{"id":"https://openalex.org/W2145374174","doi":"https://doi.org/10.1093/nar/gkv1116","title":"Tools and data services registry: a community effort to document bioinformatics resources","display_name":"Tools and data services registry: a community effort to document bioinformatics resources","publication_year":2015,"publication_date":"2015-11-03","ids":{"openalex":"https://openalex.org/W2145374174","doi":"https://doi.org/10.1093/nar/gkv1116","mag":"2145374174","pmid":"https://pubmed.ncbi.nlm.nih.gov/26538599"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkv1116","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv1116","pdf_url":"https://academic.oup.com/nar/article-pdf/44/D1/D38/9482499/gkv1116.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/44/D1/D38/9482499/gkv1116.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5080837511","display_name":"Jon Ison","orcid":"https://orcid.org/0000-0001-6666-1520"},"institutions":[{"id":"https://openalex.org/I96673099","display_name":"Technical University of Denmark","ror":"https://ror.org/04qtj9h94","country_code":"DK","type":"education","lineage":["https://openalex.org/I96673099"]}],"countries":["DK"],"is_corresponding":true,"raw_author_name":"Jon Ison","raw_affiliation_strings":["Center for Biological Sequence Analysis Department of Systems Biology, Technical University of Denmark, Denmark jison@cbs.dtu.dk","Center for Biological Sequence Analysis Department of Systems Biology, Technical University of Denmark, Denmark"],"affiliations":[{"raw_affiliation_string":"Center for Biological Sequence Analysis Department of Systems Biology, Technical University of Denmark, Denmark jison@cbs.dtu.dk","institution_ids":[]},{"raw_affiliation_string":"Center for Biological Sequence Analysis Department of Systems Biology, Technical University of Denmark, Denmark","institution_ids":["https://openalex.org/I96673099"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016909243","display_name":"Kristoffer Rapacki","orcid":null},"institutions":[{"id":"https://openalex.org/I96673099","display_name":"Technical University of Denmark","ror":"https://ror.org/04qtj9h94","country_code":"DK","type":"education","lineage":["https://openalex.org/I96673099"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Kristoffer Rapacki","raw_affiliation_strings":["Center for Biological Sequence Analysis Department of Systems Biology, Technical University of Denmark, Denmark"],"affiliations":[{"raw_affiliation_string":"Center for Biological Sequence Analysis Department of Systems Biology, Technical University of Denmark, Denmark","institution_ids":["https://openalex.org/I96673099"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057666741","display_name":"Herv\u00e9 M\u00e9nager","orcid":"https://orcid.org/0000-0002-7552-1009"},"institutions":[{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Herv\u00e9 M\u00e9nager","raw_affiliation_strings":["Centre d'Informatique pour la Biologie, C3BI, Institut Pasteur, France"],"affiliations":[{"raw_affiliation_string":"Centre d'Informatique pour la Biologie, C3BI, Institut Pasteur, France","institution_ids":["https://openalex.org/I157536573"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007975575","display_name":"Mat\u00fa\u0161 Kala\u0161","orcid":"https://orcid.org/0000-0002-1509-4981"},"institutions":[{"id":"https://openalex.org/I4432739","display_name":"University of Bergen","ror":"https://ror.org/03zga2b32","country_code":"NO","type":"education","lineage":["https://openalex.org/I4432739"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Mat\u00fa\u0161 Kala\u0161","raw_affiliation_strings":["Computational Biology Unit, Department of Informatics, University of Bergen, Norway"],"affiliations":[{"raw_affiliation_string":"Computational Biology Unit, Department of Informatics, University of Bergen, Norway","institution_ids":["https://openalex.org/I4432739"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014632251","display_name":"Emil Rydza","orcid":null},"institutions":[{"id":"https://openalex.org/I96673099","display_name":"Technical University of Denmark","ror":"https://ror.org/04qtj9h94","country_code":"DK","type":"education","lineage":["https://openalex.org/I96673099"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Emil Rydza","raw_affiliation_strings":["Center for Biological Sequence Analysis Department of Systems Biology, Technical University of Denmark, Denmark"],"affiliations":[{"raw_affiliation_string":"Center for Biological Sequence Analysis Department of Systems Biology, Technical University of Denmark, Denmark","institution_ids":["https://openalex.org/I96673099"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034787008","display_name":"Piotr Jaroslaw Chmura","orcid":"https://orcid.org/0000-0002-9371-6918"},"institutions":[{"id":"https://openalex.org/I96673099","display_name":"Technical University of Denmark","ror":"https://ror.org/04qtj9h94","country_code":"DK","type":"education","lineage":["https://openalex.org/I96673099"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Piotr Chmura","raw_affiliation_strings":["Center for Biological Sequence Analysis Department of Systems Biology, Technical University of Denmark, Denmark"],"affiliations":[{"raw_affiliation_string":"Center for Biological Sequence Analysis Department of Systems Biology, Technical University of Denmark, Denmark","institution_ids":["https://openalex.org/I96673099"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043694304","display_name":"Christian Anthon","orcid":"https://orcid.org/0000-0002-4336-1688"},"institutions":[{"id":"https://openalex.org/I124055696","display_name":"University of Copenhagen","ror":"https://ror.org/035b05819","country_code":"DK","type":"education","lineage":["https://openalex.org/I124055696"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Christian Anthon","raw_affiliation_strings":["Department of Veterinary Clinical and Animal Sciences, Faculty for Health and Medical Sciences, University of Copenhagen, Denmark"],"affiliations":[{"raw_affiliation_string":"Department of Veterinary Clinical and Animal Sciences, Faculty for Health and Medical Sciences, University of Copenhagen, Denmark","institution_ids":["https://openalex.org/I124055696"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067580376","display_name":"Niall Beard","orcid":"https://orcid.org/0000-0002-2627-0231"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Niall Beard","raw_affiliation_strings":["School of Computer Science, University of Manchester, UK"],"affiliations":[{"raw_affiliation_string":"School of Computer Science, University of Manchester, UK","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049457524","display_name":"Karel Berka","orcid":"https://orcid.org/0000-0001-9472-2589"},"institutions":[{"id":"https://openalex.org/I70703428","display_name":"Palack\u00fd University Olomouc","ror":"https://ror.org/04qxnmv42","country_code":"CZ","type":"education","lineage":["https://openalex.org/I70703428"]}],"countries":["CZ"],"is_corresponding":false,"raw_author_name":"Karel Berka","raw_affiliation_strings":["Department of Physical Chemistry, RCPTM, Faculty of Science, Palacky University, Czech Republic"],"affiliations":[{"raw_affiliation_string":"Department of Physical Chemistry, RCPTM, Faculty of Science, Palacky University, Czech Republic","institution_ids":["https://openalex.org/I70703428"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005347238","display_name":"Dan Bolser","orcid":"https://orcid.org/0000-0002-3991-0859"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Dan Bolser","raw_affiliation_strings":["The European Bioinformatics Institute (EMBL-EBI), UK"],"affiliations":[{"raw_affiliation_string":"The European Bioinformatics Institute (EMBL-EBI), UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060841909","display_name":"Tim Booth","orcid":"https://orcid.org/0000-0003-2470-9519"},"institutions":[{"id":"https://openalex.org/I4210092773","display_name":"UK Centre for Ecology & Hydrology","ror":"https://ror.org/00pggkr55","country_code":"GB","type":"other","lineage":["https://openalex.org/I4210092773"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Tim Booth","raw_affiliation_strings":["NEBC Wallingford, Centre for Ecology and Hydrology, UK"],"affiliations":[{"raw_affiliation_string":"NEBC Wallingford, Centre for Ecology and Hydrology, UK","institution_ids":["https://openalex.org/I4210092773"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003706908","display_name":"Anthony Bretaudeau","orcid":"https://orcid.org/0000-0003-0914-2470"},"institutions":[{"id":"https://openalex.org/I4210141755","display_name":"Institut de G\u00e9n\u00e9tique, Environnement et Protection des