{"id":"https://openalex.org/W2137974866","doi":"https://doi.org/10.1093/nar/gku270","title":"The DynaMine webserver: predicting protein dynamics from sequence","display_name":"The DynaMine webserver: predicting protein dynamics from sequence","publication_year":2014,"publication_date":"2014-04-11","ids":{"openalex":"https://openalex.org/W2137974866","doi":"https://doi.org/10.1093/nar/gku270","mag":"2137974866","pmid":"https://pubmed.ncbi.nlm.nih.gov/24728994"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gku270","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gku270","pdf_url":"https://academic.oup.com/nar/article-pdf/42/W1/W264/7432466/gku270.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/42/W1/W264/7432466/gku270.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5072420259","display_name":"Elisa Cilia","orcid":null},"institutions":[{"id":"https://openalex.org/I132053463","display_name":"Universit\u00e9 Libre de Bruxelles","ror":"https://ror.org/01r9htc13","country_code":"BE","type":"education","lineage":["https://openalex.org/I132053463"]},{"id":"https://openalex.org/I4210139176","display_name":"Interuniversity Institute for High Energies","ror":"https://ror.org/040w2dm02","country_code":"BE","type":"facility","lineage":["https://openalex.org/I132053463","https://openalex.org/I13469542","https://openalex.org/I4210139176"]}],"countries":["BE"],"is_corresponding":true,"raw_author_name":"Elisa Cilia","raw_affiliation_strings":["MLG, Computer Science Department, Universit\u00e9 Libre de Bruxelles (ULB), Brussels, Belgium Interuniversity Institute of Bioinformatics in Brussels (IB), ULB-VUB, Brussels, Belgium ecilia@ulb.ac.be","Interuniversity Institute of Bioinformatics in Brussels (IB2), ULB-VUB, Brussels, Belgium","MLG, Computer Science Department, Universit\u00e9 Libre de Bruxelles (ULB), Brussels, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"MLG, Computer Science Department, Universit\u00e9 Libre de Bruxelles (ULB), Brussels, Belgium Interuniversity Institute of Bioinformatics in Brussels (IB), ULB-VUB, Brussels, Belgium ecilia@ulb.ac.be","institution_ids":["https://openalex.org/I132053463","https://openalex.org/I4210139176"]},{"raw_affiliation_string":"Interuniversity Institute of Bioinformatics in Brussels (IB2), ULB-VUB, Brussels, Belgium","institution_ids":[]},{"raw_affiliation_string":"MLG, Computer Science Department, Universit\u00e9 Libre de Bruxelles (ULB), Brussels, Belgium","institution_ids":["https://openalex.org/I132053463"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060105431","display_name":"Rita Pancsa","orcid":"https://orcid.org/0000-0003-0849-9312"},"institutions":[{"id":"https://openalex.org/I13469542","display_name":"Vrije Universiteit Brussel","ror":"https://ror.org/006e5kg04","country_code":"BE","type":"education","lineage":["https://openalex.org/I13469542"]},{"id":"https://openalex.org/I4210140355","display_name":"VIB-VUB Center for Structural Biology","ror":"https://ror.org/03e84cm85","country_code":"BE","type":"facility","lineage":["https://openalex.org/I13469542","https://openalex.org/I2802017950","https://openalex.org/I4210140355"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Rita Pancsa","raw_affiliation_strings":["Structural Biology Brussels, Vrije Universiteit Brussel (VUB), Brussels, Belgium Department of Structural Biology, VIB, Brussels, Belgium","Department of Structural Biology, VIB, Brussels, Belgium","Structural Biology Brussels, Vrije Universiteit Brussel (VUB), Brussels, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Structural Biology Brussels, Vrije Universiteit Brussel (VUB), Brussels, Belgium Department of Structural Biology, VIB, Brussels, Belgium","institution_ids":["https://openalex.org/I13469542","https://openalex.org/I4210140355"]},{"raw_affiliation_string":"Department of Structural Biology, VIB, Brussels, Belgium","institution_ids":["https://openalex.org/I4210140355"]},{"raw_affiliation_string":"Structural Biology Brussels, Vrije Universiteit Brussel (VUB), Brussels, Belgium","institution_ids":["https://openalex.org/I13469542"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012441798","display_name":"P\u00e9ter Tompa","orcid":"https://orcid.org/0000-0001-8042-9939"},"institutions":[{"id":"https://openalex.org/I13469542","display_name":"Vrije Universiteit Brussel","ror":"https://ror.org/006e5kg04","country_code":"BE","type":"education","lineage":["https://openalex.org/I13469542"]},{"id":"https://openalex.org/I4210140355","display_name":"VIB-VUB Center for Structural Biology","ror":"https://ror.org/03e84cm85","country_code":"BE","type":"facility","lineage":["https://openalex.org/I13469542","https://openalex.org/I2802017950","https://openalex.org/I4210140355"]},{"id":"https://openalex.org/I4210151515","display_name":"Institute of Molecular Life Sciences","ror":"https://ror.org/04t4pws42","country_code":"HU","type":"facility","lineage":["https://openalex.org/I4210151515","https://openalex.org/I4387152226","https://openalex.org/I80251312"]},{"id":"https://openalex.org/I7597260","display_name":"Hungarian Academy of Sciences","ror":"https://ror.org/02ks8qq67","country_code":"HU","type":"government","lineage":["https://openalex.org/I7597260"]},{"id":"https://openalex.org/I80251312","display_name":"HUN-REN Research Centre for Natural Sciences","ror":"https://ror.org/03zwxja46","country_code":"HU","type":"facility","lineage":["https://openalex.org/I4387152226","https://openalex.org/I80251312"]}],"countries":["BE","HU"],"is_corresponding":false,"raw_author_name":"Peter Tompa","raw_affiliation_strings":["Interuniversity Institute of Bioinformatics in Brussels (IB), ULB-VUB, Brussels, Belgium Structural Biology Brussels, Vrije Universiteit Brussel (VUB), Brussels, Belgium Department of Structural Biology, VIB, Brussels, Belgium Institute of Enzymology, Research Centre for Natural Sciences, Hungarian Academy of Sciences, Budapest, Hungary","Department of Structural Biology, VIB, Brussels, Belgium","Institute of Enzymology, Research Centre for Natural Sciences, Hungarian Academy of Sciences, Budapest, Hungary","Interuniversity Institute of Bioinformatics in Brussels (IB2), ULB-VUB, Brussels, Belgium","Structural Biology Brussels, Vrije Universiteit Brussel (VUB), Brussels, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Interuniversity Institute of Bioinformatics in Brussels (IB), ULB-VUB, Brussels, Belgium Structural Biology Brussels, Vrije Universiteit Brussel (VUB), Brussels, Belgium Department of Structural Biology, VIB, Brussels, Belgium Institute of Enzymology, Research Centre for Natural Sciences, Hungarian Academy of Sciences, Budapest, Hungary","institution_ids":["https://openalex.org/I4210140355"]},{"raw_affiliation_string":"Department of Structural Biology, VIB, Brussels, Belgium","institution_ids":["https://openalex.org/I4210140355"]},{"raw_affiliation_string":"Institute of Enzymology, Research Centre for Natural Sciences, Hungarian Academy of Sciences, Budapest, Hungary","institution_ids":["https://openalex.org/I4210151515","https://openalex.org/I7597260","https://openalex.org/I80251312"]},{"raw_affiliation_string":"Interuniversity Institute of Bioinformatics in Brussels (IB2), ULB-VUB, Brussels, Belgium","institution_ids":[]},{"raw_affiliation_string":"Structural Biology Brussels, Vrije Universiteit Brussel (VUB), Brussels, Belgium","institution_ids":["https://openalex.org/I13469542"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003581663","display_name":"Tom Lenaerts","orcid":"https://orcid.org/0000-0003-3645-1455"},"institutions":[{"id":"https://openalex.org/I132053463","display_name":"Universit\u00e9 Libre de Bruxelles","ror":"https://ror.org/01r9htc13","country_code":"BE","type":"education","lineage":["https://openalex.org/I132053463"]},{"id":"https://openalex.org/I13469542","display_name":"Vrije Universiteit Brussel","ror":"https://ror.org/006e5kg04","country_code":"BE","type":"education","lineage":["https://openalex.org/I13469542"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Tom Lenaerts","raw_affiliation_strings":["MLG, Computer