{"id":"https://openalex.org/W24838566","doi":"https://doi.org/10.1093/nar/gku395","title":"Plant communities study.","display_name":"Plant communities study.","publication_year":1980,"publication_date":"1980-01-01","ids":{"openalex":"https://openalex.org/W24838566","doi":"https://doi.org/10.1093/nar/gku395","mag":"24838566"},"language":"en","primary_location":{"id":"mag:24838566","is_oa":false,"landing_page_url":"https://deepblue.lib.umich.edu/handle/2027.42/53294","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},"type":"article","indexed_in":[],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5015827875","display_name":"Barbara L. Clauson","orcid":null},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Barbara L. Clauson","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5015827875"],"corresponding_institution_ids":[],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.00252286,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"42","issue":"Web Server issue","first_page":"W59","last_page":"63"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10825","display_name":"Plant Pathogens and Fungal Diseases","score":0.22220000624656677,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10825","display_name":"Plant Pathogens and Fungal Diseases","score":0.22220000624656677,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.36799395084381104}],"concepts":[{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.36799395084381104}],"mesh":[],"locations_count":2,"locations":[{"id":"mag:24838566","is_oa":false,"landing_page_url":"https://deepblue.lib.umich.edu/handle/2027.42/53294","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:deepblue.lib.umich.edu:2027.42/53294","is_oa":false,"landing_page_url":"http://hdl.handle.net/2027.42/53294","pdf_url":null,"source":{"id":"https://openalex.org/S4306400393","display_name":"Deep Blue (University of Michigan)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I27837315","host_organization_name":"University of Michigan","host_organization_lineage":["https://openalex.org/I27837315"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Working Paper"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.7400000095367432,"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2325905451","https://openalex.org/W1520922330","https://openalex.org/W2613877204","https://openalex.org/W2328989419","https://openalex.org/W2321948271","https://openalex.org/W1544659939","https://openalex.org/W2975187078","https://openalex.org/W954399967","https://openalex.org/W242412863","https://openalex.org/W1860375537","https://openalex.org/W2587275346","https://openalex.org/W3083864617","https://openalex.org/W1490621684","https://openalex.org/W2271616005","https://openalex.org/W2333308667","https://openalex.org/W2092209242","https://openalex.org/W2049435452","https://openalex.org/W2016387969","https://openalex.org/W2016337148","https://openalex.org/W2076995301"],"abstract_inverted_index":{"Spatial":[0],"Epitope":[1],"Prediction":[2],"server":[3],"for":[4],"Protein":[5],"Antigens":[6],"(SEPPA)":[7],"has":[8,139,150],"received":[9],"lots":[10],"of":[11,25,58,68,73,88,108,113,155,160],"feedback":[12],"since":[13],"being":[14],"published":[15],"in":[16,39,181],"2009.":[17],"In":[18,132],"this":[19,133],"improved":[20],"version,":[21,134],"relative":[22],"ASA":[23],"preference":[24],"unit":[26],"patch":[27],"and":[28,44,71,111,158,179],"consolidated":[29],"amino":[30],"acid":[31],"index":[32],"were":[33,48,76],"added":[34],"as":[35,143],"further":[36],"classification":[37],"parameters":[38],"addition":[40],"to":[41,80,125,130],"unit-triangle":[42],"propensity":[43],"clustering":[45],"coefficient":[46],"which":[47,149],"previously":[49],"reported.":[50],"Then":[51],"logistic":[52],"regression":[53],"model":[54],"was":[55],"adopted":[56],"instead":[57],"the":[59,94,102,119,135,146,152,169],"previous":[60],"simple":[61],"additive":[62],"one.":[63],"Most":[64],"importantly,":[65],"subcellular":[66,106,153],"localization":[67,107,154],"protein":[69,109,123,156],"antigen":[70,110,157],"species":[72,112,159],"immune":[74,114,161],"host":[75,115],"fully":[77],"taken":[78],"account":[79],"improve":[81],"prediction.":[82],"The":[83],"result":[84],"shows":[85,165],"that":[86],"AUC":[87,120,129],"0.745":[89],"(5-fold":[90],"cross-validation)":[91],"is":[92,196],"almost":[93],"baseline":[95],"performance":[96],"with":[97],"no":[98],"differentiation":[99],"like":[100,173],"all":[101],"other":[103,170],"tools.":[104],"Specifying":[105],"will":[116],"generally":[117],"push":[118,128],"up.":[121],"Secretory":[122],"immunized":[124],"mouse":[126],"can":[127,189],"0.823.":[131],"false":[136],"positive":[137],"rate":[138],"been":[140],"largely":[141],"decreased":[142],"well.":[144],"As":[145],"first":[147],"method":[148],"considered":[151],"host,":[162],"SEPPA":[163,187],"2.0":[164,188],"obvious":[166],"advantages":[167],"over":[168],"popular":[171],"servers":[172],"SEPPA,":[174],"PEPITO,":[175],"DiscoTope-2,":[176],"B-pred,":[177],"Bpredictor":[178],"Epitopia":[180],"supporting":[182],"more":[183],"specific":[184],"biological":[185],"needs.":[186],"be":[190],"accessed":[191],"at":[192],"http://badd.tongji.edu.cn/seppa/.":[193],"Batch":[194],"query":[195],"also":[197],"supported.":[198]},"counts_by_year":[],"updated_date":"2026-04-28T14:05:53.105641","created_date":"2025-10-10T00:00:00"}
