{"id":"https://openalex.org/W4255594044","doi":"https://doi.org/10.1093/nar/gku1028","title":"A series of PDB-related databanks for everyday needs","display_name":"A series of PDB-related databanks for everyday needs","publication_year":2014,"publication_date":"2014-10-28","ids":{"openalex":"https://openalex.org/W4255594044","doi":"https://doi.org/10.1093/nar/gku1028"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gku1028","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gku1028","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/nar/gku1028","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5018538550","display_name":"Wouter G. Touw","orcid":"https://orcid.org/0000-0002-0407-3923"},"institutions":[{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]},{"id":"https://openalex.org/I2802934949","display_name":"Radboud University Medical Center","ror":"https://ror.org/05wg1m734","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2802934949"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Wouter G. Touw","raw_affiliation_strings":["Centre for Molecular and Biomolecular Informatics, CMBI, Radboud university medical center, Geert Grooteplein Zuid 26-28 6525 GA Nijmegen, The Netherlands","Centre for Molecular and Biomolecular Informatics, CMBI, Radboud university medical center, Geert Grooteplein Zuid 26-28 6525 GA Nijmegen, The Netherlands,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for Molecular and Biomolecular Informatics, CMBI, Radboud university medical center, Geert Grooteplein Zuid 26-28 6525 GA Nijmegen, The Netherlands","institution_ids":[]},{"raw_affiliation_string":"Centre for Molecular and Biomolecular Informatics, CMBI, Radboud university medical center, Geert Grooteplein Zuid 26-28 6525 GA Nijmegen, The Netherlands,","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055976242","display_name":"Coos Baakman","orcid":"https://orcid.org/0000-0003-4317-1566"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Coos Baakman","raw_affiliation_strings":["Centre for Molecular and Biomolecular Informatics, CMBI, Radboud university medical center, Geert Grooteplein Zuid 26-28 6525 GA Nijmegen, The Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for Molecular and Biomolecular Informatics, CMBI, Radboud university medical center, Geert Grooteplein Zuid 26-28 6525 GA Nijmegen, The Netherlands","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060922224","display_name":"Jon E. Black","orcid":null},"institutions":[{"id":"https://openalex.org/I2802934949","display_name":"Radboud University Medical Center","ror":"https://ror.org/05wg1m734","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2802934949"]},{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Jon Black","raw_affiliation_strings":["Centre for Molecular and Biomolecular Informatics, CMBI, Radboud university medical center, Geert Grooteplein Zuid 26-28 6525 GA Nijmegen, The Netherlands","Centre for Molecular and Biomolecular Informatics, CMBI, Radboud university medical center, Geert Grooteplein Zuid 26-28 6525 GA Nijmegen, The Netherlands,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for Molecular and Biomolecular Informatics, CMBI, Radboud university medical center, Geert Grooteplein Zuid 26-28 6525 GA Nijmegen, The Netherlands","institution_ids":[]},{"raw_affiliation_string":"Centre for Molecular and Biomolecular Informatics, CMBI, Radboud university medical center, Geert Grooteplein Zuid 26-28 6525 GA Nijmegen, The Netherlands,","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110225202","display_name":"Tim A. H. te Beek","orcid":null},"institutions":[{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]},{"id":"https://openalex.org/I4210162916","display_name":"Bio-Prodict (Netherlands)","ror":"https://ror.org/05ka98816","country_code":"NL","type":"company","lineage":["https://openalex.org/I4210162916"]},{"id":"https://openalex.org/I2802934949","display_name":"Radboud University Medical Center","ror":"https://ror.org/05wg1m734","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2802934949"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Tim A.