid.org/0000-0002-4706-8171"},"institutions":[{"id":"https://openalex.org/I84218800","display_name":"University of California, Davis","ror":"https://ror.org/05rrcem69","country_code":"US","type":"education","lineage":["https://openalex.org/I84218800"]},{"id":"https://openalex.org/I4210140558","display_name":"Western Regional Research Center","ror":"https://ror.org/03x7fn667","country_code":"US","type":"government","lineage":["https://openalex.org/I1312222531","https://openalex.org/I1336096307","https://openalex.org/I4210094889","https://openalex.org/I4210140558"]},{"id":"https://openalex.org/I158842170","display_name":"Chongqing University","ror":"https://ror.org/023rhb549","country_code":"CN","type":"education","lineage":["https://openalex.org/I158842170"]}],"countries":["CN","US"],"is_corresponding":true,"raw_author_name":"Yi Wang","raw_affiliation_strings":["USDA-ARS, Western Regional Research Center, Crop Improvement and Genetics Research Unit, Albany, CA 94710, USA Department of Plant Sciences, University of California, Davis, CA 95616, USA Bioengineering College, Campus A, Chongqing University, Chongqing 400030, China Yi.Wang@ars.usda.gov","USDA-ARS, Western Regional Research Center, Crop Improvement and Genetics Research Unit, Albany, CA 94710, USA","Department of Plant Sciences, University of California, Davis, CA 95616, USA","Bioengineering College, Campus A, Chongqing University, Chongqing 400030, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"USDA-ARS, Western Regional Research Center, Crop Improvement and Genetics Research Unit, Albany, CA 94710, USA Department of Plant Sciences, University of California, Davis, CA 95616, USA Bioengineering College, Campus A, Chongqing University, Chongqing 400030, China Yi.Wang@ars.usda.gov","institution_ids":[]},{"raw_affiliation_string":"USDA-ARS, Western Regional Research Center, Crop Improvement and Genetics Research Unit, Albany, CA 94710, USA","institution_ids":["https://openalex.org/I4210140558"]},{"raw_affiliation_string":"Department of Plant Sciences, University of California, Davis, CA 95616, USA","institution_ids":["https://openalex.org/I84218800"]},{"raw_affiliation_string":"Bioengineering College, Campus A, Chongqing University, Chongqing 400030, China","institution_ids":["https://openalex.org/I158842170"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086508860","display_name":"Devin Coleman\u2010Derr","orcid":"https://orcid.org/0000-0002-6282-1731"},"institutions":[{"id":"https://openalex.org/I4210144282","display_name":"Plant Gene Expression Center","ror":"https://ror.org/03rafms67","country_code":"US","type":"government","lineage":["https://openalex.org/I1312222531","https://openalex.org/I1336096307","https://openalex.org/I4210094889","https://openalex.org/I4210144282","https://openalex.org/I95457486"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Devin Coleman-Derr","raw_affiliation_strings":["USDA-ARS, Plant Gene Expression Center, Albany, CA 94710, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"USDA-ARS, Plant Gene Expression Center, Albany, CA 94710, USA","institution_ids":["https://openalex.org/I4210144282"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100658925","display_name":"Guoping Chen","orcid":"https://orcid.org/0000-0001-8157-4687"},"institutions":[{"id":"https://openalex.org/I158842170","display_name":"Chongqing University","ror":"https://ror.org/023rhb549","country_code":"CN","type":"education","lineage":["https://openalex.org/I158842170"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Guoping Chen","raw_affiliation_strings":["Bioengineering College, Campus A, Chongqing University, Chongqing 400030, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioengineering College, Campus A, Chongqing University, Chongqing 400030, China","institution_ids":["https://openalex.org/I158842170"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5029670569","display_name":"Yong Gu","orcid":"https://orcid.org/0000-0002-0811-7209"},"institutions":[{"id":"https://openalex.org/I4210140558","display_name":"Western Regional Research Center","ror":"https://ror.org/03x7fn667","country_code":"US","type":"government","lineage":["https://openalex.org/I1312222531","https://openalex.org/I1336096307","https://openalex.org/I4210094889","https://openalex.org/I4210140558"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yong Q. Gu","raw_affiliation_strings":["USDA-ARS, Western Regional Research Center, Crop Improvement and Genetics Research Unit, Albany, CA 94710, USA Yi.Wang@ars.usda.gov","USDA-ARS, Western Regional Research Center, Crop Improvement and Genetics Research Unit, Albany, CA 94710, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"USDA-ARS, Western Regional Research Center, Crop Improvement and Genetics Research