{"id":"https://openalex.org/W1935434993","doi":"https://doi.org/10.1093/nar/gkv1031","title":"ChEBI in 2016: Improved services and an expanding collection of metabolites","display_name":"ChEBI in 2016: Improved services and an expanding collection of metabolites","publication_year":2015,"publication_date":"2015-10-13","ids":{"openalex":"https://openalex.org/W1935434993","doi":"https://doi.org/10.1093/nar/gkv1031","mag":"1935434993","pmid":"https://pubmed.ncbi.nlm.nih.gov/26467479"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkv1031","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv1031","pdf_url":"https://academic.oup.com/nar/article-pdf/44/D1/D1214/9481916/gkv1031.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/44/D1/D1214/9481916/gkv1031.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5044072805","display_name":"Janna Hastings","orcid":"https://orcid.org/0000-0002-3469-4923"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Janna Hastings","raw_affiliation_strings":["Cheminformatics and Metabolism, European Molecular Biology Laboratory-European Bioinformatics Institute (EMBL-EBI), Hinxton, UK hastings@ebi.ac.uk","1Cheminformatics and Metabolism, European Molecular Biology Laboratory\u2014European Bioinformatics Institute (EMBL-EBI), Hinxton, UK"],"affiliations":[{"raw_affiliation_string":"Cheminformatics and Metabolism, European Molecular Biology Laboratory-European Bioinformatics Institute (EMBL-EBI), Hinxton, UK hastings@ebi.ac.uk","institution_ids":[]},{"raw_affiliation_string":"1Cheminformatics and Metabolism, European Molecular Biology Laboratory\u2014European Bioinformatics Institute (EMBL-EBI), Hinxton, UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031305148","display_name":"Gareth Owen","orcid":"https://orcid.org/0000-0001-7265-5776"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Gareth Owen","raw_affiliation_strings":["Cheminformatics and Metabolism, European Molecular Biology Laboratory-European Bioinformatics Institute (EMBL-EBI), Hinxton, UK","Cheminformatics and Metabolism, European Molecular Biology Laboratory\u2014European Bioinformatics Institute (EMBL-EBI), Hinxton, UK"],"affiliations":[{"raw_affiliation_string":"Cheminformatics and Metabolism, European Molecular Biology Laboratory-European Bioinformatics Institute (EMBL-EBI), Hinxton, UK","institution_ids":["https://openalex.org/I1303153112"]},{"raw_affiliation_string":"Cheminformatics and Metabolism, European Molecular Biology Laboratory\u2014European Bioinformatics Institute (EMBL-EBI), Hinxton, UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013071555","display_name":"Adriano Dekker","orcid":"https://orcid.org/0000-0001-5713-5166"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Adriano Dekker","raw_affiliation_strings":["Cheminformatics and Metabolism, European Molecular Biology Laboratory-European Bioinformatics Institute (EMBL-EBI), Hinxton, UK","Cheminformatics and Metabolism, European Molecular Biology Laboratory\u2014European Bioinformatics Institute (EMBL-EBI), Hinxton, UK"],"affiliations":[{"raw_affiliation_string":"Cheminformatics and Metabolism, European Molecular Biology Laboratory-European Bioinformatics Institute (EMBL-EBI), Hinxton, UK","institution_ids":["https://openalex.org/I1303153112"]},{"raw_affiliation_string":"Cheminformatics and Metabolism, European Molecular Biology Laboratory\u2014European Bioinformatics Institute (EMBL-EBI), Hinxton, UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002211213","display_name":"Marcus Ennis","orcid":"https://orcid.org/0000-0002-6580-6297"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Marcus Ennis","raw_affiliation_strings":["Cheminformatics and Metabolism, European Molecular Biology Laboratory-European Bioinformatics Institute (EMBL-EBI), Hinxton, UK","Cheminformatics and Metabolism, European Molecular Biology Laboratory\u2014European Bioinformatics Institute (EMBL-EBI), Hinxton, UK"],"affiliations":[{"raw_affiliation_string":"Cheminformatics and Metabolism, European Molecular Biology Laboratory-European Bioinformatics Institute (EMBL-EBI), Hinxton, UK","institution_ids":["https://openalex.org/I1303153112"]},{"raw_affiliation_string":"Cheminformatics and Metabolism, European Molecular Biology Laboratory\u2014European Bioinformatics Institute (EMBL-EBI), Hinxton, UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086780375","display_name":"Namrata Kale","orcid":"https://orcid.org/0000-0002-4255-8104"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Namrata Kale","raw_affiliation_strings":["Cheminformatics and Metabolism, European Molecular Biology Laboratory-European Bioinformatics Institute (EMBL-EBI), Hinxton, UK","Cheminformatics and Metabolism, European Molecular Biology Laboratory\u2014European Bioinformatics Institute (EMBL-EBI), Hinxton, UK"],"affiliations":[{"raw_affiliation_string":"Cheminformatics and Metabolism, European Molecular Biology Laboratory-European Bioinformatics Institute (EMBL-EBI), Hinxton, UK","institution_ids":["https://openalex.org/I1303153112"]},{"raw_affiliation_string":"Cheminformatics and Metabolism, European Molecular Biology Laboratory\u2014European Bioinformatics Institute (EMBL-EBI), Hinxton, UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019437130","display_name":"Venkatesh Muthukrishnan","orcid":"https://orcid.org/0000-0002-6850-9888"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Venkatesh Muthukrishnan","raw_affiliation_strings":["Cheminformatics and Metabolism, European Molecular Biology Laboratory-European Bioinformatics Institute (EMBL-EBI), Hinxton, UK","Cheminformatics and Metabolism, European Molecular Biology Laboratory\u2014European Bioinformatics Institute (EMBL-EBI), Hinxton, UK"],"affiliations":[{"raw_affiliation_string":"Cheminformatics and Metabolism, European Molecular Biology Laboratory-European Bioinformatics Institute (EMBL-EBI), Hinxton, UK","institution_ids":["https://openalex.org/I1303153112"]},{"raw_affiliation_string":"Cheminformatics and Metabolism, European Molecular Biology Laboratory\u2014European Bioinformatics Institute (EMBL-EBI), Hinxton, UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023586294","display_name":"Steve Turner","orcid":"https://orcid.org/0000-0001-8393-5060"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Steve Turner","raw_affiliation_strings":["Cheminformatics and Metabolism, European Molecular Biology Laboratory-European Bioinformatics Institute (EMBL-EBI), Hinxton, UK","Cheminformatics and Metabolism, European Molecular Biology Laboratory\u2014European Bioinformatics Institute (EMBL-EBI), Hinxton, UK"],"affiliations":[{"raw_affiliation_string":"Cheminformatics and Metabolism, European Molecular Biology Laboratory-European Bioinformatics Institute (EMBL-EBI), Hinxton, UK","institution_ids":["https://openalex.org/I1303153112"]},{"raw_affiliation_string":"Cheminformatics and Metabolism, European Molecular Biology Laboratory\u2014European Bioinformatics Institute (EMBL-EBI), Hinxton, UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062241736","display_name":"Neil Swainston","orcid":"https://orcid.org/0000-0001-7020-1236"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Neil Swainston","raw_affiliation_strings":["Manchester Centre for Integrative Systems Biology, University of Manchester, UK"],"affiliations":[{"raw_affiliation_string":"Manchester Centre for Integrative Systems Biology, University of Manchester, UK","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058635802","display_name":"Pedro Mendes","orcid":"https://orcid.org/0000-0001-6507-9168"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Pedro Mendes","raw_affiliation_strings":["Manchester Centre for Integrative Systems Biology, University of Manchester, UK"],"affiliations":[{"raw_affiliation_string":"Manchester Centre for Integrative Systems Biology, University of Manchester, UK","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5040194803","display_name":"Christoph Steinbeck","orcid":"https://orcid.org/0000-0001-6966-0814"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Christoph Steinbeck","raw_affiliation_strings":["Cheminformatics and Metabolism, European Molecular Biology Laboratory-European Bioinformatics Institute (EMBL-EBI), Hinxton, UK steinbeck@ebi.ac.uk","1Cheminformatics and Metabolism, European Molecular Biology Laboratory\u2014European Bioinformatics Institute (EMBL-EBI), Hinxton, UK"],"affiliations":[{"raw_affiliation_string":"Cheminformatics and Metabolism, European Molecular Biology Laboratory-European Bioinformatics Institute (EMBL-EBI), Hinxton, UK steinbeck@ebi.ac.uk","institution_ids":[]},{"raw_affiliation_string":"1Cheminformatics and Metabolism, European Molecular Biology Laboratory\u2014European Bioinformatics Institute (EMBL-EBI), Hinxton, UK","institution_ids":["https://openalex.org/I1303153112"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5044072805"],"corresponding_institution_ids":["https://openalex.org/I1303153112"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":17.2034,"has_fulltext":true,"cited_by_count":1136,"citation_normalized_percentile":{"value":0.99502021,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":"44","issue":"D1","first_page":"D1214","last_page":"D1219"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/java","display_name":"Java","score":0.5819505453109741},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.576499342918396},{"id":"https://openalex.org/keywords/python","display_name":"Python (programming language)","score":0.5344464182853699},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.5340043306350708},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.4910554885864258},{"id":"https://openalex.org/keywords/java-applet","display_name":"Java