{"id":"https://openalex.org/W2123887743","doi":"https://doi.org/10.1093/nar/gku1241","title":"The 2015 <i>Nucleic Acids Research</i> Database Issue and Molecular Biology Database Collection","display_name":"The 2015 <i>Nucleic Acids Research</i> Database Issue and Molecular Biology Database Collection","publication_year":2015,"publication_date":"2015-01-15","ids":{"openalex":"https://openalex.org/W2123887743","doi":"https://doi.org/10.1093/nar/gku1241","mag":"2123887743","pmid":"https://pubmed.ncbi.nlm.nih.gov/25593347"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gku1241","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gku1241","pdf_url":"https://academic.oup.com/nar/article-pdf/43/D1/D1/45844791/nar_43_d1_d1.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/43/D1/D1/45844791/nar_43_d1_d1.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5077552473","display_name":"Michael Y. Galperin","orcid":"https://orcid.org/0000-0002-2265-5572"},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]},{"id":"https://openalex.org/I4210109390","display_name":"National Center for Biotechnology Information","ror":"https://ror.org/02meqm098","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I2800548410","https://openalex.org/I4210109390"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Michael Y. Galperin","raw_affiliation_strings":["1National Center for Biotechnology Information (NCBI), National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA"],"affiliations":[{"raw_affiliation_string":"1National Center for Biotechnology Information (NCBI), National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA","institution_ids":["https://openalex.org/I4210109390","https://openalex.org/I1299303238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009636964","display_name":"Daniel J. Rigden","orcid":"https://orcid.org/0000-0002-7565-8937"},"institutions":[{"id":"https://openalex.org/I146655781","display_name":"University of Liverpool","ror":"https://ror.org/04xs57h96","country_code":"GB","type":"education","lineage":["https://openalex.org/I146655781"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Daniel J. Rigden","raw_affiliation_strings":["2Institute of Integrative Biology, University of Liverpool, Crown Street, Liverpool L69 7ZB, UK","Institute of Integrative Biology, University of Liverpool, Crown Street, Liverpool, L69 7ZB, UK;"],"affiliations":[{"raw_affiliation_string":"2Institute of Integrative Biology, University of Liverpool, Crown Street, Liverpool L69 7ZB, UK","institution_ids":["https://openalex.org/I146655781"]},{"raw_affiliation_string":"Institute of Integrative Biology, University of Liverpool, Crown Street, Liverpool, L69 7ZB, UK;","institution_ids":["https://openalex.org/I146655781"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5014883542","display_name":"Xos\u00e9 M. Fern\u00e1ndez","orcid":"https://orcid.org/0000-0001-7139-6215"},"institutions":[{"id":"https://openalex.org/I4210126472","display_name":"Thermo Fisher Scientific (United Kingdom)","ror":"https://ror.org/03bndes49","country_code":"GB","type":"company","lineage":["https://openalex.org/I4210126472","https://openalex.org/I4210142480"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Xos\u00e9 M. Fern\u00e1ndez-Su\u00e1rez","raw_affiliation_strings":["3Thermo Fisher Scientific, Inchinnan Business Park, Paisley, Renfrew PA4 9RF, UK","Thermo Fisher Scientific, Inchinnan Business Park, Paisley, Renfrew PA4 9RF, UK"],"affiliations":[{"raw_affiliation_string":"3Thermo Fisher Scientific, Inchinnan Business Park, Paisley, Renfrew PA4 9RF, UK","institution_ids":["https://openalex.org/I4210126472"]},{"raw_affiliation_string":"Thermo Fisher Scientific, Inchinnan Business Park, Paisley, Renfrew PA4 9RF, UK","institution_ids":["https://openalex.org/I4210126472"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5077552473"],"corresponding_institution_ids":["https://openalex.org/I1299303238","https://openalex.org/I4210109390"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":7.3807,"has_fulltext":true,"cited_by_count":71,"citation_normalized_percentile":{"value":0.97868454,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"43","issue":"D1","first_page":"D1","last_page":"D5"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.8447213768959045},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6773715019226074},{"id":"https://openalex.org/keywords/biological-database","display_name":"Biological database","score":0.5193504095077515},{"id":"https://openalex.org/keywords/online-database","display_name":"Online database","score":0.5098673105239868},{"id":"https://openalex.org/keywords/nucleic-acid","display_name":"Nucleic acid","score":0.48321664333343506},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3572770953178406},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3364843428134918},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.2489449679851532},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.16716423630714417}],"concepts":[{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.8447213768959045},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6773715019226074},{"id":"https://openalex.org/C20901353","wikidata":"https://www.wikidata.org/wiki/Q4117139","display_name":"Biological database","level":2,"score":0.5193504095077515},{"id":"https://openalex.org/C2777715827","wikidata":"https://www.wikidata.org/wiki/Q7094076","display_name":"Online database","level":2,"score":0.5098673105239868},{"id":"https://openalex.org/C24107716","wikidata":"https://www.wikidata.org/wiki/Q123619","display_name":"Nucleic acid","level":2,"score":0.48321664333343506},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3572770953178406},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3364843428134918},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.2489449679851532},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.16716423630714417}],"mesh":[{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gku1241","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gku1241","pdf_url":"https://academic.oup.com/nar/article-pdf/43/D1/D1/45844791/nar_43_d1_d1.