{"id":"https://openalex.org/W2118074313","doi":"https://doi.org/10.1093/nar/gku1142","title":"SuperFly: a comparative database for quantified spatio-temporal gene expression patterns in early dipteran embryos","display_name":"SuperFly: a comparative database for quantified spatio-temporal gene expression patterns in early dipteran embryos","publication_year":2014,"publication_date":"2014-11-17","ids":{"openalex":"https://openalex.org/W2118074313","doi":"https://doi.org/10.1093/nar/gku1142","mag":"2118074313","pmid":"https://pubmed.ncbi.nlm.nih.gov/25404137"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gku1142","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gku1142","pdf_url":"https://academic.oup.com/nar/article-pdf/43/D1/D751/7321216/gku1142.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/43/D1/D751/7321216/gku1142.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5002873993","display_name":"Damjan Cicin-Sain","orcid":null},"institutions":[{"id":"https://openalex.org/I4210137962","display_name":"Centre for Genomic Regulation","ror":"https://ror.org/03wyzt892","country_code":"ES","type":"funder","lineage":["https://openalex.org/I4210132884","https://openalex.org/I4210137962","https://openalex.org/I4387153040"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Damjan Cicin-Sain","raw_affiliation_strings":["EMBL/CRG Research Unit in Systems Biology, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","EMBL/CRG Research Unit in Systems Biology, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"EMBL/CRG Research Unit in Systems Biology, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","institution_ids":[]},{"raw_affiliation_string":"EMBL/CRG Research Unit in Systems Biology, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","institution_ids":["https://openalex.org/I4210137962"]},{"raw_affiliation_string":"Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","institution_ids":["https://openalex.org/I4210137962"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081314775","display_name":"Antonio Hermoso","orcid":"https://orcid.org/0000-0003-2016-6465"},"institutions":[{"id":"https://openalex.org/I4210137962","display_name":"Centre for Genomic Regulation","ror":"https://ror.org/03wyzt892","country_code":"ES","type":"funder","lineage":["https://openalex.org/I4210132884","https://openalex.org/I4210137962","https://openalex.org/I4387153040"]},{"id":"https://openalex.org/I170486558","display_name":"Pompeu Fabra University","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Antonio Hermoso Pulido","raw_affiliation_strings":["Universitat Pompeu Fabra (UPF), 08002 Barcelona, Spain Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","Universitat Pompeu Fabra (UPF), 08002 Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"Universitat Pompeu Fabra (UPF), 08002 Barcelona, Spain Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","institution_ids":[]},{"raw_affiliation_string":"Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","institution_ids":["https://openalex.org/I4210137962"]},{"raw_affiliation_string":"Universitat Pompeu Fabra (UPF), 08002 Barcelona, Spain","institution_ids":["https://openalex.org/I170486558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012212547","display_name":"Anton Crombach","orcid":"https://orcid.org/0000-0002-2889-5120"},"institutions":[{"id":"https://openalex.org/I4210137962","display_name":"Centre for Genomic Regulation","ror":"https://ror.org/03wyzt892","country_code":"ES","type":"funder","lineage":["https://openalex.org/I4210132884","https://openalex.org/I4210137962","https://openalex.org/I4387153040"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Anton Crombach","raw_affiliation_strings":["EMBL/CRG Research Unit in Systems Biology, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","EMBL/CRG Research Unit in Systems Biology, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"EMBL/CRG Research Unit in Systems Biology, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","institution_ids":[]},{"raw_affiliation_string":"Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","institution_ids":["https://openalex.org/I4210137962"]},{"raw_affiliation_string":"EMBL/CRG Research Unit in Systems Biology, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","institution_ids":["https://openalex.org/I4210137962"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077715617","display_name":"Karl R. Wotton","orcid":"https://orcid.org/0000-0002-8672-9948"},"institutions":[{"id":"https://openalex.org/I4210137962","display_name":"Centre for Genomic Regulation","ror":"https://ror.org/03wyzt892","country_code":"ES","type":"funder","lineage":["https://openalex.org/I4210132884","https://openalex.org/I4210137962","https://openalex.org/I4387153040"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Karl R. Wotton","raw_affiliation_strings":["EMBL/CRG Research Unit in Systems Biology, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","EMBL/CRG Research Unit in Systems Biology, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"EMBL/CRG Research Unit in Systems