{"id":"https://openalex.org/W1822577623","doi":"https://doi.org/10.1093/nar/gkv1127","title":"sRNATarBase 3.0: an updated database for sRNA-target interactions in bacteria","display_name":"sRNATarBase 3.0: an updated database for sRNA-target interactions in bacteria","publication_year":2015,"publication_date":"2015-10-25","ids":{"openalex":"https://openalex.org/W1822577623","doi":"https://doi.org/10.1093/nar/gkv1127","mag":"1822577623","pmid":"https://pubmed.ncbi.nlm.nih.gov/26503244"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkv1127","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv1127","pdf_url":"https://academic.oup.com/nar/article-pdf/44/D1/D248/16661425/gkv1127.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/44/D1/D248/16661425/gkv1127.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5057240038","display_name":"Jiang Wang","orcid":"https://orcid.org/0000-0002-0085-9056"},"institutions":[{"id":"https://openalex.org/I4391767653","display_name":"Institute of Basic Medical Sciences of the Chinese Academy of Medical Sciences","ror":"https://ror.org/055qbch41","country_code":null,"type":"facility","lineage":["https://openalex.org/I200296433","https://openalex.org/I4391767653"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jiang Wang","raw_affiliation_strings":["Center of Computational Biology, Beijing Institute of Basic Medical Sciences, Haidian district, Beijing 100850, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center of Computational Biology, Beijing Institute of Basic Medical Sciences, Haidian district, Beijing 100850, China","institution_ids":["https://openalex.org/I4391767653"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100706825","display_name":"Tao Liu","orcid":"https://orcid.org/0000-0003-1701-6618"},"institutions":[{"id":"https://openalex.org/I4391767653","display_name":"Institute of Basic Medical Sciences of the Chinese Academy of Medical Sciences","ror":"https://ror.org/055qbch41","country_code":null,"type":"facility","lineage":["https://openalex.org/I200296433","https://openalex.org/I4391767653"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tao Liu","raw_affiliation_strings":["Center of Computational Biology, Beijing Institute of Basic Medical Sciences, Haidian district, Beijing 100850, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center of Computational Biology, Beijing Institute of Basic Medical Sciences, Haidian district, Beijing 100850, China","institution_ids":["https://openalex.org/I4391767653"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087831727","display_name":"Bo Zhao","orcid":"https://orcid.org/0000-0002-8004-9538"},"institutions":[{"id":"https://openalex.org/I4391767653","display_name":"Institute of Basic Medical Sciences of the Chinese Academy of Medical Sciences","ror":"https://ror.org/055qbch41","country_code":null,"type":"facility","lineage":["https://openalex.org/I200296433","https://openalex.org/I4391767653"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bo Zhao","raw_affiliation_strings":["Center of Computational Biology, Beijing Institute of Basic Medical Sciences, Haidian district, Beijing 100850, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center of Computational Biology, Beijing Institute of Basic Medical Sciences, Haidian district, Beijing 100850, China","institution_ids":["https://openalex.org/I4391767653"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016464187","display_name":"Qixuan Lu","orcid":null},"institutions":[{"id":"https://openalex.org/I4391767653","display_name":"Institute of Basic Medical Sciences of the Chinese Academy of Medical Sciences","ror":"https://ror.org/055qbch41","country_code":null,"type":"facility","lineage":["https://openalex.org/I200296433","https://openalex.org/I4391767653"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qixuan Lu","raw_affiliation_strings":["Center of Computational Biology, Beijing Institute of Basic Medical Sciences, Haidian district, Beijing 100850, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center of Computational Biology, Beijing Institute of Basic Medical Sciences, Haidian district, Beijing 100850, China","institution_ids":["https://openalex.org/I4391767653"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100401128","display_name":"Zheng Wang","orcid":"https://orcid.org/0009-0005-6678-8106"},"institutions":[{"id":"https://openalex.org/I4391767653","display_name":"Institute of Basic Medical Sciences of the Chinese Academy of Medical Sciences","ror":"https://ror.org/055qbch41","country_code":null,"type":"facility","lineage":["https://openalex.org/I200296433","https://openalex.org/I4391767653"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zheng Wang","raw_affiliation_strings":["Center of Computational Biology, Beijing Institute of Basic Medical Sciences, Haidian district, Beijing 100850, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center of Computational Biology, Beijing Institute of Basic Medical Sciences, Haidian district, Beijing 100850, China","institution_ids":["https://openalex.org/I4391767653"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113705365","display_name":"Yuan Cao","orcid":"https://orcid.org/0000-0002-2681-8711"},"institutions":[{"id":"https://openalex.org/I4210157767","display_name":"Jinan Military General Hospital","ror":"https://ror.org/05chjan92","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210157767"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuan Cao","raw_affiliation_strings":["Department of Laboratory Medicine, Jinan Military General Hospital, Jinan, Shandong 250031, China labs.net@gmail.com","Department