{"id":"https://openalex.org/W1987916789","doi":"https://doi.org/10.1093/nar/gkt1183","title":"MycoCosm portal: gearing up for 1000 fungal genomes","display_name":"MycoCosm portal: gearing up for 1000 fungal genomes","publication_year":2013,"publication_date":"2013-12-01","ids":{"openalex":"https://openalex.org/W1987916789","doi":"https://doi.org/10.1093/nar/gkt1183","mag":"1987916789","pmid":"https://pubmed.ncbi.nlm.nih.gov/24297253"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkt1183","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkt1183","pdf_url":"https://academic.oup.com/nar/article-pdf/42/D1/D699/3619942/gkt1183.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/42/D1/D699/3619942/gkt1183.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5007647654","display_name":"Igor V. Grigoriev","orcid":"https://orcid.org/0000-0002-3136-8903"},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Igor V. Grigoriev","raw_affiliation_strings":["US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA","US Department of Energy Joint Genome Institute; 2800 Mitchell Drive; Walnut Creek; CA; 94598; USA"],"affiliations":[{"raw_affiliation_string":"US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA","institution_ids":["https://openalex.org/I196679689"]},{"raw_affiliation_string":"US Department of Energy Joint Genome Institute; 2800 Mitchell Drive; Walnut Creek; CA; 94598; USA","institution_ids":["https://openalex.org/I196679689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071942265","display_name":"Roman Nikitin","orcid":null},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Roman Nikitin","raw_affiliation_strings":["US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA","US Department of Energy Joint Genome Institute; 2800 Mitchell Drive; Walnut Creek; CA; 94598; USA"],"affiliations":[{"raw_affiliation_string":"US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA","institution_ids":["https://openalex.org/I196679689"]},{"raw_affiliation_string":"US Department of Energy Joint Genome Institute; 2800 Mitchell Drive; Walnut Creek; CA; 94598; USA","institution_ids":["https://openalex.org/I196679689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031889894","display_name":"Sajeet Haridas","orcid":"https://orcid.org/0000-0002-0229-0975"},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sajeet Haridas","raw_affiliation_strings":["US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA","US Department of Energy Joint Genome Institute; 2800 Mitchell Drive; Walnut Creek; CA; 94598; USA"],"affiliations":[{"raw_affiliation_string":"US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA","institution_ids":["https://openalex.org/I196679689"]},{"raw_affiliation_string":"US Department of Energy Joint Genome Institute; 2800 Mitchell Drive; Walnut Creek; CA; 94598; USA","institution_ids":["https://openalex.org/I196679689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049521639","display_name":"Alan Kuo","orcid":"https://orcid.org/0000-0003-3514-3530"},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alan Kuo","raw_affiliation_strings":["US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA","US Department of Energy Joint Genome Institute; 2800 Mitchell Drive; Walnut Creek; CA; 94598; USA"],"affiliations":[{"raw_affiliation_string":"US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA","institution_ids":["https://openalex.org/I196679689"]},{"raw_affiliation_string":"US Department of Energy Joint Genome Institute; 2800 Mitchell Drive; Walnut Creek; CA; 94598; USA","institution_ids":["https://openalex.org/I196679689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002783785","display_name":"Robin A. Ohm","orcid":"https://orcid.org/0000-0003-2548-0074"},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Robin Ohm","raw_affiliation_strings":["US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA","US Department of Energy Joint Genome Institute; 2800 Mitchell Drive; Walnut Creek; CA; 94598; USA"],"affiliations":[{"raw_affiliation_string":"US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA","institution_ids":["https://openalex.org/I196679689"]},{"raw_affiliation_string":"US Department of Energy Joint Genome Institute; 2800 Mitchell Drive; Walnut Creek; CA; 94598; USA","institution_ids":["https://openalex.org/I196679689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090246054","display_name":"Robert Otillar","orcid":null},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Robert Otillar","raw_affiliation_strings":["US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA","US Department of Energy Joint Genome Institute; 2800 Mitchell Drive; Walnut Creek; CA; 94598; USA"],"affiliations":[{"raw_affiliation_string":"US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA","institution_ids":["https://openalex.org/I196679689"]},{"raw_affiliation_string":"US Department of Energy Joint Genome