{"id":"https://openalex.org/W1781517108","doi":"https://doi.org/10.1093/nar/gkv450","title":"NaviCell Web Service for network-based data visualization","display_name":"NaviCell Web Service for network-based data visualization","publication_year":2015,"publication_date":"2015-05-09","ids":{"openalex":"https://openalex.org/W1781517108","doi":"https://doi.org/10.1093/nar/gkv450","mag":"1781517108","pmid":"https://pubmed.ncbi.nlm.nih.gov/25958393"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkv450","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv450","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/nar/gkv450","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5031779274","display_name":"\u00c9ric Bonnet","orcid":"https://orcid.org/0000-0002-8468-2867"},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I70768539","display_name":"\u00c9cole Nationale Sup\u00e9rieure des Mines de Paris","ror":"https://ror.org/04y8cs423","country_code":"FR","type":"education","lineage":["https://openalex.org/I190752583","https://openalex.org/I2746051580","https://openalex.org/I70768539"]},{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Eric Bonnet","raw_affiliation_strings":["Institut Curie, 26 rue d'Ulm, 75248 Paris, France INSERM, U900, 75248 Paris, France Mines ParisTech, 77300 Fontainebleau, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut Curie, 26 rue d'Ulm, 75248 Paris, France INSERM, U900, 75248 Paris, France Mines ParisTech, 77300 Fontainebleau, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I70768539","https://openalex.org/I80043"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091579624","display_name":"Eric Viara","orcid":null},"institutions":[{"id":"https://openalex.org/I4210127725","display_name":"SYSTRA (France)","ror":"https://ror.org/03d2s9h69","country_code":"FR","type":"company","lineage":["https://openalex.org/I4210127725"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Eric Viara","raw_affiliation_strings":["Sysra, 91330 Yerres, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Sysra, 91330 Yerres, France","institution_ids":["https://openalex.org/I4210127725"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029262309","display_name":"Inna Kuperstein","orcid":"https://orcid.org/0000-0001-8086-8915"},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I70768539","display_name":"\u00c9cole Nationale Sup\u00e9rieure des Mines de Paris","ror":"https://ror.org/04y8cs423","country_code":"FR","type":"education","lineage":["https://openalex.org/I190752583","https://openalex.org/I2746051580","https://openalex.org/I70768539"]},{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Inna Kuperstein","raw_affiliation_strings":["Institut Curie, 26 rue d'Ulm, 75248 Paris, France INSERM, U900, 75248 Paris, France Mines ParisTech, 77300 Fontainebleau, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut Curie, 26 rue d'Ulm, 75248 Paris, France INSERM, U900, 75248 Paris, France Mines ParisTech, 77300 Fontainebleau, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I70768539","https://openalex.org/I80043"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061154457","display_name":"Laurence Calzone","orcid":"https://orcid.org/0000-0002-7835-1148"},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I70768539","display_name":"\u00c9cole Nationale Sup\u00e9rieure des Mines de Paris","ror":"https://ror.org/04y8cs423","country_code":"FR","type":"education","lineage":["https://openalex.org/I190752583","https://openalex.org/I2746051580","https://openalex.org/I70768539"]},{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Laurence Calzone","raw_affiliation_strings":["Institut Curie, 26 rue d'Ulm, 75248 Paris, France INSERM, U900, 75248 Paris, France Mines ParisTech, 77300 Fontainebleau, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut Curie, 26 rue d'Ulm, 75248 Paris, France INSERM, U900, 75248 Paris, France Mines ParisTech, 77300 Fontainebleau, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I70768539","https://openalex.org/I80043"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091794519","display_name":"David Cohen","orcid":"https://orcid.org/0000-0003-4321-4554"},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I70768539","display_name":"\u00c9cole Nationale Sup\u00e9rieure des Mines de Paris","ror":"https://ror.org/04y8cs423","country_code":"FR","type":"education","lineage":["https://openalex.org/I190752583","https://openalex.org/I2746051580","https://openalex.org/I70768539"]},{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"David P. A. Cohen","raw_affiliation_strings":["Institut Curie, 26 rue d'Ulm, 75248 Paris, France INSERM, U900, 75248 Paris, France Mines ParisTech, 77300 Fontainebleau, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut Curie, 26 rue d'Ulm, 