{"id":"https://openalex.org/W2163298631","doi":"https://doi.org/10.1093/nar/gkv368","title":"pyDockSAXS: protein\u2013protein complex structure by SAXS and computational docking","display_name":"pyDockSAXS: protein\u2013protein complex structure by SAXS and computational docking","publication_year":2015,"publication_date":"2015-04-20","ids":{"openalex":"https://openalex.org/W2163298631","doi":"https://doi.org/10.1093/nar/gkv368","mag":"2163298631","pmid":"https://pubmed.ncbi.nlm.nih.gov/25897115"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkv368","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv368","pdf_url":"https://academic.oup.com/nar/article-pdf/43/W1/W356/7476135/gkv368.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/43/W1/W356/7476135/gkv368.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5012374366","display_name":"Brian Jim\u00e9nez\u2010Garc\u00eda","orcid":"https://orcid.org/0000-0001-7786-2109"},"institutions":[{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]},{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Brian Jim\u00e9nez-Garc\u00eda","raw_affiliation_strings":["Joint BSC-CRG-IRB Research Program in Computational Biology, Barcelona Supercomputing Center, 08034 Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"Joint BSC-CRG-IRB Research Program in Computational Biology, Barcelona Supercomputing Center, 08034 Barcelona, Spain","institution_ids":["https://openalex.org/I9617848","https://openalex.org/I2799803557"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087135746","display_name":"Carles Pons","orcid":"https://orcid.org/0000-0002-9131-9089"},"institutions":[{"id":"https://openalex.org/I130238516","display_name":"University of Minnesota","ror":"https://ror.org/017zqws13","country_code":"US","type":"education","lineage":["https://openalex.org/I130238516"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Carles Pons","raw_affiliation_strings":["Department of Computer Science and Engineering, University of Minnesota, Minneapolis, MN 55455, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Minnesota, Minneapolis, MN 55455, USA","institution_ids":["https://openalex.org/I130238516"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081712139","display_name":"Dmitri I. Svergun","orcid":"https://orcid.org/0000-0003-0830-5696"},"institutions":[{"id":"https://openalex.org/I4210153543","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/050589e39","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560","https://openalex.org/I4210153543"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Dmitri I. Svergun","raw_affiliation_strings":["European Molecular Biology Laboratory, Hamburg Outstation, 22603 Hamburg, Germany"],"affiliations":[{"raw_affiliation_string":"European Molecular Biology Laboratory, Hamburg Outstation, 22603 Hamburg, Germany","institution_ids":["https://openalex.org/I4210153543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012799478","display_name":"Pau Bernad\u00f3","orcid":"https://orcid.org/0000-0001-7395-5922"},"institutions":[{"id":"https://openalex.org/I19894307","display_name":"Universit\u00e9 de Montpellier","ror":"https://ror.org/051escj72","country_code":"FR","type":"education","lineage":["https://openalex.org/I19894307"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"funder","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210100279","display_name":"Centre de Biologie Structurale","ror":"https://ror.org/0189yvq06","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I19894307","https://openalex.org/I4210100279"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Pau Bernad\u00f3","raw_affiliation_strings":["Centre de Biochimie Structurale, INSERM U1054, CNRS UMR 5048, Universit\u00e9 Montpellier 1 and 2, F-34090 Montpellier, France"],"affiliations":[{"raw_affiliation_string":"Centre de Biochimie Structurale, INSERM U1054, CNRS UMR 5048, Universit\u00e9 Montpellier 1 and 2, F-34090 Montpellier, France","institution_ids":["https://openalex.org/I4210100279","https://openalex.org/I154526488","https://openalex.org/I19894307","https://openalex.org/I1294671590"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5021117369","display_name":"Juan Fern\u00e1ndez\u2010Recio","orcid":"https://orcid.org/0000-0002-3986-7686"},"institutions":[{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]},{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Juan Fern\u00e1ndez-Recio","raw_affiliation_strings":["Joint BSC-CRG-IRB Research Program in Computational Biology, Barcelona Supercomputing Center, 08034 Barcelona, Spain juanf@bsc.es","Joint BSC-CRG-IRB Research Program in Computational Biology, Barcelona Supercomputing Center, 08034 Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"Joint BSC-CRG-IRB Research Program in Computational Biology, Barcelona Supercomputing Center, 08034 Barcelona, Spain juanf@bsc.es","institution_ids":[]},{"raw_affiliation_string":"Joint BSC-CRG-IRB Research Program in Computational Biology, Barcelona Supercomputing Center, 08034 Barcelona, Spain","institution_ids":["https://openalex.org/I9617848","https://openalex.org/I2799803557"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5012374366"],"corresponding_institution_ids":["https://openalex.org/I2799803557","https://openalex.org/I9617848"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":4.2138,"has_fulltext":true,"cited_by_count":73,"citation_normalized_percentile":{"value":0.95105625,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"43","issue":"W1","first_page":"W356","last_page":"W361"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/small-angle-x-ray-scattering","display_name":"Small-angle X-ray scattering","score":0.7476740479469299},{"id":"https://openalex.org/keywords/docking","display_name":"Docking (animal)","score":0.7242570519447327},{"id":"https://openalex.org/keywords/upload","display_name":"Upload","score":0.6257646679878235},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.5926732420921326},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5271836519241333},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4614352881908417},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.45767730474472046},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.45755258202552795},{"id":"https://openalex.org/keywords/protein\u2013protein-interaction","display_name":"Protein\u2013protein interaction","score":0.45540815591812134},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.4369674026966095},{"id":"https://openalex.org/keywords/computational-science","display_name":"Computational science","score":0.3585074543952942},{"id":"https://openalex.org/keywords/scattering","display_name":"Scattering","score":0.3060383200645447},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.18809708952903748},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.1024923026561737},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.09199494123458862}],"concepts":[{"id":"https://openalex.org/C131888329","wikidata":"https://www.wikidata.org/wiki/Q3027679","display_name":"Small-angle X-ray scattering","level":3,"score":0.7476740479469299},{"id":"https://openalex.org/C41685203","wikidata":"https://www.wikidata.org/wiki/Q1974042","display_name":"Docking (animal)","level":2,"score":0.7242570519447327},{"id":"https://openalex.org/C71901391","wikidata":"https://www.wikidata.org/wiki/Q7126699","display_name":"Upload","level":2,"score":0.6257646679878235},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.5926732420921326},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5271836519241333},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4614352881908417},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.45767730474472046},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.45755258202552795},{"id":"https://openalex.org/C11804247","wikidata":"https://www.wikidata.org/wiki/Q896177","display_name":"Protein\u2013protein interaction","level":2,"score":0.45540815591812134},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.4369674026966095},{"id":"https://openalex.org/C459310","wikidata":"https://www.wikidata.org/wiki/Q117801","display_name":"Computational science","level":1,"score":0.3585074543952942},{"id":"https://openalex.org/C191486275","wikidata":"https://www.wikidata.org/wiki/Q210028","display_name":"Scattering","level":2,"score":0.3060383200645447},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.18809708952903748},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.1024923026561737},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.09199494123458862},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.0},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.0},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014961","descriptor_name":"X-Ray Diffraction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014961","descriptor_name":"X-Ray Diffraction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014961","descriptor_name":"X-Ray Diffraction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D046912","descriptor_name":"Multiprotein Complexes","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D046912","descriptor_name":"Multiprotein Complexes","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D046912","descriptor_name":"Multiprotein Complexes","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D053838","descriptor_name":"Scattering, Small Angle","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053838","descriptor_name":"Scattering, Small Angle","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053838","descriptor_name":"Scattering, Small Angle","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/nar/gkv368","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv368","pdf_url":"https://academic.oup.com/nar/article-pdf/43/W1/W356/7476135/gkv368.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:25897115","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25897115","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:dnet:upcommonspor::45bc46897ece5a5fe358921939bda508","is_oa":false,"landing_page_url":"http://hdl.handle.net/2117/84631","pdf_url":null,"source":{"id":"https://openalex.org/S4306402641","display_name":"LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Cient\u00edficas)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4383465926","host_organization_name":"LA Referencia","host_organization_lineage":["https://openalex.org/I4383465926"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:europepmc.org:3458153","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4489248","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:upcommons.upc.edu:2117/84631","is_oa":true,"landing_page_url":"https://hdl.handle.net/2117/84631","pdf_url":null,"source":{"id":"https://openalex.org/S4210207057","display_name":"QRU Quaderns de Recerca en Urbanisme","issn_l":"2014-9689","issn":["2014-9689","2385-6777"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/P4310322448","host_organization_name":"Q71272178","host_organization_lineage":["https://openalex.org/P4310322448"],"host_organization_lineage_names":["Q71272178"],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/nar/gkv368","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv368","pdf_url":"https://academic.oup.com/nar/article-pdf/43/W1/W356/7476135/gkv368.