{"id":"https://openalex.org/W2103296919","doi":"https://doi.org/10.1093/nar/gkt1209","title":"The SILVA and \u201cAll-species Living Tree Project (LTP)\u201d taxonomic frameworks","display_name":"The SILVA and \u201cAll-species Living Tree Project (LTP)\u201d taxonomic frameworks","publication_year":2013,"publication_date":"2013-11-28","ids":{"openalex":"https://openalex.org/W2103296919","doi":"https://doi.org/10.1093/nar/gkt1209","mag":"2103296919","pmid":"https://pubmed.ncbi.nlm.nih.gov/24293649"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkt1209","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkt1209","pdf_url":"https://academic.oup.com/nar/article-pdf/42/D1/D643/16802423/gkt1209.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/42/D1/D643/16802423/gkt1209.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5091885910","display_name":"Pelin Yilmaz","orcid":"https://orcid.org/0000-0003-4724-323X"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]},{"id":"https://openalex.org/I180437899","display_name":"University of Bremen","ror":"https://ror.org/04ers2y35","country_code":"DE","type":"education","lineage":["https://openalex.org/I180437899"]}],"countries":["CA","DE"],"is_corresponding":false,"raw_author_name":"Pelin Yilmaz","raw_affiliation_strings":["Microbial Genomics and Bioinformatics Research Group, Max Planck Institute for Marine Microbiology, D-28359 Bremen, Germany, Department of Botany, University of British Columbia, Vancouver V6T 1Z4, Canada, Department of Zoology, University of British Columbia, Vancouver V6T 1Z4, Canada, Ribocon GmbH, D-28359 Bremen, Germany, School of Engineering and Science, Jacobs University Bremen gGmbH, D-28759 Bremen, Germany and Lehrstuhl f\u00fcr Mikrobiologie, Technische Universit\u00e4t M\u00fcnchen, D-853530 Freising, Germany","University of British Columbia, Vancouver, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Microbial Genomics and Bioinformatics Research Group, Max Planck Institute for Marine Microbiology, D-28359 Bremen, Germany, Department of Botany, University of British Columbia, Vancouver V6T 1Z4, Canada, Department of Zoology, University of British Columbia, Vancouver V6T 1Z4, Canada, Ribocon GmbH, D-28359 Bremen, Germany, School of Engineering and Science, Jacobs University Bremen gGmbH, D-28759 Bremen, Germany and Lehrstuhl f\u00fcr Mikrobiologie, Technische Universit\u00e4t M\u00fcnchen, D-853530 Freising, Germany","institution_ids":["https://openalex.org/I180437899"]},{"raw_affiliation_string":"University of British Columbia, Vancouver, Canada","institution_ids":["https://openalex.org/I141945490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007811014","display_name":"Laura Wegener Parfrey","orcid":"https://orcid.org/0000-0001-6959-7616"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]},{"id":"https://openalex.org/I193619901","display_name":"Constructor University","ror":"https://ror.org/02yrs2n53","country_code":"DE","type":"education","lineage":["https://openalex.org/I193619901"]},{"id":"https://openalex.org/I4210103014","display_name":"Max Planck Institute for Marine Microbiology","ror":"https://ror.org/02385fa51","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210103014"]}],"countries":["CA","DE"],"is_corresponding":false,"raw_author_name":"Laura Wegener Parfrey","raw_affiliation_strings":["Microbial Genomics and Bioinformatics Research Group, Max Planck Institute for Marine Microbiology, D-28359 Bremen, Germany, 2Department of Botany, University of British Columbia, Vancouver V6T 1Z4, Canada, 3Department of Zoology, University of British Columbia, Vancouver V6T 1Z4, Canada, 4Ribocon GmbH, D-28359 Bremen, Germany, 5School of Engineering and Science, Jacobs University Bremen gGmbH, D-28759 Bremen, Germany and 6Lehrstuhl f\u00fcr Mikrobiologie, Technische Universit\u00e4t M\u00fcnchen, D-853530 Freising, Germany","University of British Columbia, Vancouver, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Microbial Genomics and Bioinformatics Research Group, Max Planck Institute for Marine Microbiology, D-28359 Bremen, Germany, 2Department of Botany, University of British Columbia, Vancouver V6T 1Z4, Canada, 3Department of Zoology, University of British Columbia, Vancouver V6T 1Z4, Canada, 4Ribocon GmbH, D-28359 Bremen, Germany, 