Science Department, Universit\u00e9 Libre de Bruxelles (ULB), Brussels, Belgium Interuniversity Institute of Bioinformatics in Brussels (IB), ULB-VUB, Brussels, Belgium AI-Lab, Computer Science Department, Vrije Universiteit Brussel, Brussels, Belgium","AI-Lab, Computer Science Department, Vrije Universiteit Brussel, Brussels, Belgium","Interuniversity Institute of Bioinformatics in Brussels (IB2), ULB-VUB, Brussels, Belgium","MLG, Computer Science Department, Universit\u00e9 Libre de Bruxelles (ULB), Brussels, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"MLG, Computer Science Department, Universit\u00e9 Libre de Bruxelles (ULB), Brussels, Belgium Interuniversity Institute of Bioinformatics in Brussels (IB), ULB-VUB, Brussels, Belgium AI-Lab, Computer Science Department, Vrije Universiteit Brussel, Brussels, Belgium","institution_ids":["https://openalex.org/I132053463","https://openalex.org/I13469542"]},{"raw_affiliation_string":"AI-Lab, Computer Science Department, Vrije Universiteit Brussel, Brussels, Belgium","institution_ids":["https://openalex.org/I13469542"]},{"raw_affiliation_string":"Interuniversity Institute of Bioinformatics in Brussels (IB2), ULB-VUB, Brussels, Belgium","institution_ids":[]},{"raw_affiliation_string":"MLG, Computer Science Department, Universit\u00e9 Libre de Bruxelles (ULB), Brussels, Belgium","institution_ids":["https://openalex.org/I132053463"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5050454940","display_name":"Wim Vranken","orcid":"https://orcid.org/0000-0001-7470-4324"},"institutions":[{"id":"https://openalex.org/I13469542","display_name":"Vrije Universiteit Brussel","ror":"https://ror.org/006e5kg04","country_code":"BE","type":"education","lineage":["https://openalex.org/I13469542"]},{"id":"https://openalex.org/I4210140355","display_name":"VIB-VUB Center for Structural Biology","ror":"https://ror.org/03e84cm85","country_code":"BE","type":"facility","lineage":["https://openalex.org/I13469542","https://openalex.org/I2802017950","https://openalex.org/I4210140355"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Wim F. Vranken","raw_affiliation_strings":["Interuniversity Institute of Bioinformatics in Brussels (IB), ULB-VUB, Brussels, Belgium Structural Biology Brussels, Vrije Universiteit Brussel (VUB), Brussels, Belgium Department of Structural Biology, VIB, Brussels, Belgium","Department of Structural Biology, VIB, Brussels, Belgium","Interuniversity Institute of Bioinformatics in Brussels (IB2), ULB-VUB, Brussels, Belgium","Structural Biology Brussels, Vrije Universiteit Brussel (VUB), Brussels, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Interuniversity Institute of Bioinformatics in Brussels (IB), ULB-VUB, Brussels, Belgium Structural Biology Brussels, Vrije Universiteit Brussel (VUB), Brussels, Belgium Department of Structural Biology, VIB, Brussels, Belgium","institution_ids":["https://openalex.org/I4210140355"]},{"raw_affiliation_string":"Department of Structural Biology, VIB, Brussels, Belgium","institution_ids":["https://openalex.org/I4210140355"]},{"raw_affiliation_string":"Interuniversity Institute of Bioinformatics in Brussels (IB2), ULB-VUB, Brussels, Belgium","institution_ids":[]},{"raw_affiliation_string":"Structural Biology Brussels, Vrije Universiteit Brussel (VUB), Brussels, Belgium","institution_ids":["https://openalex.org/I13469542"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5072420259"],"corresponding_institution_ids":["https://openalex.org/I132053463","https://openalex.org/I4210139176"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":3.5092,"has_fulltext":false,"cited_by_count":167,"citation_normalized_percentile":{"value":0.93756657,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"42","issue":"W1","first_page":"W264","last_page":"W270"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7479562759399414},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.7469288110733032},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5799292922019958},{"id":"https://openalex.org/keywords/protein-function","display_name":"Protein