Biology, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","institution_ids":[]},{"raw_affiliation_string":"Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","institution_ids":["https://openalex.org/I4210137962"]},{"raw_affiliation_string":"EMBL/CRG Research Unit in Systems Biology, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","institution_ids":["https://openalex.org/I4210137962"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023562286","display_name":"Eva Jim\u00e9nez-Guri","orcid":"https://orcid.org/0000-0002-9592-1077"},"institutions":[{"id":"https://openalex.org/I4210137962","display_name":"Centre for Genomic Regulation","ror":"https://ror.org/03wyzt892","country_code":"ES","type":"funder","lineage":["https://openalex.org/I4210132884","https://openalex.org/I4210137962","https://openalex.org/I4387153040"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Eva Jim\u00e9nez-Guri","raw_affiliation_strings":["EMBL/CRG Research Unit in Systems Biology, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","EMBL/CRG Research Unit in Systems Biology, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"EMBL/CRG Research Unit in Systems Biology, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","institution_ids":[]},{"raw_affiliation_string":"EMBL/CRG Research Unit in Systems Biology, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","institution_ids":["https://openalex.org/I4210137962"]},{"raw_affiliation_string":"Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","institution_ids":["https://openalex.org/I4210137962"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037731189","display_name":"Jean-Fran\u00e7ois Taly","orcid":"https://orcid.org/0000-0002-2471-2032"},"institutions":[{"id":"https://openalex.org/I170486558","display_name":"Pompeu Fabra University","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]},{"id":"https://openalex.org/I4210137962","display_name":"Centre for Genomic Regulation","ror":"https://ror.org/03wyzt892","country_code":"ES","type":"funder","lineage":["https://openalex.org/I4210132884","https://openalex.org/I4210137962","https://openalex.org/I4387153040"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Jean-Fran\u00e7ois Taly","raw_affiliation_strings":["Universitat Pompeu Fabra (UPF), 08002 Barcelona, Spain Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","Universitat Pompeu Fabra (UPF), 08002 Barcelona, Spain","Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"Universitat Pompeu Fabra (UPF), 08002 Barcelona, Spain Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","institution_ids":[]},{"raw_affiliation_string":"Universitat Pompeu Fabra (UPF), 08002 Barcelona, Spain","institution_ids":["https://openalex.org/I170486558"]},{"raw_affiliation_string":"Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","institution_ids":["https://openalex.org/I4210137962"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013224356","display_name":"Guglielmo Roma","orcid":"https://orcid.org/0000-0002-8020-4219"},"institutions":[{"id":"https://openalex.org/I170486558","display_name":"Pompeu Fabra University","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]},{"id":"https://openalex.org/I4210137962","display_name":"Centre for Genomic Regulation","ror":"https://ror.org/03wyzt892","country_code":"ES","type":"funder","lineage":["https://openalex.org/I4210132884","https://openalex.org/I4210137962","https://openalex.org/I4387153040"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Guglielmo Roma","raw_affiliation_strings":["Universitat Pompeu Fabra (UPF), 08002 Barcelona, Spain Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","Universitat Pompeu Fabra (UPF), 08002 Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"Universitat Pompeu Fabra (UPF), 08002 Barcelona, Spain Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","institution_ids":[]},{"raw_affiliation_string":"Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","institution_ids":["https://openalex.org/I4210137962"]},{"raw_affiliation_string":"Universitat Pompeu Fabra (UPF), 08002 Barcelona, Spain","institution_ids":["https://openalex.org/I170486558"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5008115010","display_name":"Johannes Jaeger","orcid":"https://orcid.org/0000-0002-2568-2103"},"institutions":[{"id":"https://openalex.org/I4210137962","display_name":"Centre for Genomic Regulation","ror":"https://ror.org/03wyzt892","country_code":"ES","type":"funder","lineage":["https://openalex.org/I4210132884","https://openalex.org/I4210137962","https://openalex.org/I4387153040"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Johannes Jaeger","raw_affiliation_strings":["EMBL/CRG Research Unit in Systems Biology, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain yogi.jaeger@crg.eu","Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","EMBL/CRG Research Unit in Systems Biology, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"EMBL/CRG Research Unit in Systems Biology, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain yogi.jaeger@crg.eu","institution_ids":[]},{"raw_affiliation_string":"Bioinformatics Core