5School of Engineering and Science, Jacobs University Bremen gGmbH, D-28759 Bremen, Germany and 6Lehrstuhl f\u00fcr Mikrobiologie, Technische Universit\u00e4t M\u00fcnchen, D-853530 Freising, Germany","institution_ids":["https://openalex.org/I4210103014","https://openalex.org/I141945490","https://openalex.org/I193619901"]},{"raw_affiliation_string":"University of British Columbia, Vancouver, Canada","institution_ids":["https://openalex.org/I141945490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073935114","display_name":"Pablo Yarza","orcid":"https://orcid.org/0000-0001-5716-9403"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]},{"id":"https://openalex.org/I149899117","display_name":"Max Planck Society","ror":"https://ror.org/01hhn8329","country_code":"DE","type":"nonprofit","lineage":["https://openalex.org/I149899117"]},{"id":"https://openalex.org/I193619901","display_name":"Constructor University","ror":"https://ror.org/02yrs2n53","country_code":"DE","type":"education","lineage":["https://openalex.org/I193619901"]},{"id":"https://openalex.org/I4210103014","display_name":"Max Planck Institute for Marine Microbiology","ror":"https://ror.org/02385fa51","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210103014"]}],"countries":["CA","DE"],"is_corresponding":false,"raw_author_name":"Pablo Yarza","raw_affiliation_strings":["Microbial Genomics and Bioinformatics Research Group, Max Planck Institute for Marine Microbiology, D-28359 Bremen, Germany, 2Department of Botany, University of British Columbia, Vancouver V6T 1Z4, Canada, 3Department of Zoology, University of British Columbia, Vancouver V6T 1Z4, Canada, 4Ribocon GmbH, D-28359 Bremen, Germany, 5School of Engineering and Science, Jacobs University Bremen gGmbH, D-28759 Bremen, Germany and 6Lehrstuhl f\u00fcr Mikrobiologie, Technische Universit\u00e4t M\u00fcnchen, D-853530 Freising, Germany","Microbial Genomics Group, Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Max Planck Society"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Microbial Genomics and Bioinformatics Research Group, Max Planck Institute for Marine Microbiology, D-28359 Bremen, Germany, 2Department of Botany, University of British Columbia, Vancouver V6T 1Z4, Canada, 3Department of Zoology, University of British Columbia, Vancouver V6T 1Z4, Canada, 4Ribocon GmbH, D-28359 Bremen, Germany, 5School of Engineering and Science, Jacobs University Bremen gGmbH, D-28759 Bremen, Germany and 6Lehrstuhl f\u00fcr Mikrobiologie, Technische Universit\u00e4t M\u00fcnchen, D-853530 Freising, Germany","institution_ids":["https://openalex.org/I4210103014","https://openalex.org/I141945490","https://openalex.org/I193619901"]},{"raw_affiliation_string":"Microbial Genomics Group, Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Max Planck Society","institution_ids":["https://openalex.org/I4210103014","https://openalex.org/I149899117"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040236033","display_name":"Jan Gerken","orcid":"https://orcid.org/0000-0002-3005-7185"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]},{"id":"https://openalex.org/I149899117","display_name":"Max Planck Society","ror":"https://ror.org/01hhn8329","country_code":"DE","type":"nonprofit","lineage":["https://openalex.org/I149899117"]},{"id":"https://openalex.org/I193619901","display_name":"Constructor University","ror":"https://ror.org/02yrs2n53","country_code":"DE","type":"education","lineage":["https://openalex.org/I193619901"]},{"id":"https://openalex.org/I4210103014","display_name":"Max Planck Institute for Marine Microbiology","ror":"https://ror.org/02385fa51","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210103014"]}],"countries":["CA","DE"],"is_corresponding":false,"raw_author_name":"Jan Gerken","raw_affiliation_strings":["Microbial Genomics and Bioinformatics Research Group, Max Planck Institute for Marine Microbiology, D-28359 Bremen, Germany, 2Department of Botany, University of British Columbia, Vancouver V6T 1Z4, Canada, 3Department of Zoology, University of British Columbia, Vancouver V6T 1Z4, Canada, 4Ribocon GmbH, D-28359 Bremen, Germany, 5School of Engineering and Science, Jacobs University Bremen gGmbH, D-28759 Bremen, Germany and 6Lehrstuhl f\u00fcr Mikrobiologie, Technische Universit\u00e4t