{"id":"https://openalex.org/W2172609270","doi":"https://doi.org/10.1093/nar/gkv1240","title":"dbPTM 2016: 10-year anniversary of a resource for post-translational modification of proteins","display_name":"dbPTM 2016: 10-year anniversary of a resource for post-translational modification of proteins","publication_year":2015,"publication_date":"2015-11-17","ids":{"openalex":"https://openalex.org/W2172609270","doi":"https://doi.org/10.1093/nar/gkv1240","mag":"2172609270","pmid":"https://pubmed.ncbi.nlm.nih.gov/26578568"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkv1240","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv1240","pdf_url":"https://academic.oup.com/nar/article-pdf/44/D1/D435/16661738/gkv1240.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/44/D1/D435/16661738/gkv1240.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101875147","display_name":"Kai\u2010Yao Huang","orcid":"https://orcid.org/0000-0001-9855-1035"},"institutions":[{"id":"https://openalex.org/I99908691","display_name":"Yuan Ze University","ror":"https://ror.org/01fv1ds98","country_code":"TW","type":"education","lineage":["https://openalex.org/I99908691"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Kai-Yao Huang","raw_affiliation_strings":["Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, Taiwan","institution_ids":["https://openalex.org/I99908691"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069832396","display_name":"Min-Gang Su","orcid":null},"institutions":[{"id":"https://openalex.org/I99908691","display_name":"Yuan Ze University","ror":"https://ror.org/01fv1ds98","country_code":"TW","type":"education","lineage":["https://openalex.org/I99908691"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Min-Gang Su","raw_affiliation_strings":["Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, Taiwan","institution_ids":["https://openalex.org/I99908691"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072614793","display_name":"Hui\u2010Ju Kao","orcid":null},"institutions":[{"id":"https://openalex.org/I99908691","display_name":"Yuan Ze University","ror":"https://ror.org/01fv1ds98","country_code":"TW","type":"education","lineage":["https://openalex.org/I99908691"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Hui-Ju Kao","raw_affiliation_strings":["Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, Taiwan","institution_ids":["https://openalex.org/I99908691"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061170032","display_name":"Yun-Chung Hsieh","orcid":null},"institutions":[{"id":"https://openalex.org/I99908691","display_name":"Yuan Ze University","ror":"https://ror.org/01fv1ds98","country_code":"TW","type":"education","lineage":["https://openalex.org/I99908691"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Yun-Chung Hsieh","raw_affiliation_strings":["Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, Taiwan","institution_ids":["https://openalex.org/I99908691"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062800975","display_name":"Jhih-Hua Jhong","orcid":"https://orcid.org/0000-0001-6158-5207"},"institutions":[{"id":"https://openalex.org/I99908691","display_name":"Yuan Ze University","ror":"https://ror.org/01fv1ds98","country_code":"TW","type":"education","lineage":["https://openalex.org/I99908691"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Jhih-Hua Jhong","raw_affiliation_strings":["Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, Taiwan","institution_ids":["https://openalex.org/I99908691"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062785407","display_name":"Kuang-Hao Cheng","orcid":null},"institutions":[{"id":"https://openalex.org/I99908691","display_name":"Yuan Ze University","ror":"https://ror.org/01fv1ds98","country_code":"TW","type":"education","lineage":["https://openalex.org/I99908691"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Kuang-Hao Cheng","raw_affiliation_strings":["Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, Taiwan","institution_ids":["https://openalex.org/I99908691"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040277769","display_name":"Hsien\u2010Da Huang","orcid":"https://orcid.org/0000-0003-2857-7023"},"institutions":[{"id":"https://openalex.org/I148366613","display_name":"National Yang Ming Chiao Tung