applet","score":0.49000635743141174},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4527840316295624},{"id":"https://openalex.org/keywords/dependency","display_name":"Dependency (UML)","score":0.4489808976650238},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3943863809108734},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.35829058289527893},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.17011556029319763},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.1264786720275879}],"concepts":[{"id":"https://openalex.org/C548217200","wikidata":"https://www.wikidata.org/wiki/Q251","display_name":"Java","level":2,"score":0.5819505453109741},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.576499342918396},{"id":"https://openalex.org/C519991488","wikidata":"https://www.wikidata.org/wiki/Q28865","display_name":"Python (programming language)","level":2,"score":0.5344464182853699},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.5340043306350708},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.4910554885864258},{"id":"https://openalex.org/C15524039","wikidata":"https://www.wikidata.org/wiki/Q865817","display_name":"Java applet","level":3,"score":0.49000635743141174},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4527840316295624},{"id":"https://openalex.org/C19768560","wikidata":"https://www.wikidata.org/wiki/Q320727","display_name":"Dependency (UML)","level":2,"score":0.4489808976650238},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3943863809108734},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.35829058289527893},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.17011556029319763},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.1264786720275879},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008660","descriptor_name":"Metabolism","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008660","descriptor_name":"Metabolism","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008660","descriptor_name":"Metabolism","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008660","descriptor_name":"Metabolism","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D062126","descriptor_name":"Databases, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062126","descriptor_name":"Databases, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062126","descriptor_name":"Databases, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062126","descriptor_name":"Databases, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":9,"locations":[{"id":"doi:10.1093/nar/gkv1031","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv1031","pdf_url":"https://academic.oup.com/nar/article-pdf/44/D1/D1214/9481916/gkv1031.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:26467479","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26467479","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pure.atira.dk:publications/33458f15-1965-4076-bf12-555b196c7e16","is_oa":true,"landing_page_url":null,"pdf_url":"https://www.research.manchester.ac.uk/portal/en/publications/chebi-in-2016-improved-services-and-an-expanding-collection-of-metabolites(33458f15-1965-4076-bf12-555b196c7e16).html","source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":""},{"id":"pmh:oai:pure.atira.dk:publications/33458f15-1965-4076-bf12-555b196c7e16","is_oa":true,"landing_page_url":"https://research.manchester.ac.uk/en/publications/33458f15-1965-4076-bf12-555b196c7e16","pdf_url":"https://www.research.manchester.ac.uk/portal/en/publications/chebi-in-2016-improved-services-and-an-expanding-collection-of-metabolites(33458f15-1965-4076-bf12-555b196c7e16).html","source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Hastings, J, Owen, G, Dekker, A, Ennis, M, Kale, N, Muthukrishnan, V, Turner, S, Swainston, N, Pedrosa Mendes, P, Mendes, P & Steinbeck, C 2015, 'ChEBI in 2016: Improved services and an expanding collection of metabolites', Nucleic acids research. https://doi.org/10.1093/nar/gkv1031","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.818.2160","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.818.2160","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/10/8c/gkv1031.PMC4702775.