M\u00fcnchen, D-853530 Freising, Germany","Microbial Genomics Group, Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Max Planck Society"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Microbial Genomics and Bioinformatics Research Group, Max Planck Institute for Marine Microbiology, D-28359 Bremen, Germany, 2Department of Botany, University of British Columbia, Vancouver V6T 1Z4, Canada, 3Department of Zoology, University of British Columbia, Vancouver V6T 1Z4, Canada, 4Ribocon GmbH, D-28359 Bremen, Germany, 5School of Engineering and Science, Jacobs University Bremen gGmbH, D-28759 Bremen, Germany and 6Lehrstuhl f\u00fcr Mikrobiologie, Technische Universit\u00e4t M\u00fcnchen, D-853530 Freising, Germany","institution_ids":["https://openalex.org/I4210103014","https://openalex.org/I141945490","https://openalex.org/I193619901"]},{"raw_affiliation_string":"Microbial Genomics Group, Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Max Planck Society","institution_ids":["https://openalex.org/I4210103014","https://openalex.org/I149899117"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003436229","display_name":"Elmar Pruesse","orcid":"https://orcid.org/0000-0002-1656-6020"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]},{"id":"https://openalex.org/I149899117","display_name":"Max Planck Society","ror":"https://ror.org/01hhn8329","country_code":"DE","type":"nonprofit","lineage":["https://openalex.org/I149899117"]},{"id":"https://openalex.org/I193619901","display_name":"Constructor University","ror":"https://ror.org/02yrs2n53","country_code":"DE","type":"education","lineage":["https://openalex.org/I193619901"]},{"id":"https://openalex.org/I4210103014","display_name":"Max Planck Institute for Marine Microbiology","ror":"https://ror.org/02385fa51","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210103014"]}],"countries":["CA","DE"],"is_corresponding":false,"raw_author_name":"Elmar Pruesse","raw_affiliation_strings":["Microbial Genomics and Bioinformatics Research Group, Max Planck Institute for Marine Microbiology, D-28359 Bremen, Germany, 2Department of Botany, University of British Columbia, Vancouver V6T 1Z4, Canada, 3Department of Zoology, University of British Columbia, Vancouver V6T 1Z4, Canada, 4Ribocon GmbH, D-28359 Bremen, Germany, 5School of Engineering and Science, Jacobs University Bremen gGmbH, D-28759 Bremen, Germany and 6Lehrstuhl f\u00fcr Mikrobiologie, Technische Universit\u00e4t M\u00fcnchen, D-853530 Freising, Germany","Microbial Genomics Group, Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Max Planck Society"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Microbial Genomics and Bioinformatics Research Group, Max Planck Institute for Marine Microbiology, D-28359 Bremen, Germany, 2Department of Botany, University of British Columbia, Vancouver V6T 1Z4, Canada, 3Department of Zoology, University of British Columbia, Vancouver V6T 1Z4, Canada, 4Ribocon GmbH, D-28359 Bremen, Germany, 5School of Engineering and Science, Jacobs University Bremen gGmbH, D-28759 Bremen, Germany and 6Lehrstuhl f\u00fcr Mikrobiologie, Technische Universit\u00e4t M\u00fcnchen, D-853530 Freising, Germany","institution_ids":["https://openalex.org/I4210103014","https://openalex.org/I141945490","https://openalex.org/I193619901"]},{"raw_affiliation_string":"Microbial Genomics Group, Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Max Planck Society","institution_ids":["https://openalex.org/I4210103014","https://openalex.org/I149899117"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079683358","display_name":"Christian Quast","orcid":"https://orcid.org/0000-0001-6409-2352"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]},{"id":"https://openalex.org/I149899117","display_name":"Max Planck Society","ror":"https://ror.org/01hhn8329","country_code":"DE","type":"nonprofit","lineage":["https://openalex.org/I149899117"]},{"id":"https://openalex.org/I193619901","display_name":"Constructor University","ror":"https://ror.org/02yrs2n53","country_code":"DE","type":"education","lineage":["https://openalex.org/I193619901"]},{"id":"https://openalex.org/I4210103014","display_name":"Max Planck Institute for Marine Microbiology","ror":"https://ror.org/02385fa51","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210103014"]}],"countries":["CA","DE"],"is_corresponding":false,"raw_author_name":"Christian