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:25593347","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25593347","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:europepmc.org:3370094","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4383995","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:europepmc.org:3680848","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4702933","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gku1241","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gku1241","pdf_url":"https://academic.oup.com/nar/article-pdf/43/D1/D1/45844791/nar_43_d1_d1.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Partnerships for the goals","score":0.5,"id":"https://metadata.un.org/sdg/17"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320320290","display_name":"University of Oxford","ror":"https://ror.org/052gg0110"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2123887743.pdf","grobid_xml":"https://content.openalex.org/works/W2123887743.grobid-xml"},"referenced_works_count":52,"referenced_works":["https://openalex.org/W1187995737","https://openalex.org/W1992442866","https://openalex.org/W1998490996","https://openalex.org/W2004622806","https://openalex.org/W2004707197","https://openalex.org/W2006619391","https://openalex.org/W2027278749","https://openalex.org/W2030530458","https://openalex.org/W2065258371","https://openalex.org/W2079561996","https://openalex.org/W2087162578","https://openalex.org/W2090559761","https://openalex.org/W2091001933","https://openalex.org/W2095926488","https://openalex.org/W2097523781","https://openalex.org/W2100301244","https://openalex.org/W2101375662","https://openalex.org/W2102344709","https://openalex.org/W2103632489","https://openalex.org/W2107505802","https://openalex.org/W2110692190","https://openalex.org/W2113023089","https://openalex.org/W2113139341","https://openalex.org/W2114478923","https://openalex.org/W2117344709","https://openalex.org/W2118151336","https://openalex.org/W2119726708","https://openalex.org/W2120018783","https://openalex.org/W2126103104","https://openalex.org/W2133620956","https://openalex.org/W2134873394","https://openalex.org/W2135155166","https://openalex.org/W2136632285","https://openalex.org/W2139581609","https://openalex.org/W2139994096","https://openalex.org/W2140718072","https://openalex.org/W2143965041","https://openalex.org/W2147526198","https://openalex.org/W2147814423","https://openalex.org/W2153544371","https://openalex.org/W2156576646","https://openalex.org/W2157122545","https://openalex.org/W2158847524","https://openalex.org/W2162151166","https://openalex.org/W2162528766","https://openalex.org/W2164461702","https://openalex.org/W2165324851","https://openalex.org/W2283455038","https://openalex.org/W2739999456","https://openalex.org/W2917738795","https://openalex.org/W4247447075","https://openalex.org/W4255594044"],"related_works":["https://openalex.org/W4312158493","https://openalex.org/W2033835987","https://openalex.org/W4248750016","https://openalex.org/W4205092877","https://openalex.org/W4243839507","https://openalex.org/W1824784554","https://openalex.org/W2048912770","https://openalex.org/W2113503643","https://openalex.org/W2123887743","https://openalex.org/W1503231262"],"abstract_inverted_index":{"The":[0,145,173],"2015":[1],"Nucleic":[2,183],"Acids":[3,184],"Research":[4,185],"Database":[5,152,175],"Issue":[6,176],"contains":[7],"172":[8],"papers":[9],"that":[10,38],"include":[11,64],"descriptions":[12,25],"of":[13,49,94,101,108,127,137,147,162,168],"56":[14],"new":[15,106,164],"molecular":[16],"biology":[17],"databases,":[18],"and":[19,83,104,110,115,130,139,142,166],"updates":[20],"on":[21,73,181],"115":[22],"databases":[23,72,107,129,132],"whose":[24],"have":[26],"been":[27,40],"previously":[28],"published":[29],"in":[30,44],"NAR":[31,148],"or":[32],"other":[33,111,131],"journals.":[34],"Following":[35],"the":[36,50,116,157,160,182],"classification":[37],"has":[39],"introduced":[41],"last":[42],"year":[43],"order":[45],"to":[46,70,134],"simplify":[47],"navigation":[48],"entire":[51,174],"issue,":[52],"these":[53],"articles":[54],"are":[55],"divided":[56],"into":[57],"eight":[58],"subject":[59],"categories.":[60],"This":[61,119],"year's":[62],"highlights":[63],"RNAcentral,":[65],"an":[66,123],"international":[67],"community":[68],"portal":[69],"various":[71,95],"noncoding":[74],"RNA;":[75],"ValidatorDB,":[76],"a":[77,87,99],"validation":[78],"database":[79,100],"for":[80,90],"protein":[81],"structures":[82],"their":[84],"ligands;":[85],"SASBDB,":[86],"primary":[88],"repository":[89],"small-angle":[91],"scattering":[92],"data":[93],"macromolecular":[96,112],"complexes;":[97],"MoonProt,":[98],"'moonlighting'":[102],"proteins,":[103],"two":[105],"protein-protein":[109],"complexes,":[113],"ComPPI":[114],"Complex":[117],"Portal.":[118],"issue":[120],"also":[121],"includes":[122],"unusually":[124],"high":[125],"number":[126],"cancer-related":[128],"dedicated":[133],"genomic":[135],"basics":[136],"disease":[138],"potential":[140],"drugs":[141],"drug":[143],"targets.":[144],"size":[146],"online":[149,180],"Molecular":[150],"Biology":[151],"Collection,":[153],"http://www.oxfordjournals.org/nar/database/a/,":[154],"remained":[155],"approximately":[156],"same,":[158],"following":[159],"addition":[161],"74":[163],"resources":[165],"removal":[167],"77":[169],"obsolete":[170],"web":[171,186],"sites.":[172],"is":[177],"freely":[178],"available":[179],"site":[187],"(http://nar.oxfordjournals.org/).":[188]},"counts_by_year":[{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":9},{"year":2018,"cited_by_count":7},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":19},{"year":2015,"cited_by_count":20}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2016-06-24T00:00:00"}
