{"id":"https://openalex.org/W4212988433","doi":"https://doi.org/10.1093/nar/gkt1206","title":"The European Bioinformatics Institute\u2019s data resources 2014","display_name":"The European Bioinformatics Institute\u2019s data resources 2014","publication_year":2013,"publication_date":"2013-11-23","ids":{"openalex":"https://openalex.org/W4212988433","doi":"https://doi.org/10.1093/nar/gkt1206"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkt1206","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkt1206","pdf_url":"https://academic.oup.com/nar/article-pdf/42/D1/D18/3633761/gkt1206.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/42/D1/D18/3633761/gkt1206.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5057729973","display_name":"Cath Brooksbank","orcid":"https://orcid.org/0000-0001-9395-7001"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I87048295"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Catherine Brooksbank","raw_affiliation_strings":["European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK","institution_ids":["https://openalex.org/I1303153112","https://openalex.org/I87048295"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016562788","display_name":"Mary Todd Bergman","orcid":"https://orcid.org/0000-0002-7033-5362"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I87048295"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Mary Todd Bergman","raw_affiliation_strings":["European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK","institution_ids":["https://openalex.org/I1303153112","https://openalex.org/I87048295"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066667859","display_name":"Rolf Apweiler","orcid":"https://orcid.org/0000-0001-7078-200X"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I87048295"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Rolf Apweiler","raw_affiliation_strings":["European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK","institution_ids":["https://openalex.org/I1303153112","https://openalex.org/I87048295"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061379058","display_name":"Ewan Birney","orcid":"https://orcid.org/0000-0001-8314-8497"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I87048295"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Ewan Birney","raw_affiliation_strings":["European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK","institution_ids":["https://openalex.org/I1303153112","https://openalex.org/I87048295"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5068874280","display_name":"Janet M. Thornton","orcid":"https://orcid.org/0000-0003-0824-4096"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I87048295"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Janet Thornton","raw_affiliation_strings":["European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK","institution_ids":["https://openalex.org/I1303153112","https://openalex.org/I87048295"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5057729973"],"corresponding_institution_ids":["https://openalex.org/I1303153112","https://openalex.org/I87048295"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":4.5723,"has_fulltext":false,"cited_by_count":60,"citation_normalized_percentile":{"value":0.95650081,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"42","issue":"D1","first_page":"D18","last_page":"D25"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7444299459457397},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.45637571811676025},{"id":"https://openalex.org/keywords/complement","display_name":"Complement (music)","score":0.4240984320640564},{"id":"https://openalex.org/keywords/library-science","display_name":"Library science","score":0.41713467240333557},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.38034215569496155},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.33010566234588623},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.22371938824653625},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.15896391868591309},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.08703368902206421}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7444299459457397},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.45637571811676025},{"id":"https://openalex.org/C112313634","wikidata":"https://www.wikidata.org/wiki/Q7886648","display_name":"Complement (music)","level":5,"score":0.4240984320640564},{"id":"https://openalex.org/C161191863","wikidata":"https://www.wikidata.org/wiki/Q199655","display_name":"Library science","level":1,"score":0.41713467240333557},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.38034215569496155},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.33010566234588623},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.22371938824653625},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.15896391868591309},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.08703368902206421},{"id":"https://openalex.org/C127716648","wikidata":"https://www.wikidata.org/wiki/Q104053","display_name":"Phenotype","level":3,"score":0.0},{"id":"https://openalex.org/C188082640","wikidata":"https://www.wikidata.org/wiki/Q1780899","display_name":"Complementation","level":4,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1093/nar/gkt1206","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkt1206","pdf_url":"https://academic.oup.com/nar/article-pdf/42/D1/D18/3633761/gkt1206.