Quast","raw_affiliation_strings":["Microbial Genomics and Bioinformatics Research Group, Max Planck Institute for Marine Microbiology, D-28359 Bremen, Germany, 2Department of Botany, University of British Columbia, Vancouver V6T 1Z4, Canada, 3Department of Zoology, University of British Columbia, Vancouver V6T 1Z4, Canada, 4Ribocon GmbH, D-28359 Bremen, Germany, 5School of Engineering and Science, Jacobs University Bremen gGmbH, D-28759 Bremen, Germany and 6Lehrstuhl f\u00fcr Mikrobiologie, Technische Universit\u00e4t M\u00fcnchen, D-853530 Freising, Germany","Microbial Genomics Group, Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Max Planck Society"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Microbial Genomics and Bioinformatics Research Group, Max Planck Institute for Marine Microbiology, D-28359 Bremen, Germany, 2Department of Botany, University of British Columbia, Vancouver V6T 1Z4, Canada, 3Department of Zoology, University of British Columbia, Vancouver V6T 1Z4, Canada, 4Ribocon GmbH, D-28359 Bremen, Germany, 5School of Engineering and Science, Jacobs University Bremen gGmbH, D-28759 Bremen, Germany and 6Lehrstuhl f\u00fcr Mikrobiologie, Technische Universit\u00e4t M\u00fcnchen, D-853530 Freising, Germany","institution_ids":["https://openalex.org/I4210103014","https://openalex.org/I141945490","https://openalex.org/I193619901"]},{"raw_affiliation_string":"Microbial Genomics Group, Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Max Planck Society","institution_ids":["https://openalex.org/I4210103014","https://openalex.org/I149899117"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056910945","display_name":"Timmy Schweer","orcid":null},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]},{"id":"https://openalex.org/I149899117","display_name":"Max Planck Society","ror":"https://ror.org/01hhn8329","country_code":"DE","type":"nonprofit","lineage":["https://openalex.org/I149899117"]},{"id":"https://openalex.org/I193619901","display_name":"Constructor University","ror":"https://ror.org/02yrs2n53","country_code":"DE","type":"education","lineage":["https://openalex.org/I193619901"]},{"id":"https://openalex.org/I4210103014","display_name":"Max Planck Institute for Marine Microbiology","ror":"https://ror.org/02385fa51","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210103014"]}],"countries":["CA","DE"],"is_corresponding":false,"raw_author_name":"Timmy Schweer","raw_affiliation_strings":["Microbial Genomics and Bioinformatics Research Group, Max Planck Institute for Marine Microbiology, D-28359 Bremen, Germany, 2Department of Botany, University of British Columbia, Vancouver V6T 1Z4, Canada, 3Department of Zoology, University of British Columbia, Vancouver V6T 1Z4, Canada, 4Ribocon GmbH, D-28359 Bremen, Germany, 5School of Engineering and Science, Jacobs University Bremen gGmbH, D-28759 Bremen, Germany and 6Lehrstuhl f\u00fcr Mikrobiologie, Technische Universit\u00e4t M\u00fcnchen, D-853530 Freising, Germany","Microbial Genomics Group, Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Max Planck Society"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Microbial Genomics and Bioinformatics Research Group, Max Planck Institute for Marine Microbiology, D-28359 Bremen, Germany, 2Department of Botany, University of British Columbia, Vancouver V6T 1Z4, Canada, 3Department of Zoology, University of British Columbia, Vancouver V6T 1Z4, Canada, 4Ribocon GmbH, D-28359 Bremen, Germany, 5School of Engineering and Science, Jacobs University Bremen gGmbH, D-28759 Bremen, Germany and 6Lehrstuhl f\u00fcr Mikrobiologie, Technische Universit\u00e4t M\u00fcnchen, D-853530 Freising, Germany","institution_ids":["https://openalex.org/I4210103014","https://openalex.org/I141945490","https://openalex.org/I193619901"]},{"raw_affiliation_string":"Microbial Genomics Group, Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Max Planck Society","institution_ids":["https://openalex.org/I4210103014","https://openalex.org/I149899117"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040031141","display_name":"J\u00f6rg Peplies","orcid":"https://orcid.org/0000-0001-6154-4886"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]},{"id":"https://openalex.org/I149899117","display_name":"Max