{"id":"https://openalex.org/W2023242798","doi":"https://doi.org/10.1093/nar/gkt398","title":"WebScipio: reconstructing alternative splice variants of eukaryotic proteins","display_name":"WebScipio: reconstructing alternative splice variants of eukaryotic proteins","publication_year":2013,"publication_date":"2013-05-15","ids":{"openalex":"https://openalex.org/W2023242798","doi":"https://doi.org/10.1093/nar/gkt398","mag":"2023242798","pmid":"https://pubmed.ncbi.nlm.nih.gov/23677611"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkt398","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkt398","pdf_url":"https://academic.oup.com/nar/article-pdf/41/W1/W504/16942557/gkt398.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/41/W1/W504/16942557/gkt398.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5062772449","display_name":"Klas Hatje","orcid":"https://orcid.org/0000-0001-5425-8195"},"institutions":[{"id":"https://openalex.org/I4210131661","display_name":"Max Planck Institute for Biophysical Chemistry","ror":"https://ror.org/03e76ya46","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210131661"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Klas Hatje","raw_affiliation_strings":["Group Systems Biology of Motor Proteins, Department of NMR-based Structural Biology, Max-Planck-Institute for Biophysical Chemistry, G\u00f6ttingen 37077, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Group Systems Biology of Motor Proteins, Department of NMR-based Structural Biology, Max-Planck-Institute for Biophysical Chemistry, G\u00f6ttingen 37077, Germany","institution_ids":["https://openalex.org/I4210131661"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073300879","display_name":"Bj\u00f6rn Hammesfahr","orcid":null},"institutions":[{"id":"https://openalex.org/I149899117","display_name":"Max Planck Society","ror":"https://ror.org/01hhn8329","country_code":"DE","type":"nonprofit","lineage":["https://openalex.org/I149899117"]},{"id":"https://openalex.org/I4210131661","display_name":"Max Planck Institute for Biophysical Chemistry","ror":"https://ror.org/03e76ya46","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210131661"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Bj\u00f6rn Hammesfahr","raw_affiliation_strings":["Group Systems Biology of Motor Proteins, Department of NMR-based Structural Biology, Max-Planck-Institute for Biophysical Chemistry, Go ttingen 37077, Germany","Research Group of Systems Biology of Motor Proteins, MPI for Biophysical Chemistry, Max Planck Society"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Group Systems Biology of Motor Proteins, Department of NMR-based Structural Biology, Max-Planck-Institute for Biophysical Chemistry, Go ttingen 37077, Germany","institution_ids":["https://openalex.org/I4210131661"]},{"raw_affiliation_string":"Research Group of Systems Biology of Motor Proteins, MPI for Biophysical Chemistry, Max Planck Society","institution_ids":["https://openalex.org/I149899117"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5057644887","display_name":"Martin Kollmar","orcid":"https://orcid.org/0000-0002-9768-1855"},"institutions":[{"id":"https://openalex.org/I149899117","display_name":"Max Planck Society","ror":"https://ror.org/01hhn8329","country_code":"DE","type":"nonprofit","lineage":["https://openalex.org/I149899117"]},{"id":"https://openalex.org/I4210131661","display_name":"Max Planck Institute for Biophysical Chemistry","ror":"https://ror.org/03e76ya46","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210131661"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Martin Kollmar","raw_affiliation_strings":["Group Systems Biology of Motor Proteins, Department of NMR-based Structural Biology, Max-Planck-Institute for Biophysical Chemistry, Go ttingen 37077, Germany","Research Group of Systems Biology of Motor Proteins, MPI for Biophysical Chemistry, Max Planck Society"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Group Systems Biology of Motor Proteins, Department of NMR-based Structural Biology, Max-Planck-Institute for Biophysical Chemistry, Go ttingen 37077, Germany","institution_ids":["https://openalex.org/I4210131661"]},{"raw_affiliation_string":"Research Group of Systems Biology of Motor Proteins, MPI for Biophysical Chemistry, Max Planck Society","institution_ids":["https://openalex.org/I149899117"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":1.0473,"has_fulltext":true,"cited_by_count":17,"citation_normalized_percentile":{"value":0.76028006,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"41","issue":"W1","first_page":"W504","last_page":"W509"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7898440957069397},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.591930091381073},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5866065621376038},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5732561945915222},{"id":"https://openalex.org/keywords/alternative-splicing","display_name":"Alternative