Institute; 2800 Mitchell Drive; Walnut Creek; CA; 94598; USA","institution_ids":["https://openalex.org/I196679689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054436791","display_name":"Robert Riley","orcid":"https://orcid.org/0000-0003-0224-0975"},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Robert Riley","raw_affiliation_strings":["US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA","US Department of Energy Joint Genome Institute; 2800 Mitchell Drive; Walnut Creek; CA; 94598; USA"],"affiliations":[{"raw_affiliation_string":"US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA","institution_ids":["https://openalex.org/I196679689"]},{"raw_affiliation_string":"US Department of Energy Joint Genome Institute; 2800 Mitchell Drive; Walnut Creek; CA; 94598; USA","institution_ids":["https://openalex.org/I196679689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051229050","display_name":"Asaf Salamov","orcid":"https://orcid.org/0000-0002-3349-8138"},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Asaf Salamov","raw_affiliation_strings":["US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA","US Department of Energy Joint Genome Institute; 2800 Mitchell Drive; Walnut Creek; CA; 94598; USA"],"affiliations":[{"raw_affiliation_string":"US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA","institution_ids":["https://openalex.org/I196679689"]},{"raw_affiliation_string":"US Department of Energy Joint Genome Institute; 2800 Mitchell Drive; Walnut Creek; CA; 94598; USA","institution_ids":["https://openalex.org/I196679689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009395968","display_name":"Xueling Zhao","orcid":null},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xueling Zhao","raw_affiliation_strings":["US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA","US Department of Energy Joint Genome Institute; 2800 Mitchell Drive; Walnut Creek; CA; 94598; USA"],"affiliations":[{"raw_affiliation_string":"US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA","institution_ids":["https://openalex.org/I196679689"]},{"raw_affiliation_string":"US Department of Energy Joint Genome Institute; 2800 Mitchell Drive; Walnut Creek; CA; 94598; USA","institution_ids":["https://openalex.org/I196679689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066820625","display_name":"Frank Korzeniewski","orcid":null},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Frank Korzeniewski","raw_affiliation_strings":["US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA","US Department of Energy Joint Genome Institute; 2800 Mitchell Drive; Walnut Creek; CA; 94598; USA"],"affiliations":[{"raw_affiliation_string":"US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA","institution_ids":["https://openalex.org/I196679689"]},{"raw_affiliation_string":"US Department of Energy Joint Genome Institute; 2800 Mitchell Drive; Walnut Creek; CA; 94598; USA","institution_ids":["https://openalex.org/I196679689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021107850","display_name":"Tatyana I. Smirnova","orcid":"https://orcid.org/0000-0001-7867-7116"},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Tatyana Smirnova","raw_affiliation_strings":["US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA","US Department of Energy Joint Genome Institute; 2800 Mitchell Drive; Walnut Creek; CA; 94598; USA"],"affiliations":[{"raw_affiliation_string":"US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA","institution_ids":["https://openalex.org/I196679689"]},{"raw_affiliation_string":"US Department of Energy Joint Genome Institute; 2800 Mitchell Drive; Walnut Creek; CA; 94598; USA","institution_ids":["https://openalex.org/I196679689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021637804","display_name":"Henrik Nordberg","orcid":null},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Henrik Nordberg","raw_affiliation_strings":["US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA","US Department of Energy Joint Genome Institute; 2800 Mitchell Drive; Walnut Creek; CA; 94598; USA"],"affiliations":[{"raw_affiliation_string":"US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA","institution_ids":["https://openalex.org/I196679689"]},{"raw_affiliation_string":"US Department of Energy Joint Genome Institute; 2800 Mitchell Drive; Walnut Creek; CA; 94598; USA","institution_ids":["https://openalex.org/I196679689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107834893","display_name":"Inna Dubchak","orcid":null},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Inna Dubchak","raw_affiliation_strings":["US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA","US Department of Energy Joint Genome Institute; 2800 Mitchell Drive; Walnut Creek; CA; 94598; USA"],"affiliations":[{"raw_affiliation_string":"US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA","institution_ids":["https://openalex.org/I196679689"]},{"raw_affiliation_string":"US