Facility, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","institution_ids":["https://openalex.org/I4210137962"]},{"raw_affiliation_string":"EMBL/CRG Research Unit in Systems Biology, Centre for Genomic Regulation (CRG), 08003 Barcelona, Spain","institution_ids":["https://openalex.org/I4210137962"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5008115010"],"corresponding_institution_ids":["https://openalex.org/I4210137962"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":1.9965,"has_fulltext":false,"cited_by_count":21,"citation_normalized_percentile":{"value":0.86583486,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"43","issue":"D1","first_page":"D751","last_page":"D755"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9930999875068665,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9930999875068665,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9736999869346619,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11075","display_name":"Insect Resistance and Genetics","score":0.9599999785423279,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.9249622225761414},{"id":"https://openalex.org/keywords/drosophila-melanogaster","display_name":"Drosophila melanogaster","score":0.6695209741592407},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.47043272852897644},{"id":"https://openalex.org/keywords/model-organism","display_name":"Model organism","score":0.4642888307571411},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4274347722530365},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4037390351295471},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.20555880665779114},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.11835044622421265}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.9249622225761414},{"id":"https://openalex.org/C2780104201","wikidata":"https://www.wikidata.org/wiki/Q130888","display_name":"Drosophila melanogaster","level":3,"score":0.6695209741592407},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.47043272852897644},{"id":"https://openalex.org/C19843653","wikidata":"https://www.wikidata.org/wiki/Q213907","display_name":"Model organism","level":3,"score":0.4642888307571411},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4274347722530365},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4037390351295471},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.20555880665779114},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.11835044622421265}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004175","descriptor_name":"Diptera","qualifier_ui":"Q000196","qualifier_name":"embryology","is_major_topic":false},{"descriptor_ui":"D004175","descriptor_name":"Diptera","qualifier_ui":"Q000196","qualifier_name":"embryology","is_major_topic":false},{"descriptor_ui":"D004175","descriptor_name":"Diptera","qualifier_ui":"Q000196","qualifier_name":"embryology","is_major_topic":false},{"descriptor_ui":"D004175","descriptor_name":"Diptera","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004175","descriptor_name":"Diptera","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004175","descriptor_name":"Diptera","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004175","descriptor_name":"Diptera","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004175","descriptor_name":"Diptera","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004175","descriptor_name":"Diptera","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004331","descriptor_name":"Drosophila melanogaster","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004331","descriptor_name":"Drosophila melanogaster","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004331","descriptor_name":"Drosophila melanogaster","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004625","descriptor_name":"Embryo, Nonmammalian","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004625","descriptor_name":"Embryo, Nonmammalian","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004625","descriptor_name":"Embryo, Nonmammalian","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":6,"locations":[{"id":"doi:10.1093/nar/gku1142","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gku1142","pdf_url":"https://academic.oup.com/nar/article-pdf/43/D1/D751/7321216/gku1142.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:25404137","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25404137","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:ore.exeter.ac.uk:10871/25875","is_oa":true,"landing_page_url":"http://hdl.handle.net/10871/25875","pdf_url":null,"source":{"id":"https://openalex.org/S4306401998","display_name":"Open Research Exeter (University of Exeter)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I23923803","host_organization_name":"University of Exeter","host_organization_lineage":["https://openalex.org/I23923803"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"Article"},{"id":"pmh:oai:repositori.upf.edu:10230/25115","is_oa":true,"landing_page_url":"http://hdl.handle.net/10230/25115","pdf_url":null,"source":{"id":"https://openalex.org/S4306402615","display_name":"Repositori digital de la UPF (Universitat Pompeu Fabra)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I170486558","host_organization_name":"Universitat Pompeu Fabra","host_organization_lineage":["https://openalex.org/I170486558"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:europepmc.org:3354896","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4383950","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:figshare.com:article/29726858","is_oa":true,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Journal contribution"}],"best_oa_location":{"id":"doi:10.1093/nar/gku1142","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gku1142","pdf_url":"https://academic.oup.com/nar/article-pdf/43/D1/D751/7321216/gku1142.