\u00a0H. te\u00a0Beek","raw_affiliation_strings":["Bio-Prodict BV, Nieuwe Marktstraat 54E, 6511 AA Nijmegen, The Netherlands","Bio-Prodict BV, Nieuwe Marktstraat 54E, 6511 AA Nijmegen, The Netherlands and","Centre for Molecular and Biomolecular Informatics, CMBI, Radboud university medical center, Geert Grooteplein Zuid 26-28 6525 GA Nijmegen, The Netherlands,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bio-Prodict BV, Nieuwe Marktstraat 54E, 6511 AA Nijmegen, The Netherlands","institution_ids":["https://openalex.org/I4210162916"]},{"raw_affiliation_string":"Bio-Prodict BV, Nieuwe Marktstraat 54E, 6511 AA Nijmegen, The Netherlands and","institution_ids":["https://openalex.org/I4210162916"]},{"raw_affiliation_string":"Centre for Molecular and Biomolecular Informatics, CMBI, Radboud university medical center, Geert Grooteplein Zuid 26-28 6525 GA Nijmegen, The Netherlands,","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027566465","display_name":"Elmar Krieger","orcid":"https://orcid.org/0000-0003-3010-2721"},"institutions":[{"id":"https://openalex.org/I2802934949","display_name":"Radboud University Medical Center","ror":"https://ror.org/05wg1m734","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2802934949"]},{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"E. Krieger","raw_affiliation_strings":["Centre for Molecular and Biomolecular Informatics, CMBI, Radboud university medical center, Geert Grooteplein Zuid 26-28 6525 GA Nijmegen, The Netherlands","Centre for Molecular and Biomolecular Informatics, CMBI, Radboud university medical center, Geert Grooteplein Zuid 26-28 6525 GA Nijmegen, The Netherlands,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for Molecular and Biomolecular Informatics, CMBI, Radboud university medical center, Geert Grooteplein Zuid 26-28 6525 GA Nijmegen, The Netherlands","institution_ids":[]},{"raw_affiliation_string":"Centre for Molecular and Biomolecular Informatics, CMBI, Radboud university medical center, Geert Grooteplein Zuid 26-28 6525 GA Nijmegen, The Netherlands,","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040824480","display_name":"Robbie P. Joosten","orcid":"https://orcid.org/0000-0002-2323-2686"},"institutions":[{"id":"https://openalex.org/I2898336195","display_name":"The Netherlands Cancer Institute","ror":"https://ror.org/03xqtf034","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I2898336195"]},{"id":"https://openalex.org/I2802934949","display_name":"Radboud University Medical Center","ror":"https://ror.org/05wg1m734","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2802934949"]},{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Robbie P. Joosten","raw_affiliation_strings":["Centre for Molecular and Biomolecular Informatics, CMBI, Radboud university medical center, Geert Grooteplein Zuid 26-28 6525 GA Nijmegen, The Netherlands Department of Biochemistry, Netherlands Cancer Institute, Plesmanlaan 121, Amsterdam 1066 CX, The Netherlands","Department of Biochemistry, Netherlands Cancer Institute, Plesmanlaan 121, Amsterdam 1066 CX, The Netherlands","Centre for Molecular and Biomolecular Informatics, CMBI, Radboud university medical center, Geert Grooteplein Zuid 26-28 6525 GA Nijmegen, The Netherlands,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for Molecular and Biomolecular Informatics, CMBI, Radboud university medical center, Geert Grooteplein Zuid 26-28 6525 GA Nijmegen, The Netherlands Department of Biochemistry, Netherlands Cancer Institute, Plesmanlaan 121, Amsterdam 1066 CX, The Netherlands","institution_ids":[]},{"raw_affiliation_string":"Department of Biochemistry, Netherlands Cancer Institute, Plesmanlaan 121, Amsterdam 1066 CX, The Netherlands","institution_ids":["https://openalex.org/I2898336195"]},{"raw_affiliation_string":"Centre for Molecular and Biomolecular Informatics, CMBI, Radboud university medical center, Geert Grooteplein Zuid 26-28 6525 GA Nijmegen, The Netherlands,","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5075419050","display_name":"Gert Vriend","orcid":"https://orcid.org/0000-0002-1067-7053"},"institutions":[{"id":"https://openalex.org/I2802934949","display_name":"Radboud University Medical Center","ror":"https://ror.org/05wg1m734","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2802934949"]},{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]}],"countries":["NL"],"is_corresponding":true,"raw_author_name":"Gert Vriend","raw_affiliation_strings":["Centre for Molecular and Biomolecular Informatics, CMBI, Radboud university medical center, Geert Grooteplein Zuid 26-28 6525 GA Nijmegen, The Netherlands Gerrit.Vriend@radboudumc.nl","Centre for Molecular and Biomolecular Informatics, CMBI, Radboud university medical center, Geert Grooteplein Zuid 26-28 6525 GA Nijmegen, The Netherlands,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for Molecular and Biomolecular Informatics, CMBI, Radboud university medical center, Geert Grooteplein Zuid 26-28 6525 GA Nijmegen, The Netherlands Gerrit.Vriend@radboudumc.nl","institution_ids":[]},{"raw_affiliation_string":"Centre for Molecular and Biomolecular Informatics, CMBI, Radboud university medical center, Geert Grooteplein Zuid 26-28 6525 GA Nijmegen, The