{"id":"https://openalex.org/W2117527407","doi":"https://doi.org/10.1093/nar/gku1053","title":"AraNet v2: an improved database of co-functional gene networks for the study of Arabidopsis thaliana and 27 other nonmodel plant species","display_name":"AraNet v2: an improved database of co-functional gene networks for the study of Arabidopsis thaliana and 27 other nonmodel plant species","publication_year":2014,"publication_date":"2014-10-29","ids":{"openalex":"https://openalex.org/W2117527407","doi":"https://doi.org/10.1093/nar/gku1053","mag":"2117527407","pmid":"https://pubmed.ncbi.nlm.nih.gov/25355510"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gku1053","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gku1053","pdf_url":"https://academic.oup.com/nar/article-pdf/43/D1/D996/17436102/gku1053.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/43/D1/D996/17436102/gku1053.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5046811254","display_name":"Tak Lee","orcid":"https://orcid.org/0000-0001-7008-7605"},"institutions":[{"id":"https://openalex.org/I193775966","display_name":"Yonsei University","ror":"https://ror.org/01wjejq96","country_code":"KR","type":"education","lineage":["https://openalex.org/I193775966"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Tak Lee","raw_affiliation_strings":["Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, Korea"],"affiliations":[{"raw_affiliation_string":"Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, Korea","institution_ids":["https://openalex.org/I193775966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082946212","display_name":"Sunmo Yang","orcid":null},"institutions":[{"id":"https://openalex.org/I193775966","display_name":"Yonsei University","ror":"https://ror.org/01wjejq96","country_code":"KR","type":"education","lineage":["https://openalex.org/I193775966"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Sunmo Yang","raw_affiliation_strings":["Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, Korea"],"affiliations":[{"raw_affiliation_string":"Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, Korea","institution_ids":["https://openalex.org/I193775966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067280395","display_name":"Eiru Kim","orcid":"https://orcid.org/0000-0002-1901-5670"},"institutions":[{"id":"https://openalex.org/I193775966","display_name":"Yonsei University","ror":"https://ror.org/01wjejq96","country_code":"KR","type":"education","lineage":["https://openalex.org/I193775966"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Eiru Kim","raw_affiliation_strings":["Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, Korea"],"affiliations":[{"raw_affiliation_string":"Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, Korea","institution_ids":["https://openalex.org/I193775966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110511389","display_name":"Younhee Ko","orcid":"https://orcid.org/0000-0002-2843-2222"},"institutions":[{"id":"https://openalex.org/I193775966","display_name":"Yonsei University","ror":"https://ror.org/01wjejq96","country_code":"KR","type":"education","lineage":["https://openalex.org/I193775966"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Younhee Ko","raw_affiliation_strings":["Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, Korea"],"affiliations":[{"raw_affiliation_string":"Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, Korea","institution_ids":["https://openalex.org/I193775966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028639165","display_name":"Sohyun Hwang","orcid":"https://orcid.org/0000-0003-2461-6806"},"institutions":[{"id":"https://openalex.org/I86519309","display_name":"The University of Texas at Austin","ror":"https://ror.org/00hj54h04","country_code":"US","type":"education","lineage":["https://openalex.org/I86519309"]},{"id":"https://openalex.org/I193775966","display_name":"Yonsei University","ror":"https://ror.org/01wjejq96","country_code":"KR","type":"education","lineage":["https://openalex.org/I193775966"]}],"countries":["KR","US"],"is_corresponding":false,"raw_author_name":"Sohyun Hwang","raw_affiliation_strings":["Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, Korea Center for Systems and Synthetic Biology, Institute for Cellular and Molecular Biology, University of Texas at Austin, TX 78712, USA","Center for Systems and Synthetic Biology, Institute for Cellular and Molecular Biology, University of Texas at Austin, TX 78712, USA","Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, Korea"],"affiliations":[{"raw_affiliation_string":"Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, Korea Center for Systems and Synthetic Biology, Institute for Cellular and Molecular Biology, University of Texas at Austin, TX 78712, USA","institution_ids":[]},{"raw_affiliation_string":"Center for Systems and Synthetic Biology, Institute for Cellular and Molecular Biology, University of Texas at Austin, TX 78712, USA","institution_ids":["https://openalex.org/I86519309"]},{"raw_affiliation_string":"Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, Korea","institution_ids":["https://openalex.org/I193775966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049171920","display_name":"Junha Shin","orcid":"https://orcid.org/0000-0003-3175-3446"},"institutions":[{"id":"https://openalex.org/I193775966","display_name":"Yonsei University","ror":"https://ror.org/01wjejq96","country_code":"KR","type":"education","lineage":["https://openalex.org/I193775966"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Junha Shin","raw_affiliation_strings":["Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, Korea"],"affiliations":[{"raw_affiliation_string":"Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, Korea","institution_ids":["https://openalex.org/I193775966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075624025","display_name":"Jung