of Laboratory Medicine, Jinan Military General Hospital, Jinan, Shandong 250031, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Laboratory Medicine, Jinan Military General Hospital, Jinan, Shandong 250031, China labs.net@gmail.com","institution_ids":["https://openalex.org/I4210157767"]},{"raw_affiliation_string":"Department of Laboratory Medicine, Jinan Military General Hospital, Jinan, Shandong 250031, China","institution_ids":["https://openalex.org/I4210157767"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5056217834","display_name":"Wuju Li","orcid":"https://orcid.org/0000-0003-4613-9692"},"institutions":[{"id":"https://openalex.org/I4210161752","display_name":"Beijing Haidian Hospital","ror":"https://ror.org/058x5eq06","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210161752"]},{"id":"https://openalex.org/I4391767653","display_name":"Institute of Basic Medical Sciences of the Chinese Academy of Medical Sciences","ror":"https://ror.org/055qbch41","country_code":null,"type":"facility","lineage":["https://openalex.org/I200296433","https://openalex.org/I4391767653"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Wuju Li","raw_affiliation_strings":["Center of Computational Biology, Beijing Institute of Basic Medical Sciences, Haidian district, Beijing 100850, China wujuchina@126.com","Center of Computational Biology, Beijing Institute of Basic Medical Sciences, Haidian district, Beijing 100850, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center of Computational Biology, Beijing Institute of Basic Medical Sciences, Haidian district, Beijing 100850, China wujuchina@126.com","institution_ids":["https://openalex.org/I4210161752"]},{"raw_affiliation_string":"Center of Computational Biology, Beijing Institute of Basic Medical Sciences, Haidian district, Beijing 100850, China","institution_ids":["https://openalex.org/I4391767653"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5056217834"],"corresponding_institution_ids":["https://openalex.org/I4210161752","https://openalex.org/I4391767653"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":2.8617,"has_fulltext":true,"cited_by_count":43,"citation_normalized_percentile":{"value":0.90974147,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"44","issue":"D1","first_page":"D248","last_page":"D253"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10120","display_name":"Bacterial Genetics and Biotechnology","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/transfer-rna","display_name":"Transfer RNA","score":0.8701675534248352},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7554804086685181},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6175608038902283},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.4558417499065399},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.4392392039299011},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.3973856270313263},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.35003724694252014},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.2569093704223633},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.14431777596473694}],"concepts":[{"id":"https://openalex.org/C153957851","wikidata":"https://www.wikidata.org/wiki/Q201448","display_name":"Transfer RNA","level":4,"score":0.8701675534248352},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7554804086685181},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6175608038902283},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.4558417499065399},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4392392039299011},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.3973856270313263},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.35003724694252014},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2569093704223633},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.14431777596473694}],"mesh":[{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012329","descriptor_name":"RNA, Bacterial","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012329","descriptor_name":"RNA, Bacterial","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012329","descriptor_name":"RNA, Bacterial","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012329","descriptor_name":"RNA, Bacterial","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012329","descriptor_name":"RNA, Bacterial","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012329","descriptor_name":"RNA, Bacterial","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D015964","descriptor_name":"Gene Expression Regulation, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015964","descriptor_name":"Gene Expression Regulation, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015964","descriptor_name":"Gene Expression Regulation, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058727","descriptor_name":"RNA, Small Untranslated","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D058727","descriptor_name":"RNA, Small Untranslated","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D058727","descriptor_name":"RNA, Small Untranslated","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D058727","descriptor_name":"RNA, Small Untranslated","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D058727","descriptor_name":"RNA, Small Untranslated","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D058727","descriptor_name":"RNA, Small Untranslated","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/nar/gkv1127","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv1127","pdf_url":"https://academic.oup.com/nar/article-pdf/44/D1/D248/16661425/gkv1127.