Plantes","ror":"https://ror.org/038kxsm48","country_code":"FR","type":"facility","lineage":["https://openalex.org/I2800285241","https://openalex.org/I4210088668","https://openalex.org/I4210117091","https://openalex.org/I4210141755","https://openalex.org/I4399657933","https://openalex.org/I56067802"]},{"id":"https://openalex.org/I2802519937","display_name":"Institut de Recherche en Informatique et Syst\u00e8mes Al\u00e9atoires","ror":"https://ror.org/00myn0z94","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I205703379","https://openalex.org/I2802204017","https://openalex.org/I2802519937","https://openalex.org/I28221208","https://openalex.org/I4210127572","https://openalex.org/I4210159245","https://openalex.org/I56067802"]},{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en sciences et technologies du num\u00e9rique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"government","lineage":["https://openalex.org/I1326498283"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Anthony Bretaudeau","raw_affiliation_strings":["INRA, UMR Institut de G\u00e9n\u00e9tique, Environnement et Protection des Plantes (IGEPP), BioInformatics Platform for Agroecosystems Arthropods (BIPAA), France INRIA, IRISA, GenOuest Core Facility, France","INRIA, IRISA, GenOuest Core Facility, France","INRA, UMR Institut de G\u00e9n\u00e9tique, Environnement et Protection des Plantes (IGEPP), BioInformatics Platform for Agroecosystems Arthropods (BIPAA), France"],"affiliations":[{"raw_affiliation_string":"INRA, UMR Institut de G\u00e9n\u00e9tique, Environnement et Protection des Plantes (IGEPP), BioInformatics Platform for Agroecosystems Arthropods (BIPAA), France INRIA, IRISA, GenOuest Core Facility, France","institution_ids":[]},{"raw_affiliation_string":"INRIA, IRISA, GenOuest Core Facility, France","institution_ids":["https://openalex.org/I1326498283","https://openalex.org/I2802519937"]},{"raw_affiliation_string":"INRA, UMR Institut de G\u00e9n\u00e9tique, Environnement et Protection des Plantes (IGEPP), BioInformatics Platform for Agroecosystems Arthropods (BIPAA), France","institution_ids":["https://openalex.org/I4210141755"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000513864","display_name":"Jan Brezovsk\u00fd","orcid":"https://orcid.org/0000-0001-9677-5078"},"institutions":[{"id":"https://openalex.org/I4210113999","display_name":"RECETOX","ror":"https://ror.org/032hzqh22","country_code":"CZ","type":"facility","lineage":["https://openalex.org/I21449261","https://openalex.org/I4210113999"]},{"id":"https://openalex.org/I21449261","display_name":"Masaryk University","ror":"https://ror.org/02j46qs45","country_code":"CZ","type":"education","lineage":["https://openalex.org/I21449261"]}],"countries":["CZ"],"is_corresponding":false,"raw_author_name":"Jan Brezovsky","raw_affiliation_strings":["Loschmidt Laboratories, Department of Experimental Biology and Research Centre for Toxic Compounds in the Environment RECETOX, Masaryk University, Czech Republic"],"affiliations":[{"raw_affiliation_string":"Loschmidt Laboratories, Department of Experimental Biology and Research Centre for Toxic Compounds in the Environment RECETOX, Masaryk University, Czech Republic","institution_ids":["https://openalex.org/I4210113999","https://openalex.org/I21449261"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053410790","display_name":"Rita Casadio","orcid":"https://orcid.org/0000-0002-7462-7039"},"institutions":[{"id":"https://openalex.org/I9360294","display_name":"University of Bologna","ror":"https://ror.org/01111rn36","country_code":"IT","type":"education","lineage":["https://openalex.org/I9360294"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Rita Casadio","raw_affiliation_strings":["Bologna Biocomputing Group, University of Bologna, Italy"],"affiliations":[{"raw_affiliation_string":"Bologna Biocomputing Group, University of Bologna, Italy","institution_ids":["https://openalex.org/I9360294"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029338279","display_name":"Gianni Cesareni","orcid":"https://orcid.org/0000-0002-9528-6018"},"institutions":[{"id":"https://openalex.org/I116067653","display_name":"University of Rome Tor Vergata","ror":"https://ror.org/02p77k626","country_code":"IT","type":"education","lineage":["https://openalex.org/I116067653"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Gianni Cesareni","raw_affiliation_strings":["Dept. of Biology, University of Rome Tor Vergata, Italy"],"affiliations":[{"raw_affiliation_string":"Dept. of Biology, University of Rome Tor Vergata, Italy","institution_ids":["https://openalex.org/I116067653"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034617878","display_name":"Frederik Coppens","orcid":"https://orcid.org/0000-0001-6565-5145"},"institutions":[{"id":"https://openalex.org/I4210098178","display_name":"VIB-UGent Center for Plant Systems Biology","ror":"https://ror.org/01qnqmc89","country_code":"BE","type":"facility","lineage":["https://openalex.org/I2802017950","https://openalex.org/I32597200","https://openalex.org/I4210098178"]},{"id":"https://openalex.org/I32597200","display_name":"Ghent University","ror":"https://ror.org/00cv9y106","country_code":"BE","type":"education","lineage":["https://openalex.org/I32597200"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Frederik Coppens","raw_affiliation_strings":["Department of Plant Systems Biology, VIB, Belgium Department of Plant Biotechnology and Bioinformatics, Ghent University, Belgium","Department of Plant Systems Biology, VIB, Belgium","Department of Plant Biotechnology and Bioinformatics, Ghent University, Belgium"],"affiliations":[{"raw_affiliation_string":"Department of Plant Systems Biology, VIB, Belgium Department of Plant Biotechnology and Bioinformatics, Ghent University, Belgium","institution_ids":[]},{"raw_affiliation_string":"Department of Plant Systems Biology, VIB, Belgium","institution_ids":["https://openalex.org/I4210098178"]},{"raw_affiliation_string":"Department of Plant Biotechnology and Bioinformatics, Ghent University, Belgium","institution_ids":["https://openalex.org/I32597200"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111928252","display_name":"Michael Cornell","orcid":null},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Michael Cornell","raw_affiliation_strings":["Faculty of Life Sciences, University of Manchester, UK"],"affiliations":[{"raw_affiliation_string":"Faculty of Life Sciences, University of Manchester, UK","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086775972","display_name":"Gianmauro Cuccuru","orcid":"https://orcid.org/0000-0002-5335-545X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Gianmauro Cuccuru","raw_affiliation_strings":["Bioinformatics, CRS4, Italy"],"affiliations":[{"raw_affiliation_string":"Bioinformatics, CRS4, Italy","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044875949","display_name":"Kristian Davidsen","orcid":"https://orcid.org/0000-0002-3821-6902"},"institutions":[{"id":"https://openalex.org/I96673099","display_name":"Technical University of Denmark","ror":"https://ror.org/04qtj9h94","country_code":"DK","type":"education","lineage":["https://openalex.org/I96673099"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Kristian Davidsen","raw_affiliation_strings":["Center for Biological Sequence Analysis Department of Systems Biology, Technical University of Denmark, Denmark"],"affiliations":[{"raw_affiliation_string":"Center for Biological Sequence Analysis Department of Systems Biology, Technical University of Denmark, Denmark","institution_ids":["https://openalex.org/I96673099"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059679442","display_name":"Gianluca Della Vedova","orcid":"https://orcid.org/0000-0001-5584-3089"},"institutions":[{"id":"https://openalex.org/I66752286","display_name":"University of Milano-Bicocca","ror":"https://ror.org/01ynf4891","country_code":"IT","type":"education","lineage":["https://openalex.org/I66752286"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Gianluca Della Vedova","raw_affiliation_strings":["Dept. of Computer Science, Systems and Communication. Univ. Milano-Bicocca, Italy"],"affiliations":[{"raw_affiliation_string":"Dept. of Computer Science, Systems and Communication. Univ. Milano-Bicocca, Italy","institution_ids":["https://openalex.org/I66752286"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003981652","display_name":"Tunca Do\u011fan","orcid":"https://orcid.org/0000-0002-1298-9763"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Tunca Dogan","raw_affiliation_strings":["UniProt, European Bioinformatics Institute (EMBL-EBI), UK"],"affiliations":[{"raw_affiliation_string":"UniProt, European Bioinformatics Institute (EMBL-EBI), UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004627077","display_name":"Olivia Doppelt\u2010Azeroual","orcid":"https://orcid.org/0000-0001-5451-5171"},"institutions":[{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Olivia Doppelt-Azeroual","raw_affiliation_strings":["Centre d'Informatique pour la Biologie, C3BI, Institut Pasteur, France"],"affiliations":[{"raw_affiliation_string":"Centre d'Informatique pour la Biologie, C3BI, Institut Pasteur, France","institution_ids":["https://openalex.org/I157536573"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073917651","display_name":"Laura R. Emery","orcid":"https://orcid.org/0000-0002-9321-4854"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Laura Emery","raw_affiliation_strings":["The European Bioinformatics Institute (EMBL-EBI), UK"],"affiliations":[{"raw_affiliation_string":"The European Bioinformatics Institute (EMBL-EBI), UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051386555","display_name":"Elisabeth Gasteiger","orcid":"https://orcid.org/0000-0003-1829-162X"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Elisabeth Gasteiger","raw_affiliation_strings":["SIB Swiss Institute of Bioinformatics, Switzerland"],"affiliations":[{"raw_affiliation_string":"SIB Swiss Institute of Bioinformatics, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019415803","display_name":"Thomas Gatter","orcid":"https://orcid.org/0000-0001-5567-3016"},"institutions":[{"id":"https://openalex.org/I20121455","display_name":"Bielefeld University","ror":"https://ror.org/02hpadn98","country_code":"DE","type":"education","lineage":["https://openalex.org/I20121455"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Thomas Gatter","raw_affiliation_strings":["Faculty of Technology and Center for Biotechnology, Universit\u00e4t Bielefeld, Germany"],"affiliations":[{"raw_affiliation_string":"Faculty of Technology and Center for Biotechnology, Universit\u00e4t Bielefeld, Germany","institution_ids":["https://openalex.org/I20121455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108748492","display_name":"Tatyana Goldberg","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Tatyana Goldberg","raw_affiliation_strings":["Department of Informatics, Bioinformatics-I12, TUM, Germany"],"affiliations":[{"raw_affiliation_string":"Department of Informatics, Bioinformatics-I12, TUM, Germany","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055883517","display_name":"Marie Grosjean","orcid":"https://orcid.org/0000-0002-2685-8078"},"institutions":[{"id":"https://openalex.org/I4210138994","display_name":"Institut Fran\u00e7ais de Bioinformatique","ror":"https://ror.org/045f7pv37","country_code":"FR","type":"facility","lineage":["https://openalex.org/I4210138994"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Marie Grosjean","raw_affiliation_strings":["Institut Fran\u00e7ais de Bioinformatique (French Institute of Bioinformatics), CNRS, UMS3601, France"],"affiliations":[{"raw_affiliation_string":"Institut Fran\u00e7ais de Bioinformatique (French Institute of Bioinformatics), CNRS, UMS3601, France","institution_ids":["https://openalex.org/I4210138994","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006559585","display_name":"Bj\u00f6rn Gr\u00fcning","orcid":"https://orcid.org/0000-0002-3079-6586"},"institutions":[{"id":"https://openalex.org/I161046081","display_name":"University of Freiburg","ror":"https://ror.org/0245cg223","country_code":"DE","type":"education","lineage":["https://openalex.org/I161046081"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Bj\u00f6rn Gr\u00fcning","raw_affiliation_strings":["Albert-Ludwigs-Universit\u00e4t Freiburg, Fahnenbergplatz, 79085 Freiburg"],"affiliations":[{"raw_affiliation_string":"Albert-Ludwigs-Universit\u00e4t Freiburg, Fahnenbergplatz, 79085 Freiburg","institution_ids":["https://openalex.org/I161046081"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089562631","display_name":"Manuela Helmer\u2010Citterich","orcid":"https://orcid.org/0000-0001-9530-7504"},"institutions":[{"id":"https://openalex.org/I116067653","display_name":"University of Rome Tor Vergata","ror":"https://ror.org/02p77k626","country_code":"IT","type":"education","lineage":["https://openalex.org/I116067653"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Manuela Helmer-Citterich","raw_affiliation_strings":["Centre for Molecular Bioinformatics, Dept. of Biology, University of Rome Tor Vergata, Italy"],"affiliations":[{"raw_affiliation_string":"Centre for Molecular Bioinformatics, Dept. of Biology, University of Rome Tor Vergata, Italy","institution_ids":["https://openalex.org/I116067653"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109239162","display_name":"Hans Ienasescu","orcid":null},"institutions":[{"id":"https://openalex.org/I124055696","display_name":"University of Copenhagen","ror":"https://ror.org/035b05819","country_code":"DK","type":"education","lineage":["https://openalex.org/I124055696"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Hans Ienasescu","raw_affiliation_strings":["Bioinformatics Centre, Department of Biology, University of Copenhagen, Denmark"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Centre, Department of Biology, University of Copenhagen, Denmark","institution_ids":["https://openalex.org/I124055696"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063271595","display_name":"Vassilios Ioannidis","orcid":"https://orcid.org/0000-0002-4209-2578"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Vassilios Ioannidis","raw_affiliation_strings":["SIB Swiss Institute of Bioinformatics, Switzerland"],"affiliations":[{"raw_affiliation_string":"SIB Swiss Institute of Bioinformatics, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068506714","display_name":"Martin Closter Jespersen","orcid":null},"institutions":[{"id":"https://openalex.org/I96673099","display_name":"Technical University of Denmark","ror":"https://ror.org/04qtj9h94","country_code":"DK","type":"education","lineage":["https://openalex.org/I96673099"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Martin Closter Jespersen","raw_affiliation_strings":["Center for Biological Sequence Analysis Department of Systems Biology, Technical University of Denmark, Denmark"],"affiliations":[{"raw_affiliation_string":"Center for Biological Sequence Analysis Department of Systems Biology, Technical University of Denmark, Denmark","institution_ids":["https://openalex.org/I96673099"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056920611","display_name":"Rafael C. Jim\u00e9nez","orcid":"https://orcid.org/0000-0001-5404-7670"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Rafael Jimenez","raw_affiliation_strings":["The European Bioinformatics Institute (EMBL-EBI), UK"],"affiliations":[{"raw_affiliation_string":"The European Bioinformatics Institute (EMBL-EBI), UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057780150","display_name":"Nick Juty","orcid":"https://orcid.org/0000-0002-2036-8350"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Nick Juty","raw_affiliation_strings":["The European Bioinformatics Institute (EMBL-EBI), UK"],"affiliations":[{"raw_affiliation_string":"The European Bioinformatics Institute (EMBL-EBI), UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037192671","display_name":"Peter Juvan","orcid":"https://orcid.org/0000-0003-2873-5247"},"institutions":[{"id":"https://openalex.org/I153976015","display_name":"University of Ljubljana","ror":"https://ror.org/05njb9z20","country_code":"SI","type":"education","lineage":["https://openalex.org/I153976015"]}],"countries":["SI"],"is_corresponding":false,"raw_author_name":"Peter Juvan","raw_affiliation_strings":["Centre for Functional Genomics and Biochips, Faculty of Medicine, University of Ljubljana, Slovenia"],"affiliations":[{"raw_affiliation_string":"Centre for Functional Genomics and Biochips, Faculty of Medicine, University of Ljubljana, Slovenia","institution_ids":["https://openalex.org/I153976015"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102018281","display_name":"M. H. J. Koch","orcid":"https://orcid.org/0000-0003-0865-9590"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Maximilian Koch","raw_affiliation_strings":["The European Bioinformatics Institute (EMBL-EBI), UK"],"affiliations":[{"raw_affiliation_string":"The European Bioinformatics Institute (EMBL-EBI), UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062892160","display_name":"Camille Laibe","orcid":"https://orcid.org/0000-0002-4625-743X"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Camille Laibe","raw_affiliation_strings":["The European Bioinformatics Institute (EMBL-EBI), UK"],"affiliations":[{"raw_affiliation_string":"The European Bioinformatics Institute (EMBL-EBI), UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100410871","display_name":"Jing\u2010Woei Li","orcid":"https://orcid.org/0000-0001-6167-7689"},"institutions":[{"id":"https://openalex.org/I177725633","display_name":"Chinese University of Hong Kong","ror":"https://ror.org/00t33hh48","country_code":"HK","type":"education","lineage":["https://openalex.org/I177725633"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Jing-Woei Li","raw_affiliation_strings":["Faculty of Medicine, The Chinese University of Hong Kong, China Hong Kong Bioinformatics Centre, School of Life Sciences,The Chinese University of Hong Kong, China","Faculty of Medicine, The Chinese University of Hong Kong, China","Hong Kong Bioinformatics Centre, School of Life Sciences,The Chinese University of Hong Kong, China"],"affiliations":[{"raw_affiliation_string":"Faculty of Medicine, The Chinese University of Hong Kong, China Hong Kong Bioinformatics Centre, School of Life Sciences,The Chinese University of Hong Kong, China","institution_ids":[]},{"raw_affiliation_string":"Faculty of Medicine, The Chinese University of Hong Kong, China","institution_ids":["https://openalex.org/I177725633"]},{"raw_affiliation_string":"Hong Kong Bioinformatics Centre, School of Life Sciences,The Chinese University of Hong Kong, China","institution_ids":["https://openalex.org/I177725633"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047929947","display_name":"Luana Licata","orcid":"https://orcid.org/0000-0001-5084-9000"},"institutions":[{"id":"https://openalex.org/I116067653","display_name":"University of Rome Tor Vergata","ror":"https://ror.org/02p77k626","country_code":"IT","type":"education","lineage":["https://openalex.org/I116067653"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Luana Licata","raw_affiliation_strings":["Dept. of Biology, University of Rome Tor Vergata, Italy"],"affiliations":[{"raw_affiliation_string":"Dept. of Biology, University of Rome Tor Vergata, Italy","institution_ids":["https://openalex.org/I116067653"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091794640","display_name":"Fabien Mareuil","orcid":"https://orcid.org/0000-0002-3832-9157"},"institutions":[{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Fabien Mareuil","raw_affiliation_strings":["Centre d'Informatique pour la Biologie, C3BI, Institut Pasteur, France"],"affiliations":[{"raw_affiliation_string":"Centre d'Informatique pour la Biologie, C3BI, Institut Pasteur, France","institution_ids":["https://openalex.org/I157536573"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014042889","display_name":"Ivan Mi\u010deti\u0107","orcid":"https://orcid.org/0000-0003-1691-8425"},"institutions":[{"id":"https://openalex.org/I138689650","display_name":"University of Padua","ror":"https://ror.org/00240q980","country_code":"IT","type":"education","lineage":["https://openalex.org/I138689650"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Ivan Mi\u010deti\u0107","raw_affiliation_strings":["Department of Biomedical Sciences, University of Padua, Italy"],"affiliations":[{"raw_affiliation_string":"Department of Biomedical Sciences, University of Padua, Italy","institution_ids":["https://openalex.org/I138689650"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029669276","display_name":"Rune M\u00f8llegaard Friborg","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Rune M\u00f8llegaard Friborg","raw_affiliation_strings":["Bioinformatics Research Centre (BiRC), Denmark"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Research Centre (BiRC), Denmark","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039131441","display_name":"S\u00e9bastien Moretti","orcid":"https://orcid.org/0000-0003-3947-488X"},"institutions":[{"id":"https://openalex.org/I97565354","display_name":"University of Lausanne","ror":"https://ror.org/019whta54","country_code":"CH","type":"education","lineage":["https://openalex.org/I97565354"]},{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Sebastien Moretti","raw_affiliation_strings":["SIB Swiss Institute of Bioinformatics, Switzerland Department of Ecology and Evolution, Biophore, Evolutionary Bioinformatics group, University of Lausanne, Switzerland","Department of Ecology and Evolution, Biophore, Evolutionary Bioinformatics group, University of Lausanne, Switzerland","SIB Swiss Institute of Bioinformatics, Switzerland"],"affiliations":[{"raw_affiliation_string":"SIB Swiss Institute of Bioinformatics, Switzerland Department of Ecology and Evolution, Biophore, Evolutionary Bioinformatics group, University of Lausanne, Switzerland","institution_ids":[]},{"raw_affiliation_string":"Department of Ecology and Evolution, Biophore, Evolutionary Bioinformatics group, University of Lausanne, Switzerland","institution_ids":["https://openalex.org/I97565354"]},{"raw_affiliation_string":"SIB Swiss Institute of Bioinformatics, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071162200","display_name":"Chris Morris","orcid":"https://orcid.org/0000-0002-9533-5684"},"institutions":[{"id":"https://openalex.org/I2802015276","display_name":"Daresbury Laboratory","ror":"https://ror.org/0089bg420","country_code":"GB","type":"facility","lineage":["https://openalex.org/I162524378","https://openalex.org/I2802015276","https://openalex.org/I4210087105"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Chris Morris","raw_affiliation_strings":["STFC, Daresbury Laboratory, UK"],"affiliations":[{"raw_affiliation_string":"STFC, Daresbury Laboratory, UK","institution_ids":["https://openalex.org/I2802015276"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089261582","display_name":"Steffen M\u00f6ller","orcid":"https://orcid.org/0000-0002-7187-4683"},"institutions":[{"id":"https://openalex.org/I9341345","display_name":"University of L\u00fcbeck","ror":"https://ror.org/00t3r8h32","country_code":"DE","type":"education","lineage":["https://openalex.org/I9341345"]},{"id":"https://openalex.org/I4665924","display_name":"University of Rostock","ror":"https://ror.org/03zdwsf69","country_code":"DE","type":"education","lineage":["https://openalex.org/I4665924"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Steffen M\u00f6ller","raw_affiliation_strings":["Department of Dermatology, University of L\u00fcbeck, Germany Institute for Biostatistics and Informatics in Medicine and Ageing Research, Rostock University Medical Center, Germany","Department of Dermatology, University of L\u00fcbeck, Germany","Institute for Biostatistics and Informatics in Medicine and Ageing Research, Rostock University Medical Center, Germany"],"affiliations":[{"raw_affiliation_string":"Department of Dermatology, University of L\u00fcbeck, Germany Institute for Biostatistics and Informatics in Medicine and Ageing Research, Rostock University Medical Center, Germany","institution_ids":[]},{"raw_affiliation_string":"Department of Dermatology, University of L\u00fcbeck, Germany","institution_ids":["https://openalex.org/I9341345"]},{"raw_affiliation_string":"Institute for Biostatistics and Informatics in Medicine and Ageing Research, Rostock University Medical Center, Germany","institution_ids":["https://openalex.org/I4665924"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057887304","display_name":"Aleksandra Nenadi\u0107","orcid":"https://orcid.org/0000-0002-2269-3894"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Aleksandra Nenadic","raw_affiliation_strings":["School of Computer Science, University of Manchester, UK"],"affiliations":[{"raw_affiliation_string":"School of Computer Science, University of Manchester, UK","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089890429","display_name":"Hedi Peterson","orcid":"https://orcid.org/0000-0001-9951-5116"},"institutions":[{"id":"https://openalex.org/I56085075","display_name":"University of Tartu","ror":"https://ror.org/03z77qz90","country_code":"EE","type":"education","lineage":["https://openalex.org/I56085075"]}],"countries":["EE"],"is_corresponding":false,"raw_author_name":"Hedi Peterson","raw_affiliation_strings":["Institute of Computer Science, University of Tartu, Estonia"],"affiliations":[{"raw_affiliation_string":"Institute of Computer Science, University of Tartu, Estonia","institution_ids":["https://openalex.org/I56085075"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068295490","display_name":"Giuseppe Profiti","orcid":"https://orcid.org/0000-0001-6067-6174"},"institutions":[{"id":"https://openalex.org/I9360294","display_name":"University of Bologna","ror":"https://ror.org/01111rn36","country_code":"IT","type":"education","lineage":["https://openalex.org/I9360294"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Giuseppe Profiti","raw_affiliation_strings":["Bologna Biocomputing