splicing","score":0.5568851232528687},{"id":"https://openalex.org/keywords/exon","display_name":"Exon","score":0.5361153483390808},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.49686411023139954},{"id":"https://openalex.org/keywords/intron","display_name":"Intron","score":0.48606255650520325},{"id":"https://openalex.org/keywords/splice","display_name":"splice","score":0.48094838857650757},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.4681105315685272},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.46281325817108154},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.1857319176197052},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.17699533700942993},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.11234891414642334}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7898440957069397},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.591930091381073},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5866065621376038},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5732561945915222},{"id":"https://openalex.org/C194583182","wikidata":"https://www.wikidata.org/wiki/Q21114084","display_name":"Alternative splicing","level":4,"score":0.5568851232528687},{"id":"https://openalex.org/C36823959","wikidata":"https://www.wikidata.org/wiki/Q373027","display_name":"Exon","level":3,"score":0.5361153483390808},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.49686411023139954},{"id":"https://openalex.org/C94671646","wikidata":"https://www.wikidata.org/wiki/Q207551","display_name":"Intron","level":3,"score":0.48606255650520325},{"id":"https://openalex.org/C2780989783","wikidata":"https://www.wikidata.org/wiki/Q7578557","display_name":"splice","level":3,"score":0.48094838857650757},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.4681105315685272},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.46281325817108154},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.1857319176197052},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.17699533700942993},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.11234891414642334}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005091","descriptor_name":"Exons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005091","descriptor_name":"Exons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005091","descriptor_name":"Exons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007438","descriptor_name":"Introns","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007438","descriptor_name":"Introns","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007438","descriptor_name":"Introns","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017398","descriptor_name":"Alternative Splicing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017398","descriptor_name":"Alternative Splicing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017398","descriptor_name":"Alternative Splicing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018076","descriptor_name":"DNA, Complementary","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D018076","descriptor_name":"DNA, Complementary","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D018076","descriptor_name":"DNA, Complementary","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D020224","descriptor_name":"Expressed Sequence Tags","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020224","descriptor_name":"Expressed Sequence Tags","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020224","descriptor_name":"Expressed Sequence Tags","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056890","descriptor_name":"Eukaryota","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D056890","descriptor_name":"Eukaryota","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D056890","descriptor_name":"Eukaryota","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/nar/gkt398","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkt398","pdf_url":"https://academic.oup.com/nar/article-pdf/41/W1/W504/16942557/gkt398.