Planck Society","ror":"https://ror.org/01hhn8329","country_code":"DE","type":"nonprofit","lineage":["https://openalex.org/I149899117"]},{"id":"https://openalex.org/I193619901","display_name":"Constructor University","ror":"https://ror.org/02yrs2n53","country_code":"DE","type":"education","lineage":["https://openalex.org/I193619901"]},{"id":"https://openalex.org/I4210103014","display_name":"Max Planck Institute for Marine Microbiology","ror":"https://ror.org/02385fa51","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210103014"]}],"countries":["CA","DE"],"is_corresponding":false,"raw_author_name":"J\u00f6rg Peplies","raw_affiliation_strings":["Microbial Genomics and Bioinformatics Research Group, Max Planck Institute for Marine Microbiology, D-28359 Bremen, Germany, 2Department of Botany, University of British Columbia, Vancouver V6T 1Z4, Canada, 3Department of Zoology, University of British Columbia, Vancouver V6T 1Z4, Canada, 4Ribocon GmbH, D-28359 Bremen, Germany, 5School of Engineering and Science, Jacobs University Bremen gGmbH, D-28759 Bremen, Germany and 6Lehrstuhl f\u00fcr Mikrobiologie, Technische Universit\u00e4t M\u00fcnchen, D-853530 Freising, Germany","Microbial Genomics Group, Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Max Planck Society"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Microbial Genomics and Bioinformatics Research Group, Max Planck Institute for Marine Microbiology, D-28359 Bremen, Germany, 2Department of Botany, University of British Columbia, Vancouver V6T 1Z4, Canada, 3Department of Zoology, University of British Columbia, Vancouver V6T 1Z4, Canada, 4Ribocon GmbH, D-28359 Bremen, Germany, 5School of Engineering and Science, Jacobs University Bremen gGmbH, D-28759 Bremen, Germany and 6Lehrstuhl f\u00fcr Mikrobiologie, Technische Universit\u00e4t M\u00fcnchen, D-853530 Freising, Germany","institution_ids":["https://openalex.org/I4210103014","https://openalex.org/I141945490","https://openalex.org/I193619901"]},{"raw_affiliation_string":"Microbial Genomics Group, Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Max Planck Society","institution_ids":["https://openalex.org/I4210103014","https://openalex.org/I149899117"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027803715","display_name":"Wolfgang Ludwig","orcid":"https://orcid.org/0000-0002-3154-9114"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]},{"id":"https://openalex.org/I193619901","display_name":"Constructor University","ror":"https://ror.org/02yrs2n53","country_code":"DE","type":"education","lineage":["https://openalex.org/I193619901"]},{"id":"https://openalex.org/I4210103014","display_name":"Max Planck Institute for Marine Microbiology","ror":"https://ror.org/02385fa51","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210103014"]}],"countries":["CA","DE"],"is_corresponding":false,"raw_author_name":"Wolfgang Ludwig","raw_affiliation_strings":["Microbial Genomics and Bioinformatics Research Group, Max Planck Institute for Marine Microbiology, D-28359 Bremen, Germany, 2Department of Botany, University of British Columbia, Vancouver V6T 1Z4, Canada, 3Department of Zoology, University of British Columbia, Vancouver V6T 1Z4, Canada, 4Ribocon GmbH, D-28359 Bremen, Germany, 5School of Engineering and Science, Jacobs University Bremen gGmbH, D-28759 Bremen, Germany and 6Lehrstuhl f\u00fcr Mikrobiologie, Technische Universit\u00e4t M\u00fcnchen, D-853530 Freising, Germany","University of British Columbia, Vancouver, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Microbial Genomics and Bioinformatics Research Group, Max Planck Institute for Marine Microbiology, D-28359 Bremen, Germany, 2Department of Botany, University of British Columbia, Vancouver V6T 1Z4, Canada, 3Department of Zoology, University of British Columbia, Vancouver V6T 1Z4, Canada, 4Ribocon GmbH, D-28359 Bremen, Germany, 5School of Engineering and Science, Jacobs University Bremen gGmbH, D-28759 Bremen, Germany and 6Lehrstuhl f\u00fcr Mikrobiologie, Technische Universit\u00e4t M\u00fcnchen, D-853530 Freising, Germany","institution_ids":["https://openalex.org/I4210103014","https://openalex.org/I141945490","https://openalex.org/I193619901"]},{"raw_affiliation_string":"University of British