Department of Energy Joint Genome Institute; 2800 Mitchell Drive; Walnut Creek; CA; 94598; USA","institution_ids":["https://openalex.org/I196679689"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5070737443","display_name":"Igor Shabalov","orcid":null},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Igor Shabalov","raw_affiliation_strings":["US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA","US Department of Energy Joint Genome Institute; 2800 Mitchell Drive; Walnut Creek; CA; 94598; USA"],"affiliations":[{"raw_affiliation_string":"US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA","institution_ids":["https://openalex.org/I196679689"]},{"raw_affiliation_string":"US Department of Energy Joint Genome Institute; 2800 Mitchell Drive; Walnut Creek; CA; 94598; USA","institution_ids":["https://openalex.org/I196679689"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":14,"corresponding_author_ids":["https://openalex.org/A5007647654"],"corresponding_institution_ids":["https://openalex.org/I196679689"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":26.2793,"has_fulltext":true,"cited_by_count":1556,"citation_normalized_percentile":{"value":0.99907719,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"42","issue":"D1","first_page":"D699","last_page":"D704"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10825","display_name":"Plant Pathogens and Fungal Diseases","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10825","display_name":"Plant Pathogens and Fungal Diseases","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10451","display_name":"Mycorrhizal Fungi and Plant Interactions","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9883000254631042,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.9102450609207153},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.6890543103218079},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.6207792162895203},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.568189799785614},{"id":"https://openalex.org/keywords/nomination","display_name":"Nomination","score":0.5565963387489319},{"id":"https://openalex.org/keywords/comparative-genomics","display_name":"Comparative genomics","score":0.5298842191696167},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4803382158279419},{"id":"https://openalex.org/keywords/tree-of-life","display_name":"Tree of life (biology)","score":0.4307047426700592},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.27132371068000793},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.25645995140075684},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.16994023323059082},{"id":"https://openalex.org/keywords/phylogenetics","display_name":"Phylogenetics","score":0.1628037393093109}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.9102450609207153},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.6890543103218079},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6207792162895203},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.568189799785614},{"id":"https://openalex.org/C2775925287","wikidata":"https://www.wikidata.org/wiki/Q1156895","display_name":"Nomination","level":2,"score":0.5565963387489319},{"id":"https://openalex.org/C105176652","wikidata":"https://www.wikidata.org/wiki/Q1147112","display_name":"Comparative genomics","level":5,"score":0.5298842191696167},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4803382158279419},{"id":"https://openalex.org/C124388736","wikidata":"https://www.wikidata.org/wiki/Q3247497","display_name":"Tree of life (biology)","level":4,"score":0.4307047426700592},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.27132371068000793},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.25645995140075684},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.16994023323059082},{"id":"https://openalex.org/C90132467","wikidata":"https://www.wikidata.org/wiki/Q171184","display_name":"Phylogenetics","level":3,"score":0.1628037393093109},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D005658","descriptor_name":"Fungi","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D005658","descriptor_name":"Fungi","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D005658","descriptor_name":"Fungi","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D005658","descriptor_name":"Fungi","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005658","descriptor_name":"Fungi","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005658","descriptor_name":"Fungi","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016681","descriptor_name":"Genome, Fungal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016681","descriptor_name":"Genome, Fungal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016681","descriptor_name":"Genome, Fungal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":8,"locations":[{"id":"doi:10.1093/nar/gkt1183","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkt1183","pdf_url":"https://academic.oup.com/nar/article-pdf/42/D1/D699/3619942/gkt1183.