Group, University of Bologna, Italy"],"affiliations":[{"raw_affiliation_string":"Bologna Biocomputing Group, University of Bologna, Italy","institution_ids":["https://openalex.org/I9360294"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109116797","display_name":"Peter Rice","orcid":null},"institutions":[{"id":"https://openalex.org/I47508984","display_name":"Imperial College London","ror":"https://ror.org/041kmwe10","country_code":"GB","type":"education","lineage":["https://openalex.org/I47508984"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Peter Rice","raw_affiliation_strings":["Department of Computing, William Penney Laboratory, Imperial College London, UK"],"affiliations":[{"raw_affiliation_string":"Department of Computing, William Penney Laboratory, Imperial College London, UK","institution_ids":["https://openalex.org/I47508984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009876996","display_name":"Paolo Romano","orcid":"https://orcid.org/0000-0003-4694-3883"},"institutions":[{"id":"https://openalex.org/I4210146472","display_name":"Ospedale Policlinico San Martino","ror":"https://ror.org/04d7es448","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210146472","https://openalex.org/I4210153126"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Paolo Romano","raw_affiliation_strings":["IRCCS AOU San Martino IST, Italy"],"affiliations":[{"raw_affiliation_string":"IRCCS AOU San Martino IST, Italy","institution_ids":["https://openalex.org/I4210146472"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057233874","display_name":"Paola Roncaglia","orcid":"https://orcid.org/0000-0002-2825-0621"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Paola Roncaglia","raw_affiliation_strings":["The European Bioinformatics Institute (EMBL-EBI), UK"],"affiliations":[{"raw_affiliation_string":"The European Bioinformatics Institute (EMBL-EBI), UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031397536","display_name":"Rabie Saidi","orcid":"https://orcid.org/0000-0002-0449-5253"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Rabie Saidi","raw_affiliation_strings":["UniProt, European Bioinformatics Institute (EMBL-EBI), UK"],"affiliations":[{"raw_affiliation_string":"UniProt, European Bioinformatics Institute (EMBL-EBI), UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070513438","display_name":"Andrea Schafferhans","orcid":"https://orcid.org/0000-0002-5569-6186"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Andrea Schafferhans","raw_affiliation_strings":["Department of Informatics, Bioinformatics-I12, TUM, Germany"],"affiliations":[{"raw_affiliation_string":"Department of Informatics, Bioinformatics-I12, TUM, Germany","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091329986","display_name":"Veit Schw\u00e4mmle","orcid":"https://orcid.org/0000-0002-9708-6722"},"institutions":[{"id":"https://openalex.org/I177969490","display_name":"University of Southern Denmark","ror":"https://ror.org/03yrrjy16","country_code":"DK","type":"education","lineage":["https://openalex.org/I177969490"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Veit Schw\u00e4mmle","raw_affiliation_strings":["Protein Research Group, Department for Biochemistry and Molecular Biology, University of Southern Denmark, Denmark"],"affiliations":[{"raw_affiliation_string":"Protein Research Group, Department for Biochemistry and Molecular Biology, University of Southern Denmark, Denmark","institution_ids":["https://openalex.org/I177969490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101139328","display_name":"Callum Smith","orcid":null},"institutions":[{"id":"https://openalex.org/I4210156183","display_name":"Instruct-ERIC","ror":"https://ror.org/05528ey35","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I4210156183"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Callum Smith","raw_affiliation_strings":["Instruct, WTCHG, UK"],"affiliations":[{"raw_affiliation_string":"Instruct, WTCHG, UK","institution_ids":["https://openalex.org/I4210156183"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109253709","display_name":"Maria Maddalena Sperotto","orcid":null},"institutions":[{"id":"https://openalex.org/I96673099","display_name":"Technical University of Denmark","ror":"https://ror.org/04qtj9h94","country_code":"DK","type":"education","lineage":["https://openalex.org/I96673099"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Maria Maddalena Sperotto","raw_affiliation_strings":["Center for Biological Sequence Analysis Department of Systems Biology, Technical University of Denmark, Denmark"],"affiliations":[{"raw_affiliation_string":"Center for Biological Sequence Analysis Department of Systems Biology, Technical University of Denmark, Denmark","institution_ids":["https://openalex.org/I96673099"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069082993","display_name":"Heinz Stockinger","orcid":"https://orcid.org/0000-0003-4666-7719"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Heinz Stockinger","raw_affiliation_strings":["SIB Swiss Institute of Bioinformatics, Switzerland"],"affiliations":[{"raw_affiliation_string":"SIB Swiss Institute of Bioinformatics, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051424845","display_name":"Radka Svobodov\u00e1 Va\u0159ekov\u00e1","orcid":"https://orcid.org/0000-0002-3840-8760"},"institutions":[{"id":"https://openalex.org/I1310815967","display_name":"Central European Institute of Technology","ror":"https://ror.org/01p7k1986","country_code":"CZ","type":"education","lineage":["https://openalex.org/I1310815967"]}],"countries":["CZ"],"is_corresponding":false,"raw_author_name":"Radka Svobodov\u00e1 Va\u0159ekov\u00e1","raw_affiliation_strings":["Central European Institute of Technology (CEITEC), Czech Republic"],"affiliations":[{"raw_affiliation_string":"Central European Institute of Technology (CEITEC), Czech Republic","institution_ids":["https://openalex.org/I1310815967"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066560665","display_name":"Silvio C. E. Tosatto","orcid":"https://orcid.org/0000-0003-4525-7793"},"institutions":[{"id":"https://openalex.org/I138689650","display_name":"University of Padua","ror":"https://ror.org/00240q980","country_code":"IT","type":"education","lineage":["https://openalex.org/I138689650"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Silvio C.E. Tosatto","raw_affiliation_strings":["Department of Biomedical Sciences, University of Padua, Italy"],"affiliations":[{"raw_affiliation_string":"Department of Biomedical Sciences, University of Padua, Italy","institution_ids":["https://openalex.org/I138689650"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020977994","display_name":"Victor de la Torre","orcid":null},"institutions":[{"id":"https://openalex.org/I4210089594","display_name":"Spanish National Cancer Research Centre","ror":"https://ror.org/00bvhmc43","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210089594"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Victor de\u00a0la\u00a0Torre","raw_affiliation_strings":["National Bioinformatics Institute Unit (INB), Fundacion Centro Nacional de Investigaciones Oncologicas, Spain"],"affiliations":[{"raw_affiliation_string":"National Bioinformatics Institute Unit (INB), Fundacion Centro Nacional de Investigaciones Oncologicas, Spain","institution_ids":["https://openalex.org/I4210089594"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057833674","display_name":"Paolo Uva","orcid":"https://orcid.org/0000-0002-9524-8492"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Paolo Uva","raw_affiliation_strings":["Bioinformatics, CRS4, Italy"],"affiliations":[{"raw_affiliation_string":"Bioinformatics, CRS4, Italy","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104560357","display_name":"Allegra Via","orcid":"https://orcid.org/0000-0002-3398-5462"},"institutions":[{"id":"https://openalex.org/I861853513","display_name":"Sapienza University of Rome","ror":"https://ror.org/02be6w209","country_code":"IT","type":"education","lineage":["https://openalex.org/I861853513"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Allegra Via","raw_affiliation_strings":["Dept. of Physics, Sapienza University, Italy"],"affiliations":[{"raw_affiliation_string":"Dept. of Physics, Sapienza University, Italy","institution_ids":["https://openalex.org/I861853513"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010067073","display_name":"Guy Yachdav","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Guy Yachdav","raw_affiliation_strings":["Department of Informatics, Bioinformatics-I12, TUM, Germany"],"affiliations":[{"raw_affiliation_string":"Department of Informatics, Bioinformatics-I12, TUM, Germany","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046629951","display_name":"Federico