Netherlands,","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5075419050"],"corresponding_institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":17.868,"has_fulltext":false,"cited_by_count":1009,"citation_normalized_percentile":{"value":0.99585471,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"43","issue":"D1","first_page":"D364","last_page":"D368"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/protein-data-bank","display_name":"Protein Data Bank (RCSB PDB)","score":0.9693127274513245},{"id":"https://openalex.org/keywords/protein-data-bank","display_name":"Protein Data Bank","score":0.7733560800552368},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5422379374504089},{"id":"https://openalex.org/keywords/series","display_name":"Series (stratigraphy)","score":0.4702666699886322},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.45180925726890564},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.43582531809806824},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.401054710149765},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.37796658277511597},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.32457107305526733},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.21435782313346863},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.08745774626731873}],"concepts":[{"id":"https://openalex.org/C65556437","wikidata":"https://www.wikidata.org/wiki/Q766195","display_name":"Protein Data Bank (RCSB PDB)","level":2,"score":0.9693127274513245},{"id":"https://openalex.org/C119145174","wikidata":"https://www.wikidata.org/wiki/Q7251429","display_name":"Protein Data Bank","level":3,"score":0.7733560800552368},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5422379374504089},{"id":"https://openalex.org/C143724316","wikidata":"https://www.wikidata.org/wiki/Q312468","display_name":"Series (stratigraphy)","level":2,"score":0.4702666699886322},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.45180925726890564},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.43582531809806824},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.401054710149765},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.37796658277511597},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.32457107305526733},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.21435782313346863},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.08745774626731873},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1093/nar/gku1028","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gku1028","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmh:ru:oai:repository.ubn.ru.nl:2066/153067","is_oa":true,"landing_page_url":"http://hdl.handle.net/2066/153067","pdf_url":null,"source":{"id":"https://openalex.org/S4306401843","display_name":"Data Archiving and Networked Services (DANS)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1322597698","host_organization_name":"Royal Netherlands Academy of Arts and Sciences","host_organization_lineage":["https://openalex.org/I1322597698"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Research, 43, D364 - 8","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/nar/gku1028","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gku1028","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4099999964237213,"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure"}],"awards":[{"id":"https://openalex.org/G2195753866","display_name":null,"funder_award_id":"11319","funder_id":"https://openalex.org/F4320321800","funder_display_name":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek"},{"id":"https://openalex.org/G3394992377","display_name":null,"funder_award_id":"KBBE-2011-5","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G6031819734","display_name":"An interactive protein engineering portal with validated software and database facilities","funder_award_id":"289350","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G6804019658","display_name":null,"funder_award_id":"289350","funder_id":"https://openalex.org/F4320338366","funder_display_name":"FP7 Food, Agriculture and Fisheries, Biotechnology"},{"id":"https://openalex.org/G8667726325","display_name":null,"funder_award_id":"722.011.011","funder_id":"https://openalex.org/F4320321800","funder_display_name":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320321800","display_name":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek","ror":"https://ror.org/04jsz6e67"},{"id":"https://openalex.org/F4320336410","display_name":"Center for Molecular Biosciences, University of Innsbruck","ror":null},{"id":"https://openalex.org/F4320338366","display_name":"FP7 Food, Agriculture and