University","ror":"https://ror.org/00se2k293","country_code":"TW","type":"education","lineage":["https://openalex.org/I148366613"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Hsien-Da Huang","raw_affiliation_strings":["Department of Biological Science and Technology, National Chiao Tung University, Hsinchu 300, Taiwan Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsinchu 300, Taiwan bryan@mail.nctu.edu.tw","Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsinchu 300, Taiwan","Department of Biological Science and Technology, National Chiao Tung University, Hsinchu 300, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biological Science and Technology, National Chiao Tung University, Hsinchu 300, Taiwan Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsinchu 300, Taiwan bryan@mail.nctu.edu.tw","institution_ids":["https://openalex.org/I148366613"]},{"raw_affiliation_string":"Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsinchu 300, Taiwan","institution_ids":["https://openalex.org/I148366613"]},{"raw_affiliation_string":"Department of Biological Science and Technology, National Chiao Tung University, Hsinchu 300, Taiwan","institution_ids":["https://openalex.org/I148366613"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5045675277","display_name":"Tzong-Yi Lee","orcid":"https://orcid.org/0000-0001-8475-7868"},"institutions":[{"id":"https://openalex.org/I99908691","display_name":"Yuan Ze University","ror":"https://ror.org/01fv1ds98","country_code":"TW","type":"education","lineage":["https://openalex.org/I99908691"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Tzong-Yi Lee","raw_affiliation_strings":["Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, Taiwan Innovation Center for Big Data and Digital Convergence, Yuan Ze University, Taoyuan 320, Taiwan francis@saturn.yzu.edu.tw","Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, Taiwan","Innovation Center for Big Data and Digital Convergence, Yuan Ze University, Taoyuan 320, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, Taiwan Innovation Center for Big Data and Digital Convergence, Yuan Ze University, Taoyuan 320, Taiwan francis@saturn.yzu.edu.tw","institution_ids":["https://openalex.org/I99908691"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, Taiwan","institution_ids":["https://openalex.org/I99908691"]},{"raw_affiliation_string":"Innovation Center for Big Data and Digital Convergence, Yuan Ze University, Taoyuan 320, Taiwan","institution_ids":["https://openalex.org/I99908691"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5045675277"],"corresponding_institution_ids":["https://openalex.org/I99908691"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":8.5132,"has_fulltext":false,"cited_by_count":174,"citation_normalized_percentile":{"value":0.98627567,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":100},"biblio":{"volume":"44","issue":"D1","first_page":"D435","last_page":"D446"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12505","display_name":"Peptidase Inhibition and Analysis","score":0.9934999942779541,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T12505","display_name":"Peptidase Inhibition and Analysis","score":0.9934999942779541,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9830999970436096,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9828000068664551,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.9018962979316711},{"id":"https://openalex.org/keywords/posttranslational-modification","display_name":"Posttranslational modification","score":0.7628381848335266},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4434770941734314},{"id":"https://openalex.org/keywords/translational-research","display_name":"Translational research","score":0.4239906072616577},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.32984524965286255},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.22019243240356445},{"id":"https://openalex.org/keywords/biotechnology","display_name":"Biotechnology","score":0.1641392707824707},{"id":"https://openalex.org/keywords/enzyme","display_name":"Enzyme","score":0.09655839204788208}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.9018962979316711},{"id":"https://openalex.org/C100631289","wikidata":"https://www.wikidata.org/wiki/Q898362","display_name":"Posttranslational