Zambelli","orcid":"https://orcid.org/0000-0003-3487-4331"},"institutions":[{"id":"https://openalex.org/I189158943","display_name":"University of Milan","ror":"https://ror.org/00wjc7c48","country_code":"IT","type":"education","lineage":["https://openalex.org/I189158943"]},{"id":"https://openalex.org/I4210148743","display_name":"Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies","ror":"https://ror.org/05nzf7q96","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210148743","https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I4210155236","display_name":"National Research Council","ror":"https://ror.org/04zaypm56","country_code":"IT","type":"nonprofit","lineage":["https://openalex.org/I4210155236"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Federico Zambelli","raw_affiliation_strings":["Institute of Biomembranes and Bioenergetics, National Research Council (CNR), and Dept. of Biosciences, University of Milano, Italy"],"affiliations":[{"raw_affiliation_string":"Institute of Biomembranes and Bioenergetics, National Research Council (CNR), and Dept. of Biosciences, University of Milano, Italy","institution_ids":["https://openalex.org/I4210148743","https://openalex.org/I189158943","https://openalex.org/I4210155236"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075419050","display_name":"Gert Vriend","orcid":"https://orcid.org/0000-0002-1067-7053"},"institutions":[{"id":"https://openalex.org/I2802934949","display_name":"Radboud University Medical Center","ror":"https://ror.org/05wg1m734","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2802934949"]},{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Gert Vriend","raw_affiliation_strings":["Radboud University Medical Centre, CMBI, Netherlands"],"affiliations":[{"raw_affiliation_string":"Radboud University Medical Centre, CMBI, Netherlands","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064905883","display_name":"Burkhard Rost","orcid":"https://orcid.org/0000-0003-0179-8424"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Burkhard Rost","raw_affiliation_strings":["Department of Informatics, Bioinformatics-I12, TUM, Germany"],"affiliations":[{"raw_affiliation_string":"Department of Informatics, Bioinformatics-I12, TUM, Germany","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020620537","display_name":"Helen Parkinson","orcid":"https://orcid.org/0000-0003-3035-4195"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Helen Parkinson","raw_affiliation_strings":["The European Bioinformatics Institute (EMBL-EBI), UK"],"affiliations":[{"raw_affiliation_string":"The European Bioinformatics Institute (EMBL-EBI), UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053542119","display_name":"Peter L\u00f8ngreen","orcid":null},"institutions":[{"id":"https://openalex.org/I96673099","display_name":"Technical University of Denmark","ror":"https://ror.org/04qtj9h94","country_code":"DK","type":"education","lineage":["https://openalex.org/I96673099"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Peter L\u00f8ngreen","raw_affiliation_strings":["Center for Biological Sequence Analysis Department of Systems Biology, Technical University of Denmark, Denmark"],"affiliations":[{"raw_affiliation_string":"Center for Biological Sequence Analysis Department of Systems Biology, Technical University of Denmark, Denmark","institution_ids":["https://openalex.org/I96673099"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5011862057","display_name":"S\u00f8ren Brunak","orcid":"https://orcid.org/0000-0003-0316-5866"},"institutions":[{"id":"https://openalex.org/I2801134892","display_name":"Novo Nordisk Foundation","ror":"https://ror.org/04txyc737","country_code":"DK","type":"facility","lineage":["https://openalex.org/I2801134892"]},{"id":"https://openalex.org/I124055696","display_name":"University of Copenhagen","ror":"https://ror.org/035b05819","country_code":"DK","type":"education","lineage":["https://openalex.org/I124055696"]},{"id":"https://openalex.org/I96673099","display_name":"Technical University of Denmark","ror":"https://ror.org/04qtj9h94","country_code":"DK","type":"education","lineage":["https://openalex.org/I96673099"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"S\u00f8ren Brunak","raw_affiliation_strings":["Center for Biological Sequence Analysis Department of Systems Biology, Technical University of Denmark, Denmark Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Denmark","Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Denmark","Center for Biological Sequence Analysis Department of Systems Biology, Technical University of Denmark, Denmark"],"affiliations":[{"raw_affiliation_string":"Center for Biological Sequence Analysis Department of Systems Biology, Technical University of Denmark, Denmark Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Denmark","institution_ids":[]},{"raw_affiliation_string":"Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Denmark","institution_ids":["https://openalex.org/I2801134892","https://openalex.org/I124055696"]},{"raw_affiliation_string":"Center for Biological Sequence Analysis Department of Systems Biology, Technical University of Denmark, Denmark","institution_ids":["https://openalex.org/I96673099"]}]}],"institutions":[],"countries_distinct_count":14,"institutions_distinct_count":69,"corresponding_author_ids":["https://openalex.org/A5080837511"],"corresponding_institution_ids":["https://openalex.org/I96673099"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":40.8085,"has_fulltext":false,"cited_by_count":156,"citation_normalized_percentile":{"value":0.99706123,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"44","issue":"D1","first_page":"D38","last_page":"D47"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9944000244140625,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.9918000102043152,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8709352016448975},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.5256801247596741},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.47763362526893616},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3687783479690552},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3614543676376343},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.15919852256774902}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8709352016448975},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5256801247596741},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.47763362526893616},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3687783479690552},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3614543676376343},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.15919852256774902}],"mesh":[{"descriptor_ui":"D012042","descriptor_name":"Registries","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012042","descriptor_name":"Registries","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012042","descriptor_name":"Registries","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":19,"locations":[{"id":"doi:10.1093/nar/gkv1116","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv1116","pdf_url":"https://academic.oup.com/nar/article-pdf/44/D1/D38/9482499/gkv1116.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:26538599","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26538599","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:sdu.dk:openaire/d3da946d-88b0-4793-96f3-aed70eec78fc","is_oa":false,"landing_page_url":"https://portal.findresearcher.sdu.dk/da/publications/d3da946d-88b0-4793-96f3-aed70eec78fc","pdf_url":null,"source":{"id":"https://openalex.org/S4306400423","display_name":"University of Southern Denmark Research Portal (University of Southern Denmark)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I177969490","host_organization_name":"University of Southern Denmark","host_organization_lineage":["https://openalex.org/I177969490"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Ison, J, Rapacki, K, M\u00e9nager, H, Kala\u0161, M, Rydza, E, Chmura, P, Anthon, C, Beard, N, Berka, K, Bolser, D, Booth, T, Bretaudeau, A, Brezovsky, J, Casadio, R, Cesareni, G, Coppens, F, Cornell, M, Cuccuru, G, Davidsen, K, Vedova, G D, Dogan, T, Doppelt-Azeroual, O, Emery, L, Gasteiger, E, Gatter, T, Goldberg, T, Grosjean, M, Gr\u00fcning, B, Helmer-Citterich, M, Ienasescu, H, Ioannidis, V, Jespersen, M C, Jimenez, R, Juty, N, Juvan, P, Koch, M, Laibe, C, Li, J-W, Licata, L, Mareuil, F, Mi\u010deti\u0107, I, Friborg, R M, Moretti, S, Morris, C, M\u00f6ller, S, Nenadic, A, Peterson, H, Profiti, G, Rice, P, Romano, P, Roncaglia, P, Saidi, R, Schafferhans, A, Schw\u00e4mmle, V, Smith, C, Sperotto, M