75248 Paris, France INSERM, U900, 75248 Paris, France Mines ParisTech, 77300 Fontainebleau, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I70768539","https://openalex.org/I80043"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062067186","display_name":"Emmanuel Barillot","orcid":"https://orcid.org/0000-0003-2724-2002"},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I70768539","display_name":"\u00c9cole Nationale Sup\u00e9rieure des Mines de Paris","ror":"https://ror.org/04y8cs423","country_code":"FR","type":"education","lineage":["https://openalex.org/I190752583","https://openalex.org/I2746051580","https://openalex.org/I70768539"]},{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Emmanuel Barillot","raw_affiliation_strings":["Institut Curie, 26 rue d'Ulm, 75248 Paris, France INSERM, U900, 75248 Paris, France Mines ParisTech, 77300 Fontainebleau, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut Curie, 26 rue d'Ulm, 75248 Paris, France INSERM, U900, 75248 Paris, France Mines ParisTech, 77300 Fontainebleau, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I70768539","https://openalex.org/I80043"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5077253721","display_name":"Andre\u00ef Zinovyev","orcid":"https://orcid.org/0000-0002-9517-7284"},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Andrei Zinovyev","raw_affiliation_strings":["Institut Curie, 26 rue d'Ulm, 75248 Paris, France INSERM, U900, 75248 Paris, France Mines ParisTech, 77300 Fontainebleau, France andrei.zinovyev@curie.fr"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut Curie, 26 rue d'Ulm, 75248 Paris, France INSERM, U900, 75248 Paris, France Mines ParisTech, 77300 Fontainebleau, France andrei.zinovyev@curie.fr","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I80043"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5077253721"],"corresponding_institution_ids":["https://openalex.org/I154526488","https://openalex.org/I80043"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":3.9159,"has_fulltext":false,"cited_by_count":37,"citation_normalized_percentile":{"value":0.94111485,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"43","issue":"W1","first_page":"W560","last_page":"W565"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9955000281333923,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.994700014591217,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.9087176322937012},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.6030651330947876},{"id":"https://openalex.org/keywords/service","display_name":"Service (business)","score":0.46536946296691895},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.43651577830314636},{"id":"https://openalex.org/keywords/graph-drawing","display_name":"Graph drawing","score":0.4287859797477722},{"id":"https://openalex.org/keywords/web-service","display_name":"Web service","score":0.42325758934020996},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.4229954779148102},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.40666407346725464},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3525918126106262},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.17742875218391418},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.14267703890800476}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.9087176322937012},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6030651330947876},{"id":"https://openalex.org/C2780378061","wikidata":"https://www.wikidata.org/wiki/Q25351891","display_name":"Service (business)","level":2,"score":0.46536946296691895},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.43651577830314636},{"id":"https://openalex.org/C112953755","wikidata":"https://www.wikidata.org/wiki/Q739462","display_name":"Graph drawing","level":3,"score":0.4287859797477722},{"id":"https://openalex.org/C35578498","wikidata":"https://www.wikidata.org/wiki/Q193424","display_name":"Web service","level":2,"score":0.42325758934020996},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.4229954779148102},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.40666407346725464},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3525918126106262},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.17742875218391418},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.14267703890800476},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C136264566","wikidata":"https://www.wikidata.org/wiki/Q159810","display_name":"Economy","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000544","descriptor_name":"Alzheimer Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000544","descriptor_name":"Alzheimer Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000544","descriptor_name":"Alzheimer Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011471","descriptor_name":"Prostatic Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011471","descriptor_name":"Prostatic Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011471","descriptor_name":"Prostatic Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D045744","descriptor_name":"Cell