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.896.1910","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.896.1910","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/early/2015/10/13/nar.gkv1031.full.pdf","raw_type":"text"},{"id":"pmh:oai:europepmc.org:3680690","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4702775","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:open-archive.highwire.org:nar:44/D1/D1214","is_oa":false,"landing_page_url":"http://nar.oxfordjournals.org/cgi/content/short/44/D1/D1214","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"},{"id":"doi:10.25504/fairsharing.62qk8w","is_oa":true,"landing_page_url":"https://doi.org/10.25504/fairsharing.62qk8w","pdf_url":null,"source":{"id":"https://openalex.org/S7407053452","display_name":"FAIRsharing.org","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"dataset"}],"best_oa_location":{"id":"doi:10.1093/nar/gkv1031","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkv1031","pdf_url":"https://academic.oup.com/nar/article-pdf/44/D1/D1214/9481916/gkv1031.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1586619357","display_name":null,"funder_award_id":"BB/K019783/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G5645031377","display_name":"Continued development of ChEBI towards better usability for the systems biology and metabolic modelling community","funder_award_id":"BB/K019783/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G995922834","display_name":null,"funder_award_id":"BB/M017702/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1935434993.pdf","grobid_xml":"https://content.openalex.org/works/W1935434993.grobid-xml"},"referenced_works_count":22,"referenced_works":["https://openalex.org/W1852306145","https://openalex.org/W1935434993","https://openalex.org/W1965091013","https://openalex.org/W1990442426","https://openalex.org/W2031450906","https://openalex.org/W2033377040","https://openalex.org/W2047632644","https://openalex.org/W2053385401","https://openalex.org/W2059327215","https://openalex.org/W2069928158","https://openalex.org/W2098173334","https://openalex.org/W2114688451","https://openalex.org/W2125904022","https://openalex.org/W2132218677","https://openalex.org/W2140611297","https://openalex.org/W2149401581","https://openalex.org/W2151346683","https://openalex.org/W2161919540","https://openalex.org/W2165649953","https://openalex.org/W2168356677","https://openalex.org/W2409696744","https://openalex.org/W2739999456"],"related_works":["https://openalex.org/W2344780600","https://openalex.org/W2948473269","https://openalex.org/W3196043647","https://openalex.org/W3172515123","https://openalex.org/W2473435377","https://openalex.org/W4287163809","https://openalex.org/W650470976","https://openalex.org/W626257650","https://openalex.org/W2096381758","https://openalex.org/W2914459301"],"abstract_inverted_index":{"ChEBI":[0,68],"is":[1,23,46],"a":[2,35,116,121,133,154],"database":[3,38],"and":[4,28,41,49,64,87,95,113,139,153],"ontology":[5,27],"containing":[6],"information":[7],"about":[8],"chemical":[9,36],"entities":[10],"of":[11,21,76,109,132],"biological":[12],"interest.":[13],"It":[14],"currently":[15],"includes":[16],"over":[17],"46,000":[18],"entries,":[19],"each":[20],"which":[22],"classified":[24],"within":[25],"the":[26,67,98,130,158],"assigned":[29],"multiple":[30],"annotations":[31],"including":[32,82],"(where":[33],"relevant)":[34],"structure,":[37],"cross-references,":[39],"synonyms":[40],"literature":[42],"citations.":[43],"All":[44],"content":[45],"freely":[47],"available":[48],"can":[50],"be":[51],"accessed":[52],"online":[53],"at":[54],"http://www.ebi.ac.uk/chebi.":[55],"In":[56],"this":[57],"update":[58,119],"paper,":[59],"we":[60,142],"describe":[61],"recent":[62],"improvements":[63],"additions":[65],"to":[66,120],"offering.":[69],"We":[70],"have":[71,143],"substantially":[72],"extended":[73],"our":[74,102],"collection":[75],"endogenous":[77],"metabolites":[78],"for":[79,157],"several":[80],"organisms":[81],"human,":[83],"mouse,":[84],"Escherichia":[85],"coli":[86],"yeast.":[88],"Our":[89],"front-end":[90],"has":[91,126],"also":[92],"been":[93,127],"reworked":[94],"updated,":[96],"improving":[97],"user":[99],"experience,":[100],"removing":[101],"dependency":[103],"on":[104],"Java":[105],"applets":[106],"in":[107,136],"favour":[108],"embedded":[110],"JavaScript":[111],"components":[112],"moving":[114],"from":[115],"monthly":[117],"release":[118],"'live'":[122],"website.":[123],"Programmatic":[124],"access":[125],"improved":[128],"by":[129],"introduction":[131],"library,":[134],"libChEBI,":[135],"Java,":[137],"Python":[138],"Matlab.":[140],"Furthermore,":[141],"added":[144],"two":[145],"new":[146],"tools,":[147],"namely":[148],"an":[149],"analysis":[150],"tool,":[151],"BiNChE,":[152],"query":[155],"tool":[156],"ontology,":[159],"OntoQuery.":[160]},"counts_by_year":[{"year":2026,"cited_by_count":37},{"year":2025,"cited_by_count":142},{"year":2024,"cited_by_count":150},{"year":2023,"cited_by_count":177},{"year":2022,"cited_by_count":147},{"year":2021,"cited_by_count":137},{"year":2020,"cited_by_count":136},{"year":2019,"cited_by_count":94},{"year":2018,"cited_by_count":59},{"year":2017,"cited_by_count":28},{"year":2016,"cited_by_count":23},{"year":2015,"cited_by_count":3}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2016-06-24T00:00:00"}