M, Stockinger, H, Va\u0159ekov\u00e1, R S, Tosatto, S C E, de la Torre, V, Uva, P, Via, A, Yachdav, G, Zambelli, F, Vriend, G, Rost, B, Parkinson, H, L\u00f8ngreen, P & Brunak, S 2016, 'Tools and data services registry : a community effort to document bioinformatics resources', Nucleic Acids Research, vol. 44, no. D1, pp. D38\u2013D47. https://doi.org/10.1093/nar/gkv1116","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:nora.nerc.ac.uk:513612","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4306400758","display_name":"NERC Open Research Archive (Natural Environment Research Council)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I141816643","host_organization_name":"Natural Environment Research Council","host_organization_lineage":["https://openalex.org/I141816643"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"Publication - Article"},{"id":"pmh:oai:art.torvergata.it:2108/124592","is_oa":true,"landing_page_url":"http://hdl.handle.net/2108/124592","pdf_url":"http://nar.oxfordjournals.org/content/early/2015/11/03/nar.gkv1116.long","source":{"id":"https://openalex.org/S4306400993","display_name":"Cineca Institutional Research Information System (Tor Vergata University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I116067653","host_organization_name":"University of Rome Tor Vergata","host_organization_lineage":["https://openalex.org/I116067653"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:iris.unil.ch:iris/165649","is_oa":true,"landing_page_url":"https://iris.unil.ch/handle/iris/165649","pdf_url":"https://iris.unil.ch/bitstreams/c86c64c2-5ef0-4b3f-8624-cac946fdd2ce/download","source":{"id":"https://openalex.org/S7407055444","display_name":"IRIS","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"journal article"},{"id":"pmh:oai:HAL:hal-01594840v1","is_oa":false,"landing_page_url":"https://hal.science/hal-01594840","pdf_url":null,"source":{"id":"https://openalex.org/S4406922466","display_name":"SPIRE - Sciences Po Institutional REpository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Research, 2016, 44 (D1), pp.D38-47. &#x27E8;10.1093/nar/gkv1116&#x27E9;","raw_type":"Journal articles"},{"id":"pmh:oai:air.unimi.it:2434/472312","is_oa":true,"landing_page_url":"http://hdl.handle.net/2434/472312","pdf_url":null,"source":{"id":"https://openalex.org/S4306400516","display_name":"Archivio Istituzionale della Ricerca (Universita Degli Studi Di Milano)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I189158943","host_organization_name":"University of Milan","host_organization_lineage":["https://openalex.org/I189158943"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:archive.ugent.be:7166723","is_oa":true,"landing_page_url":"https://biblio.ugent.be/publication/7166723","pdf_url":null,"source":{"id":"https://openalex.org/S4306400478","display_name":"Ghent University Academic Bibliography (Ghent University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I32597200","host_organization_name":"Ghent University","host_organization_lineage":["https://openalex.org/I32597200"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ISSN: 0305-1048","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:bora.uib.no:1956/12891","is_oa":true,"landing_page_url":"http://hdl.handle.net/1956/12891","pdf_url":null,"source":{"id":"https://openalex.org/S4306400085","display_name":"Bergen Open Research Archive (BORA) (University of Bergen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4432739","host_organization_name":"University of Bergen","host_organization_lineage":["https://openalex.org/I4432739"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/other"},{"id":"pmh:oai:cris.unibo.it:11585/532133","is_oa":false,"landing_page_url":"http://nar.oxfordjournals.org/content/44/D1/D38.long","pdf_url":null,"source":{"id":"https://openalex.org/S4306402579","display_name":"Archivio istituzionale della ricerca (Alma Mater Studiorum Universit\u00e0 di Bologna)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210117483","host_organization_name":"Istituto di Ematologia di Bologna","host_organization_lineage":["https://openalex.org/I4210117483"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:iris.uniroma1.it:11573/836258","is_oa":false,"landing_page_url":"https://hdl.handle.net/11573/836258","pdf_url":null,"source":{"id":"https://openalex.org/S4377196107","display_name":"IRIS Research product catalog (Sapienza University of Rome)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:open-archive.highwire.org:nar:44/D1/D38","is_oa":false,"landing_page_url":"http://nar.oxfordjournals.org/cgi/content/short/44/D1/D38","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"},{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/9b8f8513-f587-48fb-bd40-530141efb7d8","is_oa":true,"landing_page_url":"https://researchprofiles.ku.dk/da/publications/9b8f8513-f587-48fb-bd40-530141efb7d8","pdf_url":null,"source":{"id":"https://openalex.org/S4306401983","display_name":"Research at the University of Copenhagen (University of Copenhagen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I124055696","host_organization_name":"University of Copenhagen","host_organization_lineage":["https://openalex.org/I124055696"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Ison , J , Rapacki , K , M\u00e9nager , H , Kala\u0161 , M , Rydza , E , Chmura , P , Anthon , C , Beard , N , Berka , K , Bolser , D , Booth , T , Bretaudeau , A , Brezovsky , J , Casadio , R , Cesareni , G , Coppens , F , Cornell , M , Cuccuru , G , Davidsen , K , Vedova , G D , Dogan , T , Doppelt-Azeroual , O , Emery , L , Gasteiger , E , Gatter , T , Goldberg , T , Grosjean , M , Gr\u00fcning , B , Helmer-Citterich , M , Ienasescu , H-I , Ioannidis , V , Jespersen , M C , Jimenez , R , Juty , N , Juvan , P , Koch , M , Laibe , C , Li , J-W , Licata , L , Mareuil , F , Mi\u010deti\u0107 , I , Friborg , R M , Moretti , S , Morris , C , M\u00f6ller , S , Nenadic , A , Peterson , H , Profiti , G , Rice , P , Romano , P , Roncaglia , P , Saidi , R , Schafferhans , A , Schw\u00e4mmle , V , Smith , C , Sperotto , M M , Stockinger , H , Va\u0159ekov\u00e1 , R S , Tosatto , S C E , de la Torre , V , Uva , P , Via , A , Yachdav , G , Zambelli , F , Vriend , G , Rost , B , Parkinson , H , L\u00f8ngreen , P & Brunak , S 2016 , ' Tools and data services registry : a community effort to document bioinformatics resources ' , Nucleic Acids Research , vol. 44 , no. D1 , pp. D38-D47 . https://doi.org/10.1093/nar/gkv1116","raw_type":"article"},{"id":"pmh:oai:pure.atira.dk:publications/1c377512-a5e0-4f50-9ec9-c53bfb6d4963","is_oa":true,"landing_page_url":"https://orbit.dtu.dk/en/publications/1c377512-a5e0-4f50-9ec9-c53bfb6d4963","pdf_url":null,"source":{"id":"https://openalex.org/S4306400705","display_name":"Technical University of Denmark, DTU Orbit (Technical University of Denmark, DTU)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I96673099","host_organization_name":"Technical University of Denmark","host_organization_lineage":["https://openalex.org/I96673099"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Ison , J , Rapacki , K , M\u00e9nager , H , Kala\u0161 , M , Rydza , E K , Chmura , P J , Anthon , C , Beard , N , Berka , K , Bolser , D , Booth , T , Bretaudeau , A , Brezovsky , J , Casadio , R , Cesareni , G , Coppens , F , Cornell , M , Cuccuru , G , Davidsen , K , Vedova , G D , Dogan , T , Doppelt-Azeroual , O , Emery , L , Gasteiger , E , Gatter , T , Goldberg , T , Grosjean , M , Gr\u00fcning , B , Helmer-Citterich , M , Ienasescu , H , Ioannidis , V , Jespersen , M C , Jimenez , R , Juty , N , Juvan , P , Koch , M , Laibe , C , Li , J-W , Licata , L , Mareuil , F , Mi\u010deti\u0107 , I , Friborg , R M , Moretti , S , Morris , C , M\u00f6ller , S , Nenadic , A , Peterson , H , Profiti , G , Rice , P , Romano , P , Roncaglia , P , Saidi , R , Schafferhans , A , Schw\u00e4mmle , V , Smith , C , Sperotto , M M , Stockinger , H , Va\u0159ekov\u00e1 , R S , Tosatto , S C E , de la Torre , V , Uva , P , Via , A , Yachdav , G , Zambelli , F , Vriend , G , Rost , B , Parkinson , H , L\u00f8ngreen , P &amp; Brunak , S 2016 , ' Tools and data services registry : a community effort to document bioinformatics resources ' , Nucleic Acids Research , vol. 44 , no. D1 , gkv1116 , pp. D38-D47 . https://doi.org/10.1093/nar/gkv1116","raw_type":"article"},{"id":"pmh:oai:pure.atira.dk:publications/9b8f8513-f587-48fb-bd40-530141efb7d8","is_oa":true,"landing_page_url":"https://curis.ku.dk/portal/da/publications/tools-and-data-services-registry(9b8f8513-f587-48fb-bd40-530141efb7d8).html","pdf_url":null,"source":{"id":"https://openalex.org/S4306401983","display_name":"Research at the University of Copenhagen (University of