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2118074313.pdf","grobid_xml":"https://content.openalex.org/works/W2118074313.grobid-xml"},"referenced_works_count":48,"referenced_works":["https://openalex.org/W225301010","https://openalex.org/W614012683","https://openalex.org/W1509329028","https://openalex.org/W1514300652","https://openalex.org/W1535624577","https://openalex.org/W1781095925","https://openalex.org/W1815472980","https://openalex.org/W1975013924","https://openalex.org/W1991484745","https://openalex.org/W1993352055","https://openalex.org/W1997004754","https://openalex.org/W2003963489","https://openalex.org/W2010712697","https://openalex.org/W2014958740","https://openalex.org/W2015100891","https://openalex.org/W2022397266","https://openalex.org/W2031403252","https://openalex.org/W2035655686","https://openalex.org/W2043056253","https://openalex.org/W2045302752","https://openalex.org/W2048027248","https://openalex.org/W2051561348","https://openalex.org/W2051676319","https://openalex.org/W2059093945","https://openalex.org/W2074294880","https://openalex.org/W2076083354","https://openalex.org/W2082564851","https://openalex.org/W2084025901","https://openalex.org/W2086103112","https://openalex.org/W2086922342","https://openalex.org/W2087906818","https://openalex.org/W2094840051","https://openalex.org/W2100312624","https://openalex.org/W2105293708","https://openalex.org/W2105443877","https://openalex.org/W2114641811","https://openalex.org/W2133068979","https://openalex.org/W2135061355","https://openalex.org/W2135105208","https://openalex.org/W2136373193","https://openalex.org/W2147191250","https://openalex.org/W2149994559","https://openalex.org/W2162979438","https://openalex.org/W2163256056","https://openalex.org/W2168059187","https://openalex.org/W2171018484","https://openalex.org/W4233723707","https://openalex.org/W6779435932"],"related_works":["https://openalex.org/W3013644380","https://openalex.org/W2139780906","https://openalex.org/W184469900","https://openalex.org/W2795702742","https://openalex.org/W1009992280","https://openalex.org/W2421223282","https://openalex.org/W2347107523","https://openalex.org/W3208225243","https://openalex.org/W2970760756","https://openalex.org/W2145665157"],"abstract_inverted_index":{"We":[0],"present":[1],"SuperFly":[2,28,69,121],"(http://superfly.crg.eu),":[3],"a":[4,30,82,123,168],"relational":[5],"database":[6,39],"for":[7,47,127,146,165],"quantified":[8,104],"spatio-temporal":[9,45],"expression":[10,105,110,134],"data":[11,42],"of":[12,21,43,84,109,132,159,174],"segmentation":[13],"genes":[14,74],"during":[15],"early":[16],"development":[17],"in":[18,150],"different":[19],"species":[20],"dipteran":[22,137],"insects":[23],"(flies,":[24],"midges":[25],"and":[26,60,75,99,112,117,171],"mosquitoes).":[27],"has":[29],"special":[31],"focus":[32],"on":[33],"emerging":[34],"non-drosophilid":[35],"model":[36],"systems.":[37],"The":[38],"currently":[40],"includes":[41],"high":[44],"resolution":[46],"three":[48],"species:":[49],"the":[50,55,61,95,128],"vinegar":[51],"fly":[52,57],"Drosophila":[53],"melanogaster,":[54],"scuttle":[56],"Megaselia":[58],"abdita":[59],"moth":[62],"midge":[63],"Clogmia":[64],"albipunctata.":[65],"At":[66],"this":[67],"point,":[68],"covers":[70],"up":[71],"to":[72,97,156],"9":[73],"16":[76],"time":[77],"points":[78],"per":[79],"species,":[80],"with":[81],"total":[83],"1823":[85],"individual":[86],"embryos.":[87],"It":[88],"provides":[89,141],"an":[90,142],"intuitive":[91],"web":[92],"interface,":[93],"enabling":[94],"user":[96],"query":[98],"access":[100],"original":[101],"embryo":[102],"images,":[103],"profiles,":[106],"extracted":[107],"positions":[108],"boundaries":[111],"integrated":[113],"datasets,":[114],"plus":[115],"metadata":[116],"intermediate":[118],"processing":[119],"steps.":[120],"is":[122],"valuable":[124],"new":[125],"resource":[126],"quantitative":[129,170],"comparative":[130],"study":[131],"gene":[133,153],"patterns":[135],"across":[136],"species.":[138],"Moreover,":[139],"it":[140],"interesting":[143],"test":[144],"set":[145],"systems":[147],"biologists":[148],"interested":[149],"fitting":[151],"mathematical":[152],"network":[154],"models":[155],"data.":[157],"Both":[158],"these":[160],"aspects":[161],"are":[162],"essential":[163],"ingredients":[164],"progress":[166],"toward":[167],"more":[169],"mechanistic":[172],"understanding":[173],"developmental":[175],"evolution.":[176]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":9}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}