Eun Shim","orcid":"https://orcid.org/0000-0001-6341-9923"},"institutions":[{"id":"https://openalex.org/I193775966","display_name":"Yonsei University","ror":"https://ror.org/01wjejq96","country_code":"KR","type":"education","lineage":["https://openalex.org/I193775966"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Jung Eun Shim","raw_affiliation_strings":["Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, Korea"],"affiliations":[{"raw_affiliation_string":"Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, Korea","institution_ids":["https://openalex.org/I193775966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062569907","display_name":"Hongseok Shim","orcid":null},"institutions":[{"id":"https://openalex.org/I193775966","display_name":"Yonsei University","ror":"https://ror.org/01wjejq96","country_code":"KR","type":"education","lineage":["https://openalex.org/I193775966"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Hongseok Shim","raw_affiliation_strings":["Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, Korea"],"affiliations":[{"raw_affiliation_string":"Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, Korea","institution_ids":["https://openalex.org/I193775966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100439154","display_name":"Hyojin Kim","orcid":"https://orcid.org/0000-0001-7703-5170"},"institutions":[{"id":"https://openalex.org/I193775966","display_name":"Yonsei University","ror":"https://ror.org/01wjejq96","country_code":"KR","type":"education","lineage":["https://openalex.org/I193775966"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Hyojin Kim","raw_affiliation_strings":["Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, Korea"],"affiliations":[{"raw_affiliation_string":"Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, Korea","institution_ids":["https://openalex.org/I193775966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075621908","display_name":"Chanyoung Kim","orcid":"https://orcid.org/0000-0003-2749-8163"},"institutions":[{"id":"https://openalex.org/I193775966","display_name":"Yonsei University","ror":"https://ror.org/01wjejq96","country_code":"KR","type":"education","lineage":["https://openalex.org/I193775966"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Chanyoung Kim","raw_affiliation_strings":["Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, Korea"],"affiliations":[{"raw_affiliation_string":"Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, Korea","institution_ids":["https://openalex.org/I193775966"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5035867403","display_name":"Insuk Lee","orcid":"https://orcid.org/0000-0003-3146-6180"},"institutions":[{"id":"https://openalex.org/I193775966","display_name":"Yonsei University","ror":"https://ror.org/01wjejq96","country_code":"KR","type":"education","lineage":["https://openalex.org/I193775966"]}],"countries":["KR"],"is_corresponding":true,"raw_author_name":"Insuk Lee","raw_affiliation_strings":["Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, Korea insuklee@yonsei.ac.kr","Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, Korea"],"affiliations":[{"raw_affiliation_string":"Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, Korea insuklee@yonsei.ac.kr","institution_ids":[]},{"raw_affiliation_string":"Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, Korea","institution_ids":["https://openalex.org/I193775966"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":11,"corresponding_author_ids":["https://openalex.org/A5035867403"],"corresponding_institution_ids":["https://openalex.org/I193775966"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":6.2744,"has_fulltext":true,"cited_by_count":169,"citation_normalized_percentile":{"value":0.97367098,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":"43","issue":"D1","first_page":"D996","last_page":"D1002"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11468","display_name":"Genetic Mapping and Diversity in Plants and Animals","score":0.996399998664856,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.994700014591217,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8350698947906494},{"id":"https://openalex.org/keywords/arabidopsis-thaliana","display_name":"Arabidopsis thaliana","score":0.7781309485435486},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5833009481430054},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5574213862419128},{"id":"https://openalex.org/keywords/functional-genomics","display_name":"Functional genomics","score":0.545724093914032},{"id":"https://openalex.org/keywords/gene-regulatory-network","display_name":"Gene regulatory network","score":0.5123497247695923},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.47694531083106995},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.34011310338974},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3284028172492981},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.1489039957523346}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8350698947906494},{"id":"https://openalex.org/C2775988993","wikidata":"https://www.wikidata.org/wiki/Q158695","display_name":"Arabidopsis thaliana","level":4,"score":0.7781309485435486},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5833009481430054},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5574213862419128},{"id":"https://openalex.org/C161078062","wikidata":"https://www.wikidata.org/wiki/Q1068690","display_name":"Functional genomics","level":5,"score":0.545724093914032},{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.5123497247695923},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.47694531083106995},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.34011310338974},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3284028172492981},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.1489039957523346},{"id":"https://openalex.org/C143065580","wikidata":"https://www.wikidata.org/wiki/Q3285695","display_name":"Mutant","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gku1053","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gku1053","pdf_url":"https://academic.oup.com/nar/article-pdf/43/D1/D996/17436102/gku1053.