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:26503244","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26503244","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:europepmc.org:3680734","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4702819","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.815.3112","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.815.3112","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/b9/20/gkv1127.PMC4702819.pdf","raw_type":"text"},{"id":"pmh:oai:open-archive.highwire.org:nar:44/D1/D248","is_oa":false,"landing_page_url":"http://nar.oxfordjournals.org/cgi/content/short/44/D1/D248","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"}],"best_oa_location":{"id":"doi:10.1093/nar/gkv1127","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv1127","pdf_url":"https://academic.oup.com/nar/article-pdf/44/D1/D248/16661425/gkv1127.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.41999998688697815,"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals"}],"awards":[{"id":"https://openalex.org/G2713211096","display_name":null,"funder_award_id":"81572620","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2775796746","display_name":null,"funder_award_id":"31471244","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3221976315","display_name":null,"funder_award_id":"31271404","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8220723463","display_name":null,"funder_award_id":"31071157","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1822577623.pdf","grobid_xml":"https://content.openalex.org/works/W1822577623.grobid-xml"},"referenced_works_count":34,"referenced_works":["https://openalex.org/W1966003786","https://openalex.org/W1968507670","https://openalex.org/W1992102098","https://openalex.org/W1992835987","https://openalex.org/W2005066584","https://openalex.org/W2013142360","https://openalex.org/W2042191361","https://openalex.org/W2052938279","https://openalex.org/W2063681612","https://openalex.org/W2064855802","https://openalex.org/W2074260328","https://openalex.org/W2081629469","https://openalex.org/W2091356219","https://openalex.org/W2097016050","https://openalex.org/W2104151224","https://openalex.org/W2107249189","https://openalex.org/W2108230379","https://openalex.org/W2113131574","https://openalex.org/W2113320904","https://openalex.org/W2117557320","https://openalex.org/W2118395597","https://openalex.org/W2120391797","https://openalex.org/W2121365413","https://openalex.org/W2125495884","https://openalex.org/W2131567601","https://openalex.org/W2139271133","https://openalex.org/W2142972222","https://openalex.org/W2150145676","https://openalex.org/W2150882562","https://openalex.org/W2158217645","https://openalex.org/W2160945322","https://openalex.org/W2163089209","https://openalex.org/W2169471376","https://openalex.org/W4242729757"],"related_works":["https://openalex.org/W2361861616","https://openalex.org/W2263699433","https://openalex.org/W2377979023","https://openalex.org/W2218034408","https://openalex.org/W2392921965","https://openalex.org/W2358755282","https://openalex.org/W2625833328","https://openalex.org/W1533177136","https://openalex.org/W4380994516","https://openalex.org/W2556260348"],"abstract_inverted_index":{"Bacterial":[0],"sRNAs":[1,41],"are":[2],"a":[3,39,162,172],"class":[4],"of":[5,9,38,128,165],"small":[6],"regulatory":[7,146],"RNAs":[8],"about":[10],"40-500":[11],"nt":[12],"in":[13,66,106],"length;":[14],"they":[15],"play":[16],"multiple":[17],"biological":[18],"roles":[19],"through":[20],"binding":[21,126],"to":[22,73],"their":[23],"target":[24,54,148],"mRNAs":[25],"or":[26],"proteins.":[27],"Therefore,":[28],"elucidating":[29],"sRNA":[30,47,53,145,177],"targets":[31,37,91],"is":[32],"very":[33],"important.":[34],"However,":[35],"only":[36],"few":[40],"have":[42],"been":[43],"described.":[44],"To":[45],"facilitate":[46],"functional":[48],"studies":[49],"such":[50],"as":[51,136,138],"developing":[52],"prediction":[55],"models,":[56],"we":[57],"updated":[58],"the":[59,98],"sRNATarBase":[60],"database,":[61],"which":[62],"was":[63],"initially":[64],"developed":[65],"2010.":[67],"The":[68,158],"new":[69,139,159],"version":[70,160],"(recently":[71],"moved":[72],"http://ccb1.bmi.ac.cn/srnatarbase/)":[74],"contains":[75],"771":[76,99],"sRNA-target":[77,129,167],"entries":[78],"manually":[79],"collected":[80],"from":[81,92],"213":[82],"papers,":[83],"and":[84,87,94,102,109,132,151,154,169],"23":[85],"290":[86],"11":[88],"750":[89],"predicted":[90],"sRNATarget":[93],"sTarPicker,":[95],"respectively.":[96],"Among":[97],"entries,":[100],"475":[101],"17":[103],"were":[104],"involved":[105],"validated":[107,166],"sRNA-mRNA":[108],"sRNA-protein":[110],"interactions,":[111,168],"respectively,":[112],"while":[113],"279":[114],"had":[115],"no":[116],"reported":[117],"interactions.":[118],"We":[119],"also":[120],"presented":[121],"detailed":[122],"information":[123],"for":[124,175],"316":[125],"regions":[127],"mRNA":[130],"interactions":[131],"related":[133],"mutation":[134],"experiments,":[135],"well":[137],"features,":[140],"including":[141],"NCBI":[142],"sequence":[143],"viewer,":[144],"network,":[147],"prediction-based":[149],"GO":[150],"pathway":[152],"annotations,":[153],"error":[155],"report":[156],"system.":[157],"provides":[161],"comprehensive":[163],"annotation":[164],"will":[170],"be":[171],"useful":[173],"resource":[174],"bacterial":[176],"studies.":[178]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":11},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":4}],"updated_date":"2026-06-16T07:32:37.131356","created_date":"2025-10-10T00:00:00"}