Fisheries, Biotechnology","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":61,"referenced_works":["https://openalex.org/W1892158199","https://openalex.org/W1966041739","https://openalex.org/W1974233121","https://openalex.org/W1982583124","https://openalex.org/W1995808589","https://openalex.org/W2007697641","https://openalex.org/W2008708467","https://openalex.org/W2009664421","https://openalex.org/W2013083986","https://openalex.org/W2014776147","https://openalex.org/W2018838993","https://openalex.org/W2030566691","https://openalex.org/W2035503835","https://openalex.org/W2043699100","https://openalex.org/W2050717189","https://openalex.org/W2051545676","https://openalex.org/W2073110681","https://openalex.org/W2083816365","https://openalex.org/W2088933990","https://openalex.org/W2099254366","https://openalex.org/W2105803236","https://openalex.org/W2106657833","https://openalex.org/W2108921801","https://openalex.org/W2110498021","https://openalex.org/W2112200653","https://openalex.org/W2114850508","https://openalex.org/W2120772351","https://openalex.org/W2123687265","https://openalex.org/W2124026197","https://openalex.org/W2124241917","https://openalex.org/W2124707779","https://openalex.org/W2126103104","https://openalex.org/W2126755078","https://openalex.org/W2128893409","https://openalex.org/W2131417105","https://openalex.org/W2132717858","https://openalex.org/W2133978245","https://openalex.org/W2146706051","https://openalex.org/W2147085530","https://openalex.org/W2147526198","https://openalex.org/W2150934173","https://openalex.org/W2151831732","https://openalex.org/W2154792548","https://openalex.org/W2154994578","https://openalex.org/W2156620408","https://openalex.org/W2157040708","https://openalex.org/W2166233246","https://openalex.org/W2166701319","https://openalex.org/W2171681733","https://openalex.org/W2318515902","https://openalex.org/W2401430279","https://openalex.org/W4210309881","https://openalex.org/W4212792307","https://openalex.org/W4234914623","https://openalex.org/W4239198058","https://openalex.org/W4240895940","https://openalex.org/W4249658209","https://openalex.org/W4252672146","https://openalex.org/W6676803473","https://openalex.org/W6678825143","https://openalex.org/W6682895568"],"related_works":["https://openalex.org/W2088162897","https://openalex.org/W2090630809","https://openalex.org/W2106612397","https://openalex.org/W2518314460","https://openalex.org/W2401430279","https://openalex.org/W2325068127","https://openalex.org/W3159719254","https://openalex.org/W2055821700","https://openalex.org/W2152751537","https://openalex.org/W2138568520"],"abstract_inverted_index":{"We":[0,128,159],"present":[1],"a":[2,104,131],"series":[3,105,132],"of":[4,44,79,93,100,106,111,121,133,169],"databanks":[5,29,47,80,134],"(http://swift.cmbi.ru.nl/gv/facilities/)":[6],"that":[7,10,21,61,95,135],"hold":[8,136],"information":[9],"is":[11],"computationally":[12],"derived":[13,28],"from":[14],"Protein":[15],"Data":[16],"Bank":[17],"(PDB)":[18],"entries":[19],"and":[20,52],"might":[22],"augment":[23],"macromolecular":[24],"structure":[25],"studies.":[26,127],"These":[27],"run":[30],"parallel":[31],"to":[32,71,84,142,165],"the":[33,45,63,118,122,167],"PDB,":[34],"i.e.":[35],"they":[36],"have":[37,54,81],"one":[38],"entry":[39],"per":[40],"PDB":[41,114,137,153],"entry.":[42],"Several":[43],"well-established":[46],"such":[48],"as":[49],"HSSP,":[50],"PDBREPORT":[51],"PDB_REDO":[53],"been":[55,69,82],"updated":[56],"and/or":[57],"improved.":[58],"The":[59,148],"software":[60],"creates":[62],"DSSP":[64],"databank,":[65],"for":[66,125],"example,":[67],"has":[68],"rewritten":[70],"better":[72],"cope":[73],"with":[74,155],"pi-helices.":[75],"A":[76],"large":[77],"number":[78],"added":[83,161],"aid":[85,166],"computational":[86],"structural":[87],"biology;":[88],"some":[89],"examples":[90],"are":[91,116],"lists":[92,99,110],"residues":[94,102],"make":[96],"crystal":[97],"contacts,":[98],"contacting":[101],"using":[103],"contact":[107],"definitions":[108],"or":[109,144],"residue":[112],"accessibilities.":[113],"files":[115,138,154],"not":[117],"optimal":[119],"presentation":[120],"underlying":[123],"data":[124],"many":[126],"therefore":[129],"made":[130],"in":[139],"an":[140],"easier":[141],"use":[143],"more":[145],"consistent":[146],"representation.":[147],"BDB":[149],"databank":[150],"holds":[151],"X-ray":[152],"consistently":[156],"represented":[157],"B-factors.":[158],"also":[160],"several":[162],"visualization":[163],"tools":[164],"users":[168],"our":[170],"databanks.":[171]},"counts_by_year":[{"year":2026,"cited_by_count":37},{"year":2025,"cited_by_count":86},{"year":2024,"cited_by_count":121},{"year":2023,"cited_by_count":118},{"year":2022,"cited_by_count":115},{"year":2021,"cited_by_count":118},{"year":2020,"cited_by_count":110},{"year":2019,"cited_by_count":95},{"year":2018,"cited_by_count":78},{"year":2017,"cited_by_count":63},{"year":2016,"cited_by_count":48},{"year":2015,"cited_by_count":17},{"year":2012,"cited_by_count":2}],"updated_date":"2026-07-08T08:33:18.762332","created_date":"2025-10-10T00:00:00"}
