{"id":"https://openalex.org/W1952732684","doi":"https://doi.org/10.1093/nar/gkv1117","title":"MetaNetX/MNXref \u2013 reconciliation of metabolites and biochemical reactions to bring together genome-scale metabolic networks","display_name":"MetaNetX/MNXref \u2013 reconciliation of metabolites and biochemical reactions to bring together genome-scale metabolic networks","publication_year":2015,"publication_date":"2015-11-02","ids":{"openalex":"https://openalex.org/W1952732684","doi":"https://doi.org/10.1093/nar/gkv1117","mag":"1952732684"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkv1117","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv1117","pdf_url":"https://academic.oup.com/nar/article-pdf/44/D1/D523/9482515/gkv1117.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/44/D1/D523/9482515/gkv1117.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5039131441","display_name":"S\u00e9bastien Moretti","orcid":"https://orcid.org/0000-0003-3947-488X"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I97565354","display_name":"University of Lausanne","ror":"https://ror.org/019whta54","country_code":"CH","type":"education","lineage":["https://openalex.org/I97565354"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"S\u00e9bastien Moretti","raw_affiliation_strings":["Department of Ecology and Evolution, Biophore, Evolutionary Bioinformatics group, University of Lausanne, Lausanne 1015, Switzerland","Vital-IT group, SIB Swiss Institute of Bioinformatics, Lausanne 1015, Switzerland","1Vital-IT group, SIB Swiss Institute of Bioinformatics, Lausanne 1015, Switzerland","2Department of Ecology and Evolution, Biophore, Evolutionary Bioinformatics group, University of Lausanne, Lausanne 1015, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Ecology and Evolution, Biophore, Evolutionary Bioinformatics group, University of Lausanne, Lausanne 1015, Switzerland","institution_ids":["https://openalex.org/I97565354"]},{"raw_affiliation_string":"Vital-IT group, SIB Swiss Institute of Bioinformatics, Lausanne 1015, Switzerland","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"1Vital-IT group, SIB Swiss Institute of Bioinformatics, Lausanne 1015, Switzerland","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"2Department of Ecology and Evolution, Biophore, Evolutionary Bioinformatics group, University of Lausanne, Lausanne 1015, Switzerland","institution_ids":["https://openalex.org/I97565354"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005002059","display_name":"Olivier Martin","orcid":"https://orcid.org/0000-0002-5295-5963"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Olivier Martin","raw_affiliation_strings":["Vital-IT group, SIB Swiss Institute of Bioinformatics, Lausanne 1015, Switzerland","Vital-IT Group, SIB Swiss Institute of Bioinformatics, Lausanne, 1015, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Vital-IT group, SIB Swiss Institute of Bioinformatics, Lausanne 1015, Switzerland","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"Vital-IT Group, SIB Swiss Institute of Bioinformatics, Lausanne, 1015, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103423371","display_name":"Van Du T. Tran","orcid":"https://orcid.org/0000-0003-2074-5029"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"T. Van\u00a0Du\u00a0Tran","raw_affiliation_strings":["Vital-IT group, SIB Swiss Institute of Bioinformatics, Lausanne 1015, Switzerland","Vital-IT Group, SIB Swiss Institute of Bioinformatics, Lausanne, 1015, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Vital-IT group, SIB Swiss Institute of Bioinformatics, Lausanne 1015, Switzerland","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"Vital-IT Group, SIB Swiss Institute of Bioinformatics, Lausanne, 1015, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090916579","display_name":"Alan Bridge","orcid":"https://orcid.org/0000-0003-2148-9135"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Alan Bridge","raw_affiliation_strings":["Swiss-Prot Group, SIB Swiss Institute of Bioinformatics, Geneva 1206, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Swiss-Prot Group, SIB Swiss Institute of Bioinformatics, Geneva 1206, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091324355","display_name":"Anne Morgat","orcid":"https://orcid.org/0000-0002-1216-2969"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en sciences et technologies du num\u00e9rique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"government","lineage":["https://openalex.org/I1326498283"]},{"id":"https://openalex.org/I4210101348","display_name":"Centre Inria de l'Universit\u00e9 Grenoble Alpes","ror":"https://ror.org/00n8d6z93","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1326498283","https://openalex.org/I4210101348"]}],"countries":["CH","FR"],"is_corresponding":false,"raw_author_name":"Anne Morgat","raw_affiliation_strings":["Equipe ERABLE, INRIA Grenoble