function","score":0.5561827421188354},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.5193668007850647},{"id":"https://openalex.org/keywords/protein-dynamics","display_name":"Protein dynamics","score":0.4379364252090454},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.43394070863723755},{"id":"https://openalex.org/keywords/molecular-dynamics","display_name":"Molecular dynamics","score":0.4273817837238312},{"id":"https://openalex.org/keywords/binary-number","display_name":"Binary number","score":0.41353705525398254},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.3452202081680298},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.34364089369773865},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.34318095445632935},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.20668882131576538},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.13721367716789246},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1268724799156189},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.12015366554260254},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.09696918725967407},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.08780646324157715}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7479562759399414},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.7469288110733032},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5799292922019958},{"id":"https://openalex.org/C2986374874","wikidata":"https://www.wikidata.org/wiki/Q8054","display_name":"Protein function","level":3,"score":0.5561827421188354},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.5193668007850647},{"id":"https://openalex.org/C2775981520","wikidata":"https://www.wikidata.org/wiki/Q17156992","display_name":"Protein dynamics","level":3,"score":0.4379364252090454},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.43394070863723755},{"id":"https://openalex.org/C59593255","wikidata":"https://www.wikidata.org/wiki/Q901663","display_name":"Molecular dynamics","level":2,"score":0.4273817837238312},{"id":"https://openalex.org/C48372109","wikidata":"https://www.wikidata.org/wiki/Q3913","display_name":"Binary number","level":2,"score":0.41353705525398254},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.3452202081680298},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.34364089369773865},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.34318095445632935},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.20668882131576538},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.13721367716789246},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1268724799156189},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.12015366554260254},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.09696918725967407},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.08780646324157715},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C94375191","wikidata":"https://www.wikidata.org/wiki/Q11205","display_name":"Arithmetic","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gku270","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gku270","pdf_url":"https://academic.oup.com/nar/article-pdf/42/W1/W264/7432466/gku270.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:24728994","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24728994","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:dipot.ulb.ac.be:2013/186420","is_oa":true,"landing_page_url":"http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/186420","pdf_url":null,"source":{"id":"https://openalex.org/S4306401063","display_name":"D\u00e9p\u00f4t institutionnel de l'Universit\u00e9 libre de Bruxelles (Universit\u00e9 Libre de Bruxelles)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I132053463","host_organization_name":"Universit\u00e9 Libre de Bruxelles","host_organization_lineage":["https://openalex.org/I132053463"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic acids research, 42","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:europepmc.org:3176821","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4086073","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gku270","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gku270","pdf_url":"https://academic.oup.com/nar/article-pdf/42/W1/W264/7432466/gku270.