Unit, Albany, CA 94710, USA Yi.Wang@ars.usda.gov","institution_ids":[]},{"raw_affiliation_string":"USDA-ARS, Western Regional Research Center, Crop Improvement and Genetics Research Unit, Albany, CA 94710, USA","institution_ids":["https://openalex.org/I4210140558"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5100630722"],"corresponding_institution_ids":["https://openalex.org/I158842170","https://openalex.org/I4210140558","https://openalex.org/I84218800"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":19.4284,"has_fulltext":true,"cited_by_count":930,"citation_normalized_percentile":{"value":0.99588914,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"43","issue":"W1","first_page":"W78","last_page":"W84"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11470","display_name":"Legume Nitrogen Fixing Symbiosis","score":0.9919000267982483,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.9916999936103821,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8486963510513306},{"id":"https://openalex.org/keywords/venn-diagram","display_name":"Venn diagram","score":0.7384456992149353},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.6838282942771912},{"id":"https://openalex.org/keywords/orthologous-gene","display_name":"Orthologous Gene","score":0.615730881690979},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5386962294578552},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.49094370007514954},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.4565155506134033},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.45499807596206665},{"id":"https://openalex.org/keywords/comparative-genomics","display_name":"Comparative genomics","score":0.44105294346809387},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.3826141953468323}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8486963510513306},{"id":"https://openalex.org/C55508974","wikidata":"https://www.wikidata.org/wiki/Q190763","display_name":"Venn diagram","level":2,"score":0.7384456992149353},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6838282942771912},{"id":"https://openalex.org/C2909108991","wikidata":"https://www.wikidata.org/wiki/Q414601","display_name":"Orthologous Gene","level":4,"score":0.615730881690979},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5386962294578552},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.49094370007514954},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.4565155506134033},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.45499807596206665},{"id":"https://openalex.org/C105176652","wikidata":"https://www.wikidata.org/wiki/Q1147112","display_name":"Comparative genomics","level":5,"score":0.44105294346809387},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3826141953468323},{"id":"https://openalex.org/C145420912","wikidata":"https://www.wikidata.org/wiki/Q853077","display_name":"Mathematics education","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005810","descriptor_name":"Multigene Family","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005810","descriptor_name":"Multigene Family","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005810","descriptor_name":"Multigene Family","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/nar/gkv487","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv487","pdf_url":"https://academic.oup.com/nar/article-pdf/43/W1/W78/17436004/gkv487.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:25964301","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25964301","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmid:31053848","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31053848","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:europepmc.org:5577258","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6602458","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:europepmc.org:3458198","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4489293","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkv487","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv487","pdf_url":"https://academic.oup.com/nar/article-pdf/43/W1/W78/17436004/gkv487.