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:24297253","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24297253","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:doi:10.25504/fairsharing.57e208","is_oa":false,"landing_page_url":"https://mycocosm.jgi.doe.gov/mycocosm/home","pdf_url":null,"source":{"id":"https://openalex.org/S4406922384","display_name":"Open MIND","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},{"id":"pmh:oai:escholarship.org/ark:/13030/qt3z97w2b6","is_oa":false,"landing_page_url":"https://escholarship.org/uc/item/3z97w2b6","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"article"},{"id":"pmh:oai:europepmc.org:2943225","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3965089","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:qt3z97w2b6","is_oa":false,"landing_page_url":"http://www.escholarship.org/uc/item/3z97w2b6","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Grigoriev, Igor V.; Nikitin, Roman; Haridas, Sajeet; Kuo, Alan; Ohm, Robin; Riley, Robert; \u00c2\u00a0et al.(2013). MycoCosm portal: gearing up for 1000 fungal genomes. Nucleic Acids Research. Lawrence Berkeley National Laboratory: Lawrence Berkeley National Laboratory. Retrieved from: http://www.escholarship.org/uc/item/3z97w2b6","raw_type":"article"},{"id":"doi:10.25504/fairsharing.57e208","is_oa":true,"landing_page_url":"https://doi.org/10.25504/fairsharing.57e208","pdf_url":null,"source":{"id":"https://openalex.org/S7407053452","display_name":"FAIRsharing.org","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"dataset"},{"id":"doi:10.25504/fairsharing.8e2b95","is_oa":true,"landing_page_url":"https://doi.org/10.25504/fairsharing.8e2b95","pdf_url":null,"source":{"id":"https://openalex.org/S7407053452","display_name":"FAIRsharing.org","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"dataset"}],"best_oa_location":{"id":"doi:10.1093/nar/gkt1183","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkt1183","pdf_url":"https://academic.oup.com/nar/article-pdf/42/D1/D699/3619942/gkt1183.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1286236842","display_name":null,"funder_award_id":"-AC02-05CH11231","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G1337544421","display_name":null,"funder_award_id":"05CH11231","funder_id":"https://openalex.org/F4320337509","funder_display_name":"Biological and Environmental Research"},{"id":"https://openalex.org/G3083819904","display_name":null,"funder_award_id":"05CH11231","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G3944918260","display_name":null,"funder_award_id":"DE-AC02-05CH11231","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G425189044","display_name":null,"funder_award_id":"DE-AC02-05CH","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G4501827968","display_name":null,"funder_award_id":"AC02-05CH11231","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G4565140552","display_name":null,"funder_award_id":"-AC02-05CH11231","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G4841871747","display_name":null,"funder_award_id":"DE_AC02-05CH11231","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G498139845","display_name":null,"funder_award_id":"DE-AC02","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G5315912995","display_name":null,"funder_award_id":"11231","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G5439719329","display_name":null,"funder_award_id":"DE-AC02-05CH11231]","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G5802748842","display_name":null,"funder_award_id":"DE-AC02-05CH112","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G6330738325","display_name":null,"funder_award_id":"DE_AC02_05CH11231","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G6348972864","display_name":null,"funder_award_id":"AC02-05CH11231","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G6429026066","display_name":null,"funder_award_id":"DE-AC02-05CH112","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G6558272803","display_name":null,"funder_award_id":"DE-AC02","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G7340683655","display_name":null,"funder_award_id":"E-AC02-05CH11231","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G7406122311","display_name":null,"funder_award_id":"AC02-05CH1123","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G7629237052","display_name":null,"funder_award_id":"DE-AC02-05CH11231","funder_id":"https://openalex.org/F4320337509","funder_display_name":"Biological and Environmental Research"},{"id":"https://openalex.org/G7664691372","display_name":null,"funder_award_id":"DE-AC02-05CH1123","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G7787287669","display_name":null,"funder_award_id":"AC02-05CH11231","funder_id":"https://openalex.org/F4320337509","funder_display_name":"Biological