Copenhagen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I124055696","host_organization_name":"University of Copenhagen","host_organization_lineage":["https://openalex.org/I124055696"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Ison , J , Rapacki , K , M\u00e9nager , H , Kala\u0161 , M , Rydza , E , Chmura , P , Anthon , C , Beard , N , Berka , K , Bolser , D , Booth , T , Bretaudeau , A , Brezovsky , J , Casadio , R , Cesareni , G , Coppens , F , Cornell , M , Cuccuru , G , Davidsen , K , Vedova , G D , Dogan , T , Doppelt-Azeroual , O , Emery , L , Gasteiger , E , Gatter , T , Goldberg , T , Grosjean , M , Gr\u00fcning , B , Helmer-Citterich , M , Ienasescu , H-I , Ioannidis , V , Jespersen , M C , Jimenez , R , Juty , N , Juvan , P , Koch , M , Laibe , C , Li , J-W , Licata , L , Mareuil , F , Mi\u010deti\u0107 , I , Friborg , R M , Moretti , S , Morris , C , M\u00f6ller , S , Nenadic , A , Peterson , H , Profiti , G , Rice , P , Romano , P , Roncaglia , P , Saidi , R , Schafferhans , A , Schw\u00e4mmle , V , Smith , C , Sperotto , M M , Stockinger , H , Va\u0159ekov\u00e1 , R S , Tosatto , S C E , de la Torre , V , Uva , P , Via , A , Yachdav , G , Zambelli , F , Vriend , G , Rost , B , Parkinson , H , L\u00f8ngreen , P & Brunak , S 2016 , ' Tools and data services registry : a community effort to document bioinformatics resources ' , Nucleic Acids Research , vol. 44 , no. D1 , pp. D38-D47 . https://doi.org/10.1093/nar/gkv1116","raw_type":"article"},{"id":"pmh:oai:repository.ubn.ru.nl:2066/171819","is_oa":false,"landing_page_url":"http://hdl.handle.net/2066/171819","pdf_url":null,"source":{"id":"https://openalex.org/S4306401067","display_name":"Radboud Repository (Radboud University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I145872427","host_organization_name":"Radboud University Nijmegen","host_organization_lineage":["https://openalex.org/I145872427"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Research, 44, D1, pp. D38-47","raw_type":"Article / Letter to editor"},{"id":"pmh:oai:www.research.unipd.it:11577/3230631","is_oa":true,"landing_page_url":"http://hdl.handle.net/11577/3230631","pdf_url":null,"source":{"id":"https://openalex.org/S4306402547","display_name":"Padua Research Archive (University of Padova)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I138689650","host_organization_name":"University of Padua","host_organization_lineage":["https://openalex.org/I138689650"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"doi:10.25504/fairsharing.63520c","is_oa":true,"landing_page_url":"https://doi.org/10.25504/fairsharing.63520c","pdf_url":null,"source":{"id":"https://openalex.org/S7407053452","display_name":"FAIRsharing.org","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"dataset"}],"best_oa_location":{"id":"doi:10.1093/nar/gkv1116","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv1116","pdf_url":"https://academic.oup.com/nar/article-pdf/44/D1/D38/9482499/gkv1116.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4000000059604645,"display_name":"Responsible consumption and production","id":"https://metadata.un.org/sdg/12"}],"awards":[{"id":"https://openalex.org/G3276233045","display_name":null,"funder_award_id":"ceh020003","funder_id":"https://openalex.org/F4320334631","funder_display_name":"Natural Environment Research Council"},{"id":"https://openalex.org/G5910015375","display_name":null,"funder_award_id":"ceh020003","funder_id":"https://openalex.org/F4320320022","funder_display_name":"Sight Research UK"}],"funders":[{"id":"https://openalex.org/F4320320022","display_name":"Sight Research UK","ror":"https://ror.org/03z2py885"},{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320323389","display_name":"Universit\u00e4t Bielefeld","ror":"https://ror.org/02hpadn98"},{"id":"https://openalex.org/F4320334631","display_name":"Natural Environment Research Council","ror":"https://ror.org/02b5d8509"},{"id":"https://openalex.org/F4320337348","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2145374174.pdf","grobid_xml":"https://content.openalex.org/works/W2145374174.grobid-xml"},"referenced_works_count":41,"referenced_works":["https://openalex.org/W967886317","https://openalex.org/W1969739015","https://openalex.org/W1973650088","https://openalex.org/W1985468994","https://openalex.org/W1989183564","https://openalex.org/W1992102171","https://openalex.org/W2026186077","https://openalex.org/W2038310925","https://openalex.org/W2038777423","https://openalex.org/W2043764521","https://openalex.org/W2063822856","https://openalex.org/W2071427873","https://openalex.org/W2087628652","https://openalex.org/W2100827887","https://openalex.org/W2104483961","https://openalex.org/W2105803236","https://openalex.org/W2109488005","https://openalex.org/W2112414993","https://openalex.org/W2114850508","https://openalex.org/W2117363952","https://openalex.org/W2121015328","https://openalex.org/W2121792371","https://openalex.org/W2123724865","https://openalex.org/W2123887743","https://openalex.org/W2128567635","https://openalex.org/W2130754716","https://openalex.org/W2134386780","https://openalex.org/W2138608730","https://openalex.org/W2141291860","https://openalex.org/W2141541659","https://openalex.org/W2144305952","https://openalex.org/W2145374174","https://openalex.org/W2150934173","https://openalex.org/W2160697532","https://openalex.org/W2160943260","https://openalex.org/W2162094394","https://openalex.org/W2163700660","https://openalex.org/W2166002893","https://openalex.org/W2605068739","https://openalex.org/W2950047033","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W4391375266","https://openalex.org/W2082860237","https://openalex.org/W2119695867","https://openalex.org/W2130076355","https://openalex.org/W1990804418","https://openalex.org/W1993764875","https://openalex.org/W2046158694","https://openalex.org/W2788277189","https://openalex.org/W2013243191"],"abstract_inverted_index":{"Life":[0],"sciences":[1],"are":[2,32],"yielding":[3],"huge":[4],"data":[5],"sets":[6],"that":[7,72],"underpin":[8],"scientific":[9,44],"discoveries":[10],"fundamental":[11],"to":[12,77,106,137,188],"improvement":[13],"in":[14,34,191],"human":[15],"health,":[16],"agriculture":[17],"and":[18,30,37,61,81,109,123,135,140,166],"the":[19,56,83,87,151,172],"environment.":[20],"In":[21],"support":[22],"of":[23,28,43,48,50,67,112,120,145,148,180],"these":[24,51],"discoveries,":[25],"a":[26,41,64,93,107,130,143,176],"plethora":[27],"databases":[29],"tools":[31],"deployed,":[33],"technically":[35],"complex":[36],"diverse":[38],"implementations,":[39],"across":[40,55],"spectrum":[42],"disciplines.":[45],"The":[46,69,117,195],"corpus":[47],"documentation":[49],"resources":[52,85],"is":[53,71,127,197],"fragmented":[54],"Web,":[57],"with":[58,156],"much":[59],"redundancy,":[60],"has":[62],"lacked":[63],"common":[65,193],"standard":[66,177],"information.":[68],"outcome":[70],"scientists":[73],"must":[74],"often":[75],"struggle":[76],"find,":[78],"understand,":[79],"compare":[80],"use":[82],"best":[84],"for":[86,102,178],"task":[88],"at":[89,200],"hand.Here":[90],"we":[91,185],"present":[92],"community-driven":[94],"curation":[95,131],"effort,":[96],"supported":[97],"by":[98,129,134],"ELIXIR-the":[99],"European":[100],"infrastructure":[101],"biological":[103],"information-that":[104],"aspires":[105],"comprehensive":[108],"consistent":[110],"registry":[111,152,173,196],"information":[113,181],"about":[114,182],"bioinformatics":[115,183],"resources.":[116],"sustainable":[118],"upkeep":[119],"this":[121,192],"Tools":[122],"Data":[124],"Services":[125],"Registry":[126],"assured":[128],"effort":[132],"driven":[133],"tailored":[136],"local":[138],"needs,":[139],"shared":[141],"amongst":[142],"network":[144],"engaged":[146],"partners.As":[147],"November":[149],"2015,":[150],"includes":[153],"1785":[154],"resources,":[155],"depositions":[157],"from":[158],"126":[159],"individual":[160],"registrations":[161],"including":[162],"52":[163],"institutional":[164],"providers":[165],"74":[167],"individuals.":[168],"With":[169],"community":[170],"support,":[171],"can":[174],"become":[175],"dissemination":[179],"resources:":[184],"welcome":[186],"everyone":[187],"join":[189],"us":[190],"endeavour.":[194],"freely":[198],"available":[199],"https://bio.tools.":[201]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":11},{"year":2024,"cited_by_count":20},{"year":2023,"cited_by_count":16},{"year":2022,"cited_by_count":11},{"year":2021,"cited_by_count":12},{"year":2020,"cited_by_count":16},{"year":2019,"cited_by_count":21},{"year":2018,"cited_by_count":12},{"year":2017,"cited_by_count":22},{"year":2016,"cited_by_count":11},{"year":2015,"cited_by_count":2}],"updated_date":"2026-03-08T08:50:53.379069","created_date":"2016-06-24T00:00:00"}