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/15","display_name":"Life in Land","score":0.5600000023841858}],"awards":[{"id":"https://openalex.org/G7198241657","display_name":null,"funder_award_id":"IOS 0822100","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G864647273","display_name":"Construction of High Resolution Physical Maps for Large Plant Genomes","funder_award_id":"0822100","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1484660603.pdf","grobid_xml":"https://content.openalex.org/works/W1484660603.grobid-xml"},"referenced_works_count":59,"referenced_works":["https://openalex.org/W1552559843","https://openalex.org/W1578832578","https://openalex.org/W1821514708","https://openalex.org/W1843530575","https://openalex.org/W1890088071","https://openalex.org/W1900937478","https://openalex.org/W1918394768","https://openalex.org/W1965372971","https://openalex.org/W1979835060","https://openalex.org/W1989564302","https://openalex.org/W1997272729","https://openalex.org/W2000708574","https://openalex.org/W2008856488","https://openalex.org/W2012035190","https://openalex.org/W2016681664","https://openalex.org/W2022442996","https://openalex.org/W2023741270","https://openalex.org/W2030530458","https://openalex.org/W2031611770","https://openalex.org/W2032854163","https://openalex.org/W2038740993","https://openalex.org/W2045204781","https://openalex.org/W2052315005","https://openalex.org/W2052426953","https://openalex.org/W2054598634","https://openalex.org/W2061918046","https://openalex.org/W2067786443","https://openalex.org/W2080170974","https://openalex.org/W2092779913","https://openalex.org/W2099321785","https://openalex.org/W2107249189","https://openalex.org/W2109750550","https://openalex.org/W2110345166","https://openalex.org/W2113063072","https://openalex.org/W2114676910","https://openalex.org/W2116054833","https://openalex.org/W2122673596","https://openalex.org/W2122914905","https://openalex.org/W2123172705","https://openalex.org/W2124166542","https://openalex.org/W2124351063","https://openalex.org/W2125119899","https://openalex.org/W2126045294","https://openalex.org/W2132926880","https://openalex.org/W2143485490","https://openalex.org/W2149049580","https://openalex.org/W2154096947","https://openalex.org/W2157009395","https://openalex.org/W2159266221","https://openalex.org/W2161421500","https://openalex.org/W2162528766","https://openalex.org/W2165998553","https://openalex.org/W2167188257","https://openalex.org/W2280625941","https://openalex.org/W2316262244","https://openalex.org/W2559011563","https://openalex.org/W2739999456","https://openalex.org/W3210308821","https://openalex.org/W4230266413"],"related_works":["https://openalex.org/W1493660383","https://openalex.org/W2759519215","https://openalex.org/W4318240630","https://openalex.org/W2353729507","https://openalex.org/W2350466590","https://openalex.org/W1542620732","https://openalex.org/W3031625301","https://openalex.org/W4308713831","https://openalex.org/W4386771068","https://openalex.org/W1968252650"],"abstract_inverted_index":{"Genome":[0],"wide":[1,47],"analysis":[2,120],"of":[3,10,29,51,57,68,75,91,96,105,114,127,137,139],"orthologous":[4,18,52,69,125],"clusters":[5,19,70,97,116,126,138],"is":[6,43,148],"an":[7,149],"important":[8],"component":[9],"comparative":[11],"genomics":[12],"studies.":[13],"Identifying":[14],"the":[15,25,66,92,106,115],"overlap":[16],"among":[17],"can":[20],"enable":[21],"us":[22],"to":[23],"elucidate":[24],"function":[26],"and":[27,49,63,71,88,94,131,151],"evolution":[28],"proteins":[30],"across":[31],"multiple":[32],"species.":[33,81],"Here,":[34],"we":[35],"report":[36],"a":[37,134],"web":[38,153],"platform":[39],"named":[40],"OrthoVenn":[41,54,107,109,123,147],"that":[42],"useful":[44],"for":[45,65,133],"genome":[46],"comparisons":[48],"visualization":[50],"clusters.":[53],"provides":[55],"coverage":[56],"vertebrates,":[58],"metazoa,":[59],"protists,":[60],"fungi,":[61],"plants":[62],"bacteria":[64],"comparison":[67],"also":[72,110],"supports":[73],"uploading":[74],"customized":[76,135],"protein":[77],"sequences":[78],"from":[79],"user-defined":[80],"An":[82],"interactive":[83],"Venn":[84],"diagram,":[85],"summary":[86],"counts,":[87],"functional":[89],"summaries":[90],"disjunction":[93],"intersection":[95],"shared":[98],"between":[99],"species":[100],"are":[101],"displayed":[102],"as":[103],"part":[104],"result.":[108],"includes":[111],"in-depth":[112],"views":[113],"using":[117],"various":[118],"sequence":[119],"tools.":[121],"Furthermore,":[122],"identifies":[124],"single":[128],"copy":[129],"genes":[130,141],"allows":[132],"search":[136],"specific":[140],"through":[142],"key":[143],"words":[144],"or":[145,159],"BLAST.":[146],"efficient":[150],"user-friendly":[152],"server":[154],"freely":[155],"accessible":[156],"at":[157],"http://probes.pw.usda.gov/OrthoVenn":[158],"http://aegilops.wheat.ucdavis.edu/OrthoVenn.":[160]},"counts_by_year":[{"year":2026,"cited_by_count":8},{"year":2025,"cited_by_count":24},{"year":2024,"cited_by_count":86},{"year":2023,"cited_by_count":154},{"year":2022,"cited_by_count":129},{"year":2021,"cited_by_count":147},{"year":2020,"cited_by_count":149},{"year":2019,"cited_by_count":104},{"year":2018,"cited_by_count":76},{"year":2017,"cited_by_count":39},{"year":2016,"cited_by_count":13},{"year":2015,"cited_by_count":1}],"updated_date":"2026-06-07T08:38:57.713557","created_date":"2016-06-24T00:00:00"}