modification","level":3,"score":0.7628381848335266},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4434770941734314},{"id":"https://openalex.org/C128544194","wikidata":"https://www.wikidata.org/wiki/Q474859","display_name":"Translational research","level":2,"score":0.4239906072616577},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.32984524965286255},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.22019243240356445},{"id":"https://openalex.org/C150903083","wikidata":"https://www.wikidata.org/wiki/Q7108","display_name":"Biotechnology","level":1,"score":0.1641392707824707},{"id":"https://openalex.org/C181199279","wikidata":"https://www.wikidata.org/wiki/Q8047","display_name":"Enzyme","level":2,"score":0.09655839204788208}],"mesh":[{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D006031","descriptor_name":"Glycosylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006031","descriptor_name":"Glycosylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006031","descriptor_name":"Glycosylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011499","descriptor_name":"Protein Processing, Post-Translational","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011499","descriptor_name":"Protein Processing, Post-Translational","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011499","descriptor_name":"Protein Processing, Post-Translational","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gkv1240","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv1240","pdf_url":"https://academic.oup.com/nar/article-pdf/44/D1/D435/16661738/gkv1240.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:26578568","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26578568","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:europepmc.org:3680793","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4702878","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:open-archive.highwire.org:nar:44/D1/D435","is_oa":false,"landing_page_url":"http://nar.oxfordjournals.org/cgi/content/short/44/D1/D435","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"}],"best_oa_location":{"id":"doi:10.1093/nar/gkv1240","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv1240","pdf_url":"https://academic.oup.com/nar/article-pdf/44/D1/D435/16661738/gkv1240.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":76,"referenced_works":["https://openalex.org/W1270834676","https://openalex.org/W1517270567","https://openalex.org/W1568400197","https://openalex.org/W1926257253","https://openalex.org/W1970039616","https://openalex.org/W1980027181","https://openalex.org/W1984537356","https://openalex.org/W1989064680","https://openalex.org/W1993245113","https://openalex.org/W1996003960","https://openalex.org/W1999750052","https://openalex.org/W2001939488","https://openalex.org/W2005547193","https://openalex.org/W2007805002","https://openalex.org/W2008708467","https://openalex.org/W2016088798","https://openalex.org/W2018518196","https://openalex.org/W2029406337","https://openalex.org/W2031028006","https://openalex.org/W2034293882","https://openalex.org/W2034890309","https://openalex.org/W2042003745","https://openalex.org/W2043274355","https://openalex.org/W2048996615","https://openalex.org/W2058289888","https://openalex.org/W2062419920","https://openalex.org/W2062510288","https://openalex.org/W2063866450","https://openalex.org/W2068244478","https://openalex.org/W2075319133","https://openalex.org/W2079056345","https://openalex.org/W2080221075","https://openalex.org/W2080559907","https://openalex.org/W2082106887","https://openalex.org/W2088456241","https://openalex.org/W2091352656","https://openalex.org/W2093901402","https://openalex.org/W2095867585","https://openalex.org/W2096173332","https://openalex.org/W2100683979","https://openalex.org/W2102621836","https://openalex.org/W2103495854","https://openalex.org/W2109021234","https://openalex.org/W2110181121","https://openalex.org/W2110344625","https://openalex.org/W2116062594","https://openalex.org/W2117969524","https://openalex.org/W2121417968","https://openalex.org/W2122863289","https://openalex.org/W2129137060","https://openalex.org/W2130277691","https://openalex.org/W2130488902","https://openalex.org/W2130687290","https://openalex.org/W2131848047","https://openalex.org/W2134129243","https://openalex.org/W2134873394","https://openalex.org/W2135656292","https://openalex.org/W2140453812","https://openalex.org/W2141869864","https://openalex.org/