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:25355510","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25355510","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:europepmc.org:3354841","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4383895","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gku1053","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gku1053","pdf_url":"https://academic.oup.com/nar/article-pdf/43/D1/D996/17436102/gku1053.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G6320152228","display_name":null,"funder_award_id":"2010-0017649","funder_id":"https://openalex.org/F4320322120","funder_display_name":"National Research Foundation of Korea"}],"funders":[{"id":"https://openalex.org/F4320320671","display_name":"National Research Foundation","ror":"https://ror.org/05s0g1g46"},{"id":"https://openalex.org/F4320322120","display_name":"National Research Foundation of Korea","ror":"https://ror.org/013aysd81"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2117527407.pdf","grobid_xml":"https://content.openalex.org/works/W2117527407.grobid-xml"},"referenced_works_count":28,"referenced_works":["https://openalex.org/W1566952502","https://openalex.org/W1893617572","https://openalex.org/W2007174731","https://openalex.org/W2041471741","https://openalex.org/W2043377651","https://openalex.org/W2052841916","https://openalex.org/W2059102372","https://openalex.org/W2076469310","https://openalex.org/W2096808786","https://openalex.org/W2106006432","https://openalex.org/W2107249189","https://openalex.org/W2118258530","https://openalex.org/W2126498993","https://openalex.org/W2128601422","https://openalex.org/W2131809153","https://openalex.org/W2133420572","https://openalex.org/W2134092731","https://openalex.org/W2135230723","https://openalex.org/W2139694094","https://openalex.org/W2143691084","https://openalex.org/W2148572458","https://openalex.org/W2150646520","https://openalex.org/W2152379610","https://openalex.org/W2157309281","https://openalex.org/W2163603537","https://openalex.org/W2163800448","https://openalex.org/W4230770774","https://openalex.org/W6675774897"],"related_works":["https://openalex.org/W2360935227","https://openalex.org/W2364993072","https://openalex.org/W2115576822","https://openalex.org/W2356429006","https://openalex.org/W2155595079","https://openalex.org/W2380568150","https://openalex.org/W2385787406","https://openalex.org/W2411510900","https://openalex.org/W2263355832","https://openalex.org/W284518807"],"abstract_inverted_index":{"Arabidopsis":[0],"thaliana":[1,102,177,194],"is":[2],"a":[3,49,52],"reference":[4],"plant":[5,44,181,189],"that":[6,111],"has":[7,34],"been":[8],"studied":[9],"intensively":[10],"for":[11,57,84,100,131,175],"several":[12],"decades.":[13],"Recent":[14],"advances":[15],"in":[16,94,107,151],"high-throughput":[17],"experimental":[18],"technology":[19],"have":[20,90],"enabled":[21],"the":[22,40,78,95,117,144,159,162,192],"generation":[23],"of":[24,28,43,51,81,97,120,143,161,187],"an":[25,126,166,184],"unprecedented":[26],"amount":[27],"data":[29,73,99,108],"from":[30,71],"A.":[31,58,101,132,176,193],"thaliana,":[32,59,133],"which":[33,61,139,171],"facilitated":[35],"data-driven":[36],"approaches":[37],"to":[38],"unravel":[39],"genetic":[41],"organization":[42],"phenotypes.":[45,86],"We":[46,147],"previously":[47],"published":[48],"description":[50],"genome-scale":[53],"functional":[54,173],"gene":[55,68,129,195],"network":[56,83,130],"AraNet,":[60],"was":[62],"constructed":[63],"by":[64],"integrating":[65],"multiple":[66],"co-functional":[67,121,128],"networks":[69],"inferred":[70],"diverse":[72],"types,":[74],"and":[75,155,178],"we":[76,89,112,124,164],"demonstrated":[77],"predictive":[79],"power":[80],"this":[82],"complex":[85],"More":[87],"recently,":[88],"observed":[91],"significant":[92,149],"growth":[93],"availability":[96],"omics":[98],"as":[103,105],"well":[104],"improvements":[106,150],"analysis":[109],"methods":[110],"anticipate":[113],"will":[114],"further":[115],"enhance":[116,158],"integrated":[118],"database":[119],"networks.":[122],"Here,":[123],"present":[125],"updated":[127],"AraNet":[134,167],"v2":[135,168],"(available":[136],"at":[137],"http://www.inetbio.org/aranet),":[138],"covers":[140],"approximately":[141],"84%":[142],"coding":[145],"genome.":[146],"demonstrate":[148],"both":[152],"genome":[153],"coverage":[154],"accuracy.":[156],"To":[157],"usability":[160],"network,":[163],"implemented":[165],"web":[169],"server,":[170],"generates":[172],"predictions":[174],"27":[179],"nonmodel":[180,188],"species":[182],"using":[183],"orthology-based":[185],"projection":[186],"genes":[190],"on":[191],"network.":[196]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":11},{"year":2024,"cited_by_count":15},{"year":2023,"cited_by_count":10},{"year":2022,"cited_by_count":17},{"year":2021,"cited_by_count":22},{"year":2020,"cited_by_count":17},{"year":2019,"cited_by_count":20},{"year":2018,"cited_by_count":12},{"year":2017,"cited_by_count":20},{"year":2016,"cited_by_count":17},{"year":2015,"cited_by_count":7}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