Columbia, Vancouver, Canada","institution_ids":["https://openalex.org/I141945490"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5091470163","display_name":"Frank Oliver Gl\u00f6ckner","orcid":"https://orcid.org/0000-0001-8528-9023"},"institutions":[{"id":"https://openalex.org/I149899117","display_name":"Max Planck Society","ror":"https://ror.org/01hhn8329","country_code":"DE","type":"nonprofit","lineage":["https://openalex.org/I149899117"]},{"id":"https://openalex.org/I4210103014","display_name":"Max Planck Institute for Marine Microbiology","ror":"https://ror.org/02385fa51","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210103014"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Frank Oliver Gl\u00f6ckner","raw_affiliation_strings":["Microbial Genomics Group, Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Max Planck Society"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Microbial Genomics Group, Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Max Planck Society","institution_ids":["https://openalex.org/I4210103014","https://openalex.org/I149899117"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":10,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":19.0013,"has_fulltext":true,"cited_by_count":4140,"citation_normalized_percentile":{"value":0.99609706,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"42","issue":"D1","first_page":"D643","last_page":"D648"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12640","display_name":"Environmental DNA in Biodiversity Studies","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8992266654968262},{"id":"https://openalex.org/keywords/taxonomy","display_name":"Taxonomy (biology)","score":0.7896387577056885},{"id":"https://openalex.org/keywords/taxon","display_name":"Taxon","score":0.6955870389938354},{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.6610319018363953},{"id":"https://openalex.org/keywords/ribosomal-rna","display_name":"Ribosomal RNA","score":0.592244029045105},{"id":"https://openalex.org/keywords/three-domain-system","display_name":"Three-domain system","score":0.4784110486507416},{"id":"https://openalex.org/keywords/phylogenetics","display_name":"Phylogenetics","score":0.47101032733917236},{"id":"https://openalex.org/keywords/evolutionary-biology","display_name":"Evolutionary biology","score":0.44024598598480225},{"id":"https://openalex.org/keywords/archaea","display_name":"Archaea","score":0.34786587953567505},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.34297415614128113},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.30654793977737427},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.19762179255485535}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8992266654968262},{"id":"https://openalex.org/C58642233","wikidata":"https://www.wikidata.org/wiki/Q8269924","display_name":"Taxonomy (biology)","level":2,"score":0.7896387577056885},{"id":"https://openalex.org/C71640776","wikidata":"https://www.wikidata.org/wiki/Q16521","display_name":"Taxon","level":2,"score":0.6955870389938354},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.6610319018363953},{"id":"https://openalex.org/C67905577","wikidata":"https://www.wikidata.org/wiki/Q215980","display_name":"Ribosomal RNA","level":3,"score":0.592244029045105},{"id":"https://openalex.org/C188880781","wikidata":"https://www.wikidata.org/wiki/Q2430501","display_name":"Three-domain system","level":4,"score":0.4784110486507416},{"id":"https://openalex.org/C90132467","wikidata":"https://www.wikidata.org/wiki/Q171184","display_name":"Phylogenetics","level":3,"score":0.47101032733917236},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.44024598598480225},{"id":"https://openalex.org/C550995028","wikidata":"https://www.wikidata.org/wiki/Q10872","display_name":"Archaea","level":3,"score":0.34786587953567505},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.34297415614128113},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.30654793977737427},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.19762179255485535}],"mesh":[{"descriptor_ui":"D001105","descriptor_name":"Archaea","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D001105","descriptor_name":"Archaea","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D001105","descriptor_name":"Archaea","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D005798","descriptor_name":"Genes, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005798","descriptor_name":"Genes, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005798","descriptor_name":"Genes, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012336","descriptor_name":"RNA, Ribosomal, 