Rh\u00f4ne-Alpes, Montbonnot Saint-Martin 38330, France","Swiss-Prot Group, SIB Swiss Institute of Bioinformatics, Geneva 1206, Switzerland","4Equipe ERABLE, INRIA Grenoble Rh\u00f4ne-Alpes, Montbonnot Saint-Martin 38330, France","3Swiss-Prot Group, SIB Swiss Institute of Bioinformatics, Geneva 1206, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Equipe ERABLE, INRIA Grenoble Rh\u00f4ne-Alpes, Montbonnot Saint-Martin 38330, France","institution_ids":["https://openalex.org/I4210101348","https://openalex.org/I1326498283"]},{"raw_affiliation_string":"Swiss-Prot Group, SIB Swiss Institute of Bioinformatics, Geneva 1206, Switzerland","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"4Equipe ERABLE, INRIA Grenoble Rh\u00f4ne-Alpes, Montbonnot Saint-Martin 38330, France","institution_ids":["https://openalex.org/I1326498283"]},{"raw_affiliation_string":"3Swiss-Prot Group, SIB Swiss Institute of Bioinformatics, Geneva 1206, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5006006798","display_name":"Marco Pagni","orcid":"https://orcid.org/0000-0001-9292-9463"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Marco Pagni","raw_affiliation_strings":["Vital-IT group, SIB Swiss Institute of Bioinformatics, Lausanne 1015, Switzerland,","1Vital-IT group, SIB Swiss Institute of Bioinformatics, Lausanne 1015, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Vital-IT group, SIB Swiss Institute of Bioinformatics, Lausanne 1015, Switzerland,","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"1Vital-IT group, SIB Swiss Institute of Bioinformatics, Lausanne 1015, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":7.0789,"has_fulltext":true,"cited_by_count":185,"citation_normalized_percentile":{"value":0.97673288,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"44","issue":"D1","first_page":"D523","last_page":"D526"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9861999750137329,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10404","display_name":"Enzyme Catalysis and Immobilization","score":0.98580002784729,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8894603848457336},{"id":"https://openalex.org/keywords/namespace","display_name":"Namespace","score":0.798599123954773},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.6095452904701233},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6085067987442017},{"id":"https://openalex.org/keywords/metabolic-network","display_name":"Metabolic network","score":0.5787048935890198},{"id":"https://openalex.org/keywords/variety","display_name":"Variety (cybernetics)","score":0.4999673366546631},{"id":"https://openalex.org/keywords/scale","display_name":"Scale (ratio)","score":0.4846497178077698},{"id":"https://openalex.org/keywords/flux","display_name":"Flux (metallurgy)","score":0.44699326157569885},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3420863151550293},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.28163033723831177},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.1900222897529602},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.16913995146751404},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.16710543632507324}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8894603848457336},{"id":"https://openalex.org/C2778383056","wikidata":"https://www.wikidata.org/wiki/Q873636","display_name":"Namespace","level":2,"score":0.798599123954773},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6095452904701233},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6085067987442017},{"id":"https://openalex.org/C101810790","wikidata":"https://www.wikidata.org/wiki/Q2263094","display_name":"Metabolic network","level":2,"score":0.5787048935890198},{"id":"https://openalex.org/C136197465","wikidata":"https://www.wikidata.org/wiki/Q1729295","display_name":"Variety (cybernetics)","level":2,"score":0.4999673366546631},{"id":"https://openalex.org/C2778755073","wikidata":"https://www.wikidata.org/wiki/Q10858537","display_name":"Scale (ratio)","level":2,"score":0.4846497178077698},{"id":"https://openalex.org/C68709404","wikidata":"https://www.wikidata.org/wiki/Q1134475","display_name":"Flux (metallurgy)","level":2,"score":0.44699326157569885},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3420863151550293},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.28163033723831177},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1900222897529602},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.16913995146751404},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.16710543632507324},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C191897082","wikidata":"https://www.wikidata.org/wiki/Q11467","display_name":"Metallurgy","level":1,"score":0.0},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.1093/nar/gkv1117","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv1117","pdf_url":"https://academic.oup.com/nar/article-pdf/44/D1/D523/9482515/gkv1117.