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:23677611","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23677611","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:europepmc.org:2686071","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3692071","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.788.7534","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.788.7534","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/63/9e/gkt398.PMC3692071.pdf","raw_type":"text"},{"id":"pmh:oai:pure.mpg.de:item_1824886","is_oa":true,"landing_page_url":"http://hdl.handle.net/11858/00-001M-0000-0014-1B16-2","pdf_url":null,"source":{"id":"https://openalex.org/S4306400654","display_name":"MPG.PuRe (Max Planck Society)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I149899117","host_organization_name":"Max Planck Society","host_organization_lineage":["https://openalex.org/I149899117"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Research","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/nar/gkt398","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkt398","pdf_url":"https://academic.oup.com/nar/article-pdf/41/W1/W504/16942557/gkt398.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2023242798.pdf","grobid_xml":"https://content.openalex.org/works/W2023242798.grobid-xml"},"referenced_works_count":27,"referenced_works":["https://openalex.org/W1504726546","https://openalex.org/W1522333620","https://openalex.org/W1767772592","https://openalex.org/W1984829321","https://openalex.org/W1985471440","https://openalex.org/W2011584439","https://openalex.org/W2030153716","https://openalex.org/W2037687988","https://openalex.org/W2074238193","https://openalex.org/W2089543102","https://openalex.org/W2096525273","https://openalex.org/W2104139298","https://openalex.org/W2108787198","https://openalex.org/W2117179531","https://openalex.org/W2122141178","https://openalex.org/W2134580251","https://openalex.org/W2136145671","https://openalex.org/W2136826997","https://openalex.org/W2141572089","https://openalex.org/W2141847640","https://openalex.org/W2152118986","https://openalex.org/W2166187656","https://openalex.org/W2402793346","https://openalex.org/W2916083703","https://openalex.org/W4242729757","https://openalex.org/W4244606935","https://openalex.org/W6680103060"],"related_works":["https://openalex.org/W2018387988","https://openalex.org/W2039352533","https://openalex.org/W4283117924","https://openalex.org/W2157125050","https://openalex.org/W2062868756","https://openalex.org/W4242521457","https://openalex.org/W2092554027","https://openalex.org/W2227731780","https://openalex.org/W2158241396","https://openalex.org/W1977599835"],"abstract_inverted_index":{"Accurate":[0],"exon-intron":[1],"structures":[2,33,58],"are":[3,59],"essential":[4],"prerequisites":[5],"in":[6,61,167],"genomics,":[7],"proteomics":[8],"and":[9,14,22,38,50,64,125,152,184],"for":[10,28,136],"many":[11],"protein":[12,36,174],"family":[13],"single":[15],"gene":[16,32,53,57,134,169,186],"studies.":[17],"We":[18],"originally":[19],"developed":[20],"Scipio":[21],"the":[23,29,70,80,93,113,132,137,156,168],"corresponding":[24,171],"web":[25,94,150,158],"service":[26,163],"WebScipio":[27,42,81,146,188],"reconstruction":[30],"of":[31,75,92,103,139,142,175,180],"based":[34],"on":[35,85],"sequences":[37],"available":[39,78,191],"genome":[40,100],"assemblies.":[41],"also":[43,111],"allows":[44],"predicting":[45],"mutually":[46],"exclusive":[47],"spliced":[48],"exons":[49],"tandemly":[51],"arrayed":[52],"duplicates.":[54,187],"The":[55,73,89],"obtained":[56],"illustrated":[60],"graphical":[62],"schemes":[63],"can":[65,128],"be":[66,129],"analysed":[67],"down":[68],"to":[69,98,131,164,172],"nucleotide":[71],"level.":[72],"set":[74],"eukaryotic":[76,106],"genomes":[77],"at":[79,192],"server":[82,95,159],"is":[83,189],"updated":[84],"a":[86,117,148],"daily":[87],"basis.":[88],"current":[90],"version":[91],"provides":[96],"access":[97],"\u223c3400":[99],"assembly":[101],"files":[102],">1100":[104],"sequenced":[105],"species.":[107],"Here,":[108],"we":[109,153],"have":[110],"extended":[112],"functionality":[114],"by":[115],"adding":[116],"module":[118],"with":[119],"which":[120],"expressed":[121],"sequence":[122],"tag":[123],"(EST)":[124],"cDNA":[126],"data":[127],"mapped":[130],"reconstructed":[133],"structure":[135,170],"identification":[138],"all":[140,178],"types":[141,179],"alternative":[143,181],"splice":[144,182],"variants.":[145],"has":[147],"user-friendly":[149],"interface,":[151],"believe":[154],"that":[155],"improved":[157],"will":[160],"provide":[161],"better":[162],"biologists":[165],"interested":[166],"their":[173],"interest,":[176],"including":[177],"forms":[183],"tandem":[185],"freely":[190],"http://www.webscipio.org.":[193]},"counts_by_year":[{"year":2022,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":3}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}