16S","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012336","descriptor_name":"RNA, Ribosomal, 16S","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012336","descriptor_name":"RNA, Ribosomal, 16S","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012338","descriptor_name":"RNA, Ribosomal, 23S","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012338","descriptor_name":"RNA, Ribosomal, 23S","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012338","descriptor_name":"RNA, Ribosomal, 23S","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019766","descriptor_name":"Genes, Archaeal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019766","descriptor_name":"Genes, Archaeal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019766","descriptor_name":"Genes, Archaeal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020459","descriptor_name":"Genes, rRNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020459","descriptor_name":"Genes, rRNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020459","descriptor_name":"Genes, rRNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056890","descriptor_name":"Eukaryota","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D056890","descriptor_name":"Eukaryota","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D056890","descriptor_name":"Eukaryota","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D056890","descriptor_name":"Eukaryota","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D056890","descriptor_name":"Eukaryota","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D056890","descriptor_name":"Eukaryota","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":9,"locations":[{"id":"doi:10.1093/nar/gkt1209","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkt1209","pdf_url":"https://academic.oup.com/nar/article-pdf/42/D1/D643/16802423/gkt1209.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:24293649","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24293649","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.1008.111","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.1008.111","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/early/2013/11/28/nar.gkt1209.full.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.1012.8337","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.1012.8337","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/early/2013/11/28/nar.gkt1209.full-text-lowres.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.1016.43","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.1016.43","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/42/D1/D643.full-text-lowres.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.1029.7827","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.1029.7827","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/42/D1/D643.full.pdf","raw_type":"text"},{"id":"pmh:oai:escidoc.org:escidoc:2484404","is_oa":false,"landing_page_url":"http://hdl.handle.net/21.11116/0000-0001-C600-F","pdf_url":null,"source":{"id":"https://openalex.org/S7407052962","display_name":"Max Planck Digital Library","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:europepmc.org:2943248","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3965112","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pure.mpg.de:item_2484404","is_oa":true,"landing_page_url":"https://hdl.handle.net/21.11116/0000-0001-C600-F","pdf_url":null,"source":{"id":"https://openalex.org/S4306400654","display_name":"MPG.PuRe (Max Planck Society)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I149899117","host_organization_name":"Max Planck Society","host_organization_lineage":["https://openalex.org/I149899117"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Research (London)","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/nar/gkt1209","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkt1209","pdf_url":"https://academic.oup.com/nar/article-pdf/42/D1/D643/16802423/gkt1209.