W2142025319","https://openalex.org/W2148830285","https://openalex.org/W2149376055","https://openalex.org/W2154173127","https://openalex.org/W2155853203","https://openalex.org/W2156125289","https://openalex.org/W2157122545","https://openalex.org/W2162151166","https://openalex.org/W2162172965","https://openalex.org/W2164412127","https://openalex.org/W2165253681","https://openalex.org/W2172088918","https://openalex.org/W2441475706","https://openalex.org/W2739999456","https://openalex.org/W4213402163","https://openalex.org/W6630924711","https://openalex.org/W6680709819"],"related_works":["https://openalex.org/W2082860237","https://openalex.org/W2119695867","https://openalex.org/W2130076355","https://openalex.org/W1990804418","https://openalex.org/W1993764875","https://openalex.org/W2046158694","https://openalex.org/W2788277189","https://openalex.org/W1971568933","https://openalex.org/W4283798085","https://openalex.org/W2127236662"],"abstract_inverted_index":{"Owing":[0],"to":[1,136,165,183,231,250,253],"the":[2,5,15,47,62,103,121,138,150,158,233,243],"importance":[3],"of":[4,9,24,33,45,56,123,141,153,160,168,240],"post-translational":[6],"modifications":[7],"(PTMs)":[8],"proteins":[10],"in":[11,149,205],"regulating":[12],"biological":[13],"processes,":[14],"dbPTM":[16],"(http://dbPTM.mbc.nctu.edu.tw/)":[17],"was":[18],"developed":[19],"as":[20,84],"a":[21,53,132,238],"comprehensive":[22,54],"database":[23,175],"experimentally":[25,57],"verified":[26,58],"PTMs":[27,35],"from":[28,89,109],"several":[29],"databases":[30,73],"with":[31,79,219],"annotations":[32],"potential":[34],"for":[36,69,195,237],"all":[37,71,161],"UniProtKB":[38],"protein":[39,166],"entries.":[40],"For":[41],"this":[42,93,129,209,254],"10th":[43],"anniversary":[44],"dbPTM,":[46],"updated":[48],"resource":[49],"provides":[50],"not":[51],"only":[52],"dataset":[55,135],"PTMs,":[59],"supported":[60],"by":[61,117],"literature,":[63],"but":[64],"also":[65,224],"an":[66],"integrative":[67],"interface":[68,245],"accessing":[70],"available":[72,124],"and":[74,107,177,192,228,248],"tools":[75],"that":[76,216],"are":[77,217],"associated":[78,218],"PTM":[80,87,125,143,154,163,196,214,234],"analysis.":[81],"As":[82,120],"well":[83],"collecting":[85],"experimental":[86,162],"data":[88],"14":[90],"public":[91],"databases,":[92],"update":[94,210,223],"manually":[95],"curates":[96],"over":[97,212],"12":[98],"000":[99],"modified":[100],"peptides,":[101],"including":[102],"emerging":[104],"S-nitrosylation,":[105],"S-glutathionylation":[106],"succinylation,":[108],"approximately":[110],"500":[111],"research":[112],"articles,":[113],"which":[114,180],"were":[115],"retrieved":[116],"text":[118],"mining.":[119],"number":[122],"prediction":[126,144],"methods":[127],"increases,":[128],"work":[130],"compiles":[131],"non-homologous":[133],"benchmark":[134],"evaluate":[137],"predictive":[139],"power":[140],"online":[142],"tools.":[145],"An":[146],"increasing":[147],"interest":[148],"structural":[151],"investigation":[152],"substrate":[155,197],"sites":[156,198,215],"motivated":[157],"mapping":[159],"peptides":[164],"entries":[167],"Protein":[169],"Data":[170],"Bank":[171],"(PDB)":[172],"based":[173],"on":[174,199],"identifier":[176],"sequence":[178],"identity,":[179],"enables":[181],"users":[182],"examine":[184],"spatially":[185],"neighboring":[186],"amino":[187],"acids,":[188],"solvent-accessible":[189],"surface":[190],"area":[191],"side-chain":[193],"orientations":[194],"tertiary":[200],"structures.":[201],"Since":[202],"drug":[203,220],"binding":[204],"PDB":[206],"is":[207,246],"annotated,":[208],"identified":[211],"1100":[213],"binding.":[221],"The":[222],"integrates":[225],"metabolic":[226],"pathways":[227],"protein-protein":[229],"interactions":[230],"support":[232],"network":[235],"analysis":[236],"group":[239],"proteins.":[241],"Finally,":[242],"web":[244],"redesigned":[247],"enhanced":[249],"facilitate":[251],"access":[252],"resource.":[255]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":10},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":20},{"year":2021,"cited_by_count":21},{"year":2020,"cited_by_count":26},{"year":2019,"cited_by_count":25},{"year":2018,"cited_by_count":27},{"year":2017,"cited_by_count":17},{"year":2016,"cited_by_count":15}],"updated_date":"2026-05-19T21:40:30.786675","created_date":"2025-10-10T00:00:00"}