Line, Tumor","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D045744","descriptor_name":"Cell Line, Tumor","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D045744","descriptor_name":"Cell Line, Tumor","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gkv450","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv450","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:25958393","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25958393","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:europepmc.org:3458188","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4489283","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkv450","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv450","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":28,"referenced_works":["https://openalex.org/W571710515","https://openalex.org/W1807210160","https://openalex.org/W1820306635","https://openalex.org/W1967005434","https://openalex.org/W1970594207","https://openalex.org/W1989277387","https://openalex.org/W1995576455","https://openalex.org/W1998767819","https://openalex.org/W2000263957","https://openalex.org/W2001291669","https://openalex.org/W2023098599","https://openalex.org/W2027319259","https://openalex.org/W2036282245","https://openalex.org/W2038264484","https://openalex.org/W2043398720","https://openalex.org/W2048524108","https://openalex.org/W2069157810","https://openalex.org/W2103033592","https://openalex.org/W2119876770","https://openalex.org/W2121905803","https://openalex.org/W2123696077","https://openalex.org/W2135857985","https://openalex.org/W2141224543","https://openalex.org/W2150730731","https://openalex.org/W2153921000","https://openalex.org/W2155331065","https://openalex.org/W2172102555","https://openalex.org/W4237335579"],"related_works":["https://openalex.org/W2346931493","https://openalex.org/W4225274103","https://openalex.org/W2013728941","https://openalex.org/W2154046714","https://openalex.org/W2579659702","https://openalex.org/W2189613078","https://openalex.org/W1574055964","https://openalex.org/W2923661510","https://openalex.org/W2542318691","https://openalex.org/W2547096368"],"abstract_inverted_index":{"Data":[0],"visualization":[1,31,125,169],"is":[2,26],"an":[3],"essential":[4],"element":[5],"of":[6,19,32,71,78,151],"biological":[7,60],"research,":[8],"required":[9],"for":[10,29,44,99],"obtaining":[11],"insights":[12,172],"and":[13,21,42,54,89,127,145,183],"formulating":[14],"new":[15,171],"hypotheses":[16],"on":[17,76],"mechanisms":[18,175],"health":[20],"disease.":[22],"NaviCell":[23,48],"Web":[24,49],"Service":[25,50],"a":[27,112,119],"tool":[28,84,153],"network-based":[30],"'omics'":[33],"data":[34,38,74,129,168],"which":[35,122,167],"implements":[36],"several":[37,155],"visual":[39],"representation":[40],"methods":[41],"utilities":[43],"combining":[45],"them":[46],"together.":[47],"uses":[51],"Google":[52],"Maps":[53],"semantic":[55],"zooming":[56],"to":[57,138],"browse":[58],"large":[59],"network":[61],"maps,":[62],"represented":[63],"in":[64,103,166,177],"various":[65],"formats,":[66],"together":[67],"with":[68,154],"different":[69,139,163],"types":[70],"the":[72,83,94,149,152],"molecular":[73,174],"mapped":[75],"top":[77],"them.":[79],"For":[80],"achieving":[81],"this,":[82],"provides":[85,118,170],"standard":[86],"heatmaps,":[87],"barplots":[88],"glyphs":[90],"as":[91,93,107,181],"well":[92],"novel":[95],"map":[96],"staining":[97],"technique":[98],"grasping":[100],"large-scale":[101],"trends":[102],"numerical":[104],"values":[105],"(such":[106],"whole":[108],"transcriptome)":[109],"projected":[110],"onto":[111],"pathway":[113,159],"map.":[114],"The":[115],"web":[116],"service":[117],"server":[120],"mode,":[121],"allows":[123],"automating":[124],"tasks":[126],"retrieving":[128],"from":[130],"maps":[131,160],"via":[132],"RESTful":[133],"(standard":[134],"HTTP)":[135],"calls.":[136],"Bindings":[137],"programming":[140],"languages":[141],"are":[142],"provided":[143],"(Python":[144],"R).":[146],"We":[147],"illustrate":[148],"purpose":[150],"case":[156],"studies":[157],"using":[158],"created":[161],"by":[162],"research":[164],"groups,":[165],"into":[173],"involved":[176],"systemic":[178],"diseases":[179],"such":[180],"cancer":[182],"neurodegenerative":[184],"diseases.":[185]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":8},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":8},{"year":2015,"cited_by_count":5}],"updated_date":"2026-06-18T08:10:14.011955","created_date":"2025-10-10T00:00:00"}