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmh:oai:serval.unil.ch:BIB_58AEB83D57CC","is_oa":true,"landing_page_url":"https://serval.unil.ch/notice/serval:BIB_58AEB83D57CC","pdf_url":null,"source":{"id":"https://openalex.org/S4306401797","display_name":"SERVAL (Universit\u00e9 de Lausanne)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210093590","host_organization_name":"Swiss School of Archaeology in Greece","host_organization_lineage":["https://openalex.org/I4210093590"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research, vol. 44, no. D1, pp. D523-D526","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:iris.unil.ch:iris/50580","is_oa":true,"landing_page_url":"https://iris.unil.ch/handle/iris/50580","pdf_url":"https://iris.unil.ch/bitstreams/c19de50a-a20d-433e-8e3a-79af881f7d1a/download","source":{"id":"https://openalex.org/S7407055444","display_name":"IRIS","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"journal article"},{"id":"pmh:oai:europepmc.org:3680728","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4702813","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:open-archive.highwire.org:nar:44/D1/D523","is_oa":false,"landing_page_url":"http://nar.oxfordjournals.org/cgi/content/short/44/D1/D523","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"}],"best_oa_location":{"id":"doi:10.1093/nar/gkv1117","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv1117","pdf_url":"https://academic.oup.com/nar/article-pdf/44/D1/D523/9482515/gkv1117.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320315885","display_name":"Australian Government","ror":"https://ror.org/0314h5y94"},{"id":"https://openalex.org/F4320320924","display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung","ror":"https://ror.org/00yjd3n13"},{"id":"https://openalex.org/F4320331322","display_name":"Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1952732684.pdf","grobid_xml":"https://content.openalex.org/works/W1952732684.grobid-xml"},"referenced_works_count":28,"referenced_works":["https://openalex.org/W1899261287","https://openalex.org/W1968324131","https://openalex.org/W1985512202","https://openalex.org/W1989277387","https://openalex.org/W2004548026","https://openalex.org/W2044935306","https://openalex.org/W2046123617","https://openalex.org/W2063028213","https://openalex.org/W2068526246","https://openalex.org/W2075283200","https://openalex.org/W2100084634","https://openalex.org/W2109138480","https://openalex.org/W2111796963","https://openalex.org/W2117306286","https://openalex.org/W2121249519","https://openalex.org/W2124419982","https://openalex.org/W2128601422","https://openalex.org/W2131848047","https://openalex.org/W2140611297","https://openalex.org/W2142428670","https://openalex.org/W2165373392","https://openalex.org/W2166138679","https://openalex.org/W2167539386","https://openalex.org/W2168465568","https://openalex.org/W2739999456","https://openalex.org/W4230770774","https://openalex.org/W4237335579","https://openalex.org/W6639819712"],"related_works":["https://openalex.org/W2370740425","https://openalex.org/W4233446872","https://openalex.org/W2295002787","https://openalex.org/W3017834062","https://openalex.org/W4205941804","https://openalex.org/W2142058655","https://openalex.org/W1999460937","https://openalex.org/W2164290927","https://openalex.org/W2150313298","https://openalex.org/W4309550442"],"abstract_inverted_index":{"MetaNetX":[0,78],"is":[1],"a":[2,13,20,44],"repository":[3],"of":[4,15,23,46],"genome-scale":[5],"metabolic":[6],"networks":[7],"(GSMNs)":[8],"and":[9,62,71,77,82],"biochemical":[10],"pathways":[11],"from":[12],"number":[14],"major":[16],"resources":[17],"imported":[18],"into":[19],"common":[21],"namespace":[22],"chemical":[24],"compounds,":[25],"reactions,":[26],"cellular":[27],"compartments\u2014namely":[28],"MNXref\u2014and":[29],"proteins.":[30],"The":[31],"MetaNetX.org":[32],"website":[33],"(http://www.metanetx.org/)":[34],"provides":[35],"access":[36],"to":[37,51,58],"these":[38],"integrated":[39],"data":[40],"as":[41,43],"well":[42],"variety":[45],"tools":[47],"that":[48],"allow":[49],"users":[50],"import":[52],"their":[53],"own":[54],"GSMNs,":[55],"map":[56],"them":[57],"the":[59,73],"MNXref":[60,76],"reconciliation,":[61],"manipulate,":[63],"compare,":[64],"analyze,":[65],"simulate":[66],"(using":[67],"flux":[68],"balance":[69],"analysis)":[70],"export":[72],"resulting":[74],"GSMNs.":[75],"are":[79],"regularly":[80],"updated":[81],"freely":[83],"available.":[84]},"counts_by_year":[{"year":2026,"cited_by_count":11},{"year":2025,"cited_by_count":11},{"year":2024,"cited_by_count":8},{"year":2023,"cited_by_count":9},{"year":2022,"cited_by_count":14},{"year":2021,"cited_by_count":21},{"year":2020,"cited_by_count":25},{"year":2019,"cited_by_count":38},{"year":2018,"cited_by_count":24},{"year":2017,"cited_by_count":19},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