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W2137974866.pdf"},"referenced_works_count":27,"referenced_works":["https://openalex.org/W1977045164","https://openalex.org/W1977157176","https://openalex.org/W1996446367","https://openalex.org/W1997477098","https://openalex.org/W2006192061","https://openalex.org/W2008708467","https://openalex.org/W2016170088","https://openalex.org/W2037704831","https://openalex.org/W2085559826","https://openalex.org/W2094352784","https://openalex.org/W2100804126","https://openalex.org/W2101419752","https://openalex.org/W2102818658","https://openalex.org/W2107677817","https://openalex.org/W2115802401","https://openalex.org/W2126103104","https://openalex.org/W2127921600","https://openalex.org/W2130479394","https://openalex.org/W2133179696","https://openalex.org/W2149472608","https://openalex.org/W2156407548","https://openalex.org/W2156465034","https://openalex.org/W2170563234","https://openalex.org/W2242536402","https://openalex.org/W2605068739","https://openalex.org/W4229743141","https://openalex.org/W6649342603"],"related_works":["https://openalex.org/W2772226369","https://openalex.org/W2027077329","https://openalex.org/W3116784128","https://openalex.org/W2145118195","https://openalex.org/W3131724274","https://openalex.org/W2155648172","https://openalex.org/W2378801510","https://openalex.org/W2107326055","https://openalex.org/W2290574198","https://openalex.org/W3118344282"],"abstract_inverted_index":{"Protein":[0],"dynamics":[1,11,79],"are":[2,119],"important":[3],"for":[4,26,47,77,99],"understanding":[5],"protein":[6,10,82,106],"function.":[7],"Unfortunately,":[8],"accurate":[9],"information":[12],"is":[13,138],"difficult":[14],"to":[15,96],"obtain:":[16],"here":[17],"we":[18,87],"present":[19],"the":[20,27,44,65,101,111,133,136],"DynaMine":[21,38,127],"webserver,":[22,86,128],"which":[23],"provides":[24],"predictions":[25],"fast":[28],"backbone":[29],"movements":[30,49],"of":[31,69,104,107,113,135],"proteins":[32],"directly":[33,124],"from":[34],"their":[35],"amino-acid":[36],"sequence.":[37],"rapidly":[39],"produces":[40],"a":[41],"profile":[42],"describing":[43,132],"statistical":[45],"potential":[46],"such":[48],"at":[50,140],"residue-level":[51],"resolution.":[52],"The":[53,116,126],"predicted":[54],"values":[55],"have":[56],"meaning":[57,134],"on":[58],"an":[59,92],"absolute":[60],"scale":[61],"and":[62,94,121],"go":[63],"beyond":[64],"traditional":[66],"binary":[67],"classification":[68],"residues":[70],"as":[71],"ordered":[72],"or":[73],"disordered,":[74],"thus":[75],"allowing":[76],"direct":[78],"comparisons":[80],"between":[81],"regions.":[83],"Through":[84],"this":[85],"provide":[88],"molecular":[89],"biologists":[90],"with":[91],"efficient":[93],"easy":[95],"use":[97],"tool":[98],"predicting":[100],"dynamical":[102],"characteristics":[103],"any":[105],"interest,":[108],"even":[109],"in":[110],"absence":[112],"experimental":[114],"observations.":[115],"prediction":[117],"results":[118],"visualized":[120],"can":[122],"be":[123],"downloaded.":[125],"including":[129],"instructive":[130],"examples":[131],"profiles,":[137],"available":[139],"http://dynamine.ibsquare.be.":[141]},"counts_by_year":[{"year":2026,"cited_by_count":6},{"year":2025,"cited_by_count":13},{"year":2024,"cited_by_count":15},{"year":2023,"cited_by_count":13},{"year":2022,"cited_by_count":29},{"year":2021,"cited_by_count":25},{"year":2020,"cited_by_count":15},{"year":2019,"cited_by_count":12},{"year":2018,"cited_by_count":12},{"year":2017,"cited_by_count":8},{"year":2016,"cited_by_count":10},{"year":2015,"cited_by_count":7},{"year":2014,"cited_by_count":2}],"updated_date":"2026-07-30T17:31:21.811387","created_date":"2025-10-10T00:00:00"}