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.550000011920929,"display_name":"Affordable and clean energy","id":"https://metadata.un.org/sdg/7"}],"awards":[{"id":"https://openalex.org/G1385750998","display_name":null,"funder_award_id":"ATIP-Avenir","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G3335229504","display_name":null,"funder_award_id":"Avenir","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G7800705679","display_name":null,"funder_award_id":"I+D+i","funder_id":"https://openalex.org/F4320321837","funder_display_name":"Ministerio de Econom\u00eda y Competitividad"},{"id":"https://openalex.org/G8357192574","display_name":null,"funder_award_id":"BIO2013-48213-R","funder_id":"https://openalex.org/F4320321837","funder_display_name":"Ministerio de Econom\u00eda y Competitividad"}],"funders":[{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"},{"id":"https://openalex.org/F4320321837","display_name":"Ministerio de Econom\u00eda y Competitividad","ror":"https://ror.org/034900433"},{"id":"https://openalex.org/F4320322930","display_name":"Ministerio de Ciencia e Innovaci\u00f3n","ror":"https://ror.org/034900433"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2163298631.pdf","grobid_xml":"https://content.openalex.org/works/W2163298631.grobid-xml"},"referenced_works_count":42,"referenced_works":["https://openalex.org/W1965237975","https://openalex.org/W1965379872","https://openalex.org/W1965410913","https://openalex.org/W1966041739","https://openalex.org/W1968922152","https://openalex.org/W1984530381","https://openalex.org/W1988122006","https://openalex.org/W1999192385","https://openalex.org/W1999218203","https://openalex.org/W2000776641","https://openalex.org/W2007517854","https://openalex.org/W2009284411","https://openalex.org/W2010734457","https://openalex.org/W2015403140","https://openalex.org/W2018410079","https://openalex.org/W2021375991","https://openalex.org/W2024935778","https://openalex.org/W2027403155","https://openalex.org/W2031746097","https://openalex.org/W2048643046","https://openalex.org/W2066088601","https://openalex.org/W2074104861","https://openalex.org/W2086395824","https://openalex.org/W2090672363","https://openalex.org/W2095157453","https://openalex.org/W2097698280","https://openalex.org/W2107505802","https://openalex.org/W2113654464","https://openalex.org/W2121481614","https://openalex.org/W2126265982","https://openalex.org/W2129414710","https://openalex.org/W2136777954","https://openalex.org/W2137212933","https://openalex.org/W2137817087","https://openalex.org/W2142654956","https://openalex.org/W2153983456","https://openalex.org/W2159845262","https://openalex.org/W2160868144","https://openalex.org/W2162942780","https://openalex.org/W2165531467","https://openalex.org/W2474832387","https://openalex.org/W2915344963"],"related_works":["https://openalex.org/W4234342421","https://openalex.org/W2909040123","https://openalex.org/W2914490533","https://openalex.org/W2145118195","https://openalex.org/W2107326055","https://openalex.org/W3118344282","https://openalex.org/W2021213676","https://openalex.org/W2055457867","https://openalex.org/W1970785155","https://openalex.org/W1832993298"],"abstract_inverted_index":{"Structural":[0],"characterization":[1],"of":[2,73,93,116,150,171],"protein-protein":[3,56,95],"interactions":[4],"at":[5,44],"molecular":[6],"level":[7],"is":[8,192],"essential":[9],"to":[10,55,104,124,178,195],"understand":[11],"biological":[12],"processes":[13],"and":[14,70,121,140],"identify":[15],"new":[16],"therapeutic":[17],"opportunities.":[18],"However,":[19],"atomic":[20,50,71],"resolution":[21],"structural":[22,33,134,151],"techniques":[23],"cannot":[24],"keep":[25],"pace":[26],"with":[27,63],"current":[28],"advances":[29],"in":[30],"interactomics.":[31],"Low-resolution":[32],"techniques,":[34],"such":[35],"as":[36],"small-angle":[37],"X-ray":[38],"scattering":[39],"(SAXS),":[40],"can":[41,60,164],"be":[42,61],"applied":[43],"larger":[45],"scale,":[46],"but":[47],"they":[48],"miss":[49],"details.":[51],"For":[52],"efficient":[53],"application":[54],"complexes,":[57],"low-resolution":[58],"information":[59],"combined":[62],"theoretical":[64],"methods":[65],"that":[66,84,109],"provide":[67],"energetic":[68],"description":[69],"details":[72],"the":[74,79,91,137,154,158,176,180],"interactions.":[75],"Here":[76],"we":[77],"present":[78],"pyDockSAXS":[80,159],"web":[81],"server":[82,145,191],"(http://life.bsc.es/pid/pydocksaxs)":[83],"provides":[85,147],"an":[86],"automatic":[87],"pipeline":[88],"for":[89,136,153],"modeling":[90],"structure":[92],"a":[94,114,141,148,167],"complex":[96],"from":[97],"SAXS":[98,126,142],"data.":[99,127],"The":[100,128,144,162,190],"method":[101],"uses":[102],"FTDOCK":[103],"generate":[105],"rigid-body":[106],"docking":[107,172,181],"models":[108,135,152],"are":[110,133],"subsequently":[111],"evaluated":[112],"by":[113,157,183],"combination":[115],"pyDock":[117],"energy-based":[118],"scoring":[119,160],"function":[120],"their":[122],"capacity":[123],"describe":[125],"only":[129],"required":[130],"input":[131],"files":[132],"interacting":[138],"partners":[139],"curve.":[143],"automatically":[146],"series":[149],"complex,":[155],"sorted":[156],"function.":[161],"user":[163],"also":[165],"upload":[166],"previously":[168],"computed":[169],"set":[170],"poses,":[173],"which":[174],"opens":[175],"possibility":[177],"filter":[179],"solutions":[182],"potential":[184],"interface":[185],"residues":[186],"or":[187],"symmetry":[188],"restraints.":[189],"freely":[193],"available":[194],"all":[196],"users":[197],"without":[198],"restriction.":[199]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":3},{"year":2022,"cited_by_count":7},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":10},{"year":2019,"cited_by_count":11},{"year":2018,"cited_by_count":8},{"year":2017,"cited_by_count":8},{"year":2016,"cited_by_count":13},{"year":2015,"cited_by_count":1}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