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmh:oai:europepmc.org:2943104","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3964968","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkt1206","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkt1206","pdf_url":"https://academic.oup.com/nar/article-pdf/42/D1/D18/3633761/gkt1206.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.5,"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320311904","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08"},{"id":"https://openalex.org/F4320313288","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52"},{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320334626","display_name":"Medical Research Council","ror":"https://ror.org/03x94j517"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":53,"referenced_works":["https://openalex.org/W174102300","https://openalex.org/W1566952502","https://openalex.org/W1806630989","https://openalex.org/W1964550430","https://openalex.org/W1964831918","https://openalex.org/W1965091013","https://openalex.org/W1966848751","https://openalex.org/W1970525140","https://openalex.org/W1987847236","https://openalex.org/W1995683190","https://openalex.org/W2000388030","https://openalex.org/W2021559748","https://openalex.org/W2021574953","https://openalex.org/W2057970678","https://openalex.org/W2061616850","https://openalex.org/W2069928158","https://openalex.org/W2081930221","https://openalex.org/W2094953050","https://openalex.org/W2100773022","https://openalex.org/W2104317456","https://openalex.org/W2104570606","https://openalex.org/W2106577431","https://openalex.org/W2109872885","https://openalex.org/W2111023940","https://openalex.org/W2114370721","https://openalex.org/W2116423958","https://openalex.org/W2116868464","https://openalex.org/W2118140755","https://openalex.org/W2120793040","https://openalex.org/W2129370330","https://openalex.org/W2143392414","https://openalex.org/W2143784594","https://openalex.org/W2146235863","https://openalex.org/W2146256775","https://openalex.org/W2147018385","https://openalex.org/W2147783737","https://openalex.org/W2152282949","https://openalex.org/W2154331071","https://openalex.org/W2155372661","https://openalex.org/W2156111363","https://openalex.org/W2157918066","https://openalex.org/W2159084616","https://openalex.org/W2165253681","https://openalex.org/W2167470356","https://openalex.org/W2170463736","https://openalex.org/W2259938310","https://openalex.org/W4210290733","https://openalex.org/W4212920271","https://openalex.org/W4230612844","https://openalex.org/W4232154957","https://openalex.org/W4239833383","https://openalex.org/W4320301318","https://openalex.org/W6655856327"],"related_works":["https://openalex.org/W2382566571","https://openalex.org/W2349321798","https://openalex.org/W2366686860","https://openalex.org/W2350859087","https://openalex.org/W2387118502","https://openalex.org/W4233775131","https://openalex.org/W2391262724","https://openalex.org/W3036520466","https://openalex.org/W1986903754","https://openalex.org/W2361622496"],"abstract_inverted_index":{"Molecular":[0],"Biology":[1],"has":[2],"been":[3],"at":[4],"the":[5,8,17,30,42,47,83,86,102],"heart":[6],"of":[7,33,36,66,88,96,104],"\u2018big":[9],"data\u2019":[10],"revolution":[11],"from":[12,29],"its":[13],"very":[14],"beginning,":[15],"and":[16,39,50,92],"need":[18],"for":[19],"access":[20,73],"to":[21,53,74,100],"biological":[22],"data":[23,78],"is":[24,64],"a":[25],"common":[26],"thread":[27],"running":[28],"1965":[31],"publication":[32],"Dayhoff\u2019s":[34],"\u2018Atlas":[35],"Protein":[37],"Sequence":[38],"Structure\u2019":[40],"through":[41],"Human":[43],"Genome":[44],"Project":[45],"in":[46,109],"late":[48],"1990s":[49],"early":[51],"2000s":[52],"today\u2019s":[54],"population-scale":[55],"sequencing":[56],"initiatives.":[57],"The":[58],"European":[59],"Bioinformatics":[60],"Institute":[61],"(EMBL-EBI;":[62],"http://www.ebi.ac.uk)":[63],"one":[65],"three":[67],"organizations":[68],"worldwide":[69],"that":[70],"provides":[71],"free":[72],"comprehensive,":[75],"integrated":[76],"molecular":[77],"sets.":[79],"Here,":[80],"we":[81],"summarize":[82],"principles":[84],"underpinning":[85],"development":[87],"these":[89],"public":[90],"resources":[91],"provide":[93],"an":[94],"overview":[95],"EMBL-EBI\u2019s":[97],"database":[98],"collection":[99],"complement":[101],"reviews":[103],"individual":[105],"databases":[106],"provided":[107],"elsewhere":[108],"this":[110],"issue.":[111]},"counts_by_year":[{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":3},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":8},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":6},{"year":2016,"cited_by_count":10},{"year":2015,"cited_by_count":15},{"year":2014,"cited_by_count":6}],"updated_date":"2026-05-19T21:40:30.786675","created_date":"2025-10-10T00:00:00"}