and Environmental Research"},{"id":"https://openalex.org/G7825954517","display_name":null,"funder_award_id":"DE-AC02-05CH1123","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G8413608756","display_name":null,"funder_award_id":"DE-AC02-05CH1123","funder_id":"https://openalex.org/F4320337509","funder_display_name":"Biological and Environmental Research"},{"id":"https://openalex.org/G8414908677","display_name":null,"funder_award_id":"DE-AC0","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G897164627","display_name":null,"funder_award_id":"DE-AC02_05CH11231","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G969889393","display_name":null,"funder_award_id":"DE-AC02-","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"}],"funders":[{"id":"https://openalex.org/F4320306084","display_name":"U.S. Department of Energy","ror":"https://ror.org/01bj3aw27"},{"id":"https://openalex.org/F4320332359","display_name":"Office of Science","ror":"https://ror.org/00mmn6b08"},{"id":"https://openalex.org/F4320337509","display_name":"Biological and Environmental Research","ror":"https://ror.org/0114b2m14"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1987916789.pdf","grobid_xml":"https://content.openalex.org/works/W1987916789.grobid-xml"},"referenced_works_count":42,"referenced_works":["https://openalex.org/W1566952502","https://openalex.org/W1586898654","https://openalex.org/W1780611548","https://openalex.org/W1973047225","https://openalex.org/W1982390665","https://openalex.org/W1985471440","https://openalex.org/W1987916789","https://openalex.org/W1996974192","https://openalex.org/W1998602558","https://openalex.org/W1998767819","https://openalex.org/W2000818024","https://openalex.org/W2022414939","https://openalex.org/W2027448315","https://openalex.org/W2033174994","https://openalex.org/W2033713984","https://openalex.org/W2067964678","https://openalex.org/W2094201044","https://openalex.org/W2102221598","https://openalex.org/W2105007918","https://openalex.org/W2107885386","https://openalex.org/W2108787198","https://openalex.org/W2109418651","https://openalex.org/W2113634873","https://openalex.org/W2116423958","https://openalex.org/W2119787018","https://openalex.org/W2122427889","https://openalex.org/W2124166542","https://openalex.org/W2128242967","https://openalex.org/W2130956021","https://openalex.org/W2140413947","https://openalex.org/W2141885858","https://openalex.org/W2145876138","https://openalex.org/W2146071936","https://openalex.org/W2147790590","https://openalex.org/W2151177060","https://openalex.org/W2152770371","https://openalex.org/W2165876708","https://openalex.org/W2605068739","https://openalex.org/W2916083703","https://openalex.org/W4212920271","https://openalex.org/W4320301318","https://openalex.org/W6677311404"],"related_works":["https://openalex.org/W1493660383","https://openalex.org/W2759519215","https://openalex.org/W4318240630","https://openalex.org/W2353729507","https://openalex.org/W2350466590","https://openalex.org/W1542620732","https://openalex.org/W3031625301","https://openalex.org/W4308713831","https://openalex.org/W2309256906","https://openalex.org/W4386771068"],"abstract_inverted_index":{"MycoCosm":[0,36,72],"is":[1],"a":[2],"fungal":[3,24,88],"genomics":[4,89],"portal":[5],"(http://jgi.doe.gov/fungi),":[6],"developed":[7],"by":[8,31],"the":[9,45,55,67,82],"US":[10],"Department":[11],"of":[12,23,47,50,59,70,86],"Energy":[13],"Joint":[14],"Genome":[15],"Institute":[16],"to":[17],"support":[18],"integration,":[19],"analysis":[20,58],"and":[21,27,39,54,57,81],"dissemination":[22],"genome":[25],"sequences":[26],"other":[28],"'omics'":[29],"data":[30],"providing":[32],"interactive":[33],"web-based":[34],"tools.":[35],"also":[37],"promotes":[38],"facilitates":[40],"user":[41],"community":[42],"participation":[43],"through":[44],"nomination":[46],"new":[48],"species":[49],"fungi":[51],"for":[52],"sequencing,":[53],"annotation":[56],"resulting":[60],"data.":[61],"By":[62],"efficiently":[63],"filling":[64],"gaps":[65],"in":[66],"Fungal":[68],"Tree":[69],"Life,":[71],"will":[73],"help":[74],"address":[75],"important":[76],"problems":[77],"associated":[78],"with":[79],"energy":[80],"environment,":[83],"taking":[84],"advantage":[85],"growing":[87],"resources.":[90]},"counts_by_year":[{"year":2026,"cited_by_count":39},{"year":2025,"cited_by_count":152},{"year":2024,"cited_by_count":186},{"year":2023,"cited_by_count":168},{"year":2022,"cited_by_count":166},{"year":2021,"cited_by_count":178},{"year":2020,"cited_by_count":145},{"year":2019,"cited_by_count":139},{"year":2018,"cited_by_count":121},{"year":2017,"cited_by_count":99},{"year":2016,"cited_by_count":72},{"year":2015,"cited_by_count":66},{"year":2014,"cited_by_count":21},{"year":2013,"cited_by_count":2}],"updated_date":"2026-04-14T08:04:32.555800","created_date":"2016-06-24T00:00:00"}