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/15","score":0.7200000286102295,"display_name":"Life in Land"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"},{"id":"https://openalex.org/F4320324683","display_name":"Max-Planck-Institut f\u00fcr Terrestrische Mikrobiologie","ror":"https://ror.org/05r7n9c40"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2103296919.pdf","grobid_xml":"https://content.openalex.org/works/W2103296919.grobid-xml"},"referenced_works_count":38,"referenced_works":["https://openalex.org/W647019332","https://openalex.org/W1121458180","https://openalex.org/W1485044783","https://openalex.org/W1500276280","https://openalex.org/W1961584840","https://openalex.org/W1989142927","https://openalex.org/W1990966781","https://openalex.org/W2019061097","https://openalex.org/W2051497662","https://openalex.org/W2059506372","https://openalex.org/W2063519565","https://openalex.org/W2068687524","https://openalex.org/W2073302338","https://openalex.org/W2077991901","https://openalex.org/W2091922579","https://openalex.org/W2101694541","https://openalex.org/W2118001436","https://openalex.org/W2120330409","https://openalex.org/W2123683849","https://openalex.org/W2124141867","https://openalex.org/W2124190365","https://openalex.org/W2125410475","https://openalex.org/W2129628333","https://openalex.org/W2131988453","https://openalex.org/W2142678031","https://openalex.org/W2142703058","https://openalex.org/W2145107779","https://openalex.org/W2150605939","https://openalex.org/W2152885278","https://openalex.org/W2154026962","https://openalex.org/W2155066423","https://openalex.org/W2158545096","https://openalex.org/W2164814717","https://openalex.org/W2166865790","https://openalex.org/W2171020662","https://openalex.org/W2427274663","https://openalex.org/W4248176371","https://openalex.org/W6669879809"],"related_works":["https://openalex.org/W2123752772","https://openalex.org/W3007830711","https://openalex.org/W2002707838","https://openalex.org/W2790775786","https://openalex.org/W2019531245","https://openalex.org/W2979293251","https://openalex.org/W2910961041","https://openalex.org/W84426547","https://openalex.org/W4387904060","https://openalex.org/W3170528367"],"abstract_inverted_index":{"SILVA":[0,32,62,90],"(from":[1],"Latin":[2],"silva,":[3],"forest,":[4],"http://www.arb-silva.de)":[5],"is":[6],"a":[7,34,102],"comprehensive":[8],"resource":[9],"for":[10,38,49,83],"up-to-date":[11],"quality-controlled":[12],"databases":[13],"of":[14,42,88,120],"aligned":[15],"ribosomal":[16],"RNA":[17],"(rRNA)":[18],"gene":[19],"sequences":[20],"from":[21],"the":[22,50,59,61,67,76,79,86,89,106,123],"Bacteria,":[23],"Archaea":[24],"and":[25,28,52,85,94,118],"Eukaryota":[26],"domains":[27,41],"supplementary":[29],"online":[30],"services.":[31],"provides":[33],"manually":[35],"curated":[36],"taxonomy":[37,63,91],"all":[39],"three":[40,124],"life,":[43],"based":[44],"on":[45,75],"representative":[46],"phylogenetic":[47],"trees":[48],"small-":[51],"large-subunit":[53],"rRNA":[54],"genes.":[55],"This":[56],"article":[57],"describes":[58],"improvements":[60],"has":[64],"undergone":[65],"in":[66,115],"last":[68],"3":[69],"years.":[70],"Specifically":[71],"we":[72],"are":[73],"focusing":[74],"curation":[77,84],"process,":[78],"various":[80],"resources":[81],"used":[82],"comparison":[87],"with":[92],"Greengenes":[93],"RDP-II":[95],"taxonomies.":[96],"Our":[97],"comparisons":[98],"not":[99],"only":[100],"revealed":[101],"reasonable":[103],"overlap":[104],"between":[105,122],"taxa":[107,121],"names,":[108],"but":[109],"also":[110],"points":[111],"to":[112],"significant":[113],"differences":[114],"both":[116],"names":[117],"numbers":[119],"resources.":[125]},"counts_by_year":[{"year":2026,"cited_by_count":232},{"year":2025,"cited_by_count":540},{"year":2024,"cited_by_count":610},{"year":2023,"cited_by_count":519},{"year":2022,"cited_by_count":545},{"year":2021,"cited_by_count":559},{"year":2020,"cited_by_count":414},{"year":2019,"cited_by_count":277},{"year":2018,"cited_by_count":210},{"year":2017,"cited_by_count":106},{"year":2016,"cited_by_count":64},{"year":2015,"cited_by_count":45},{"year":2014,"cited_by_count":17},{"year":2013,"cited_by_count":1}],"updated_date":"2026-06-25T08:15:23.626066","created_date":"2025-10-10T00:00:00"}
