{"id":"https://openalex.org/W2143370123","doi":"https://doi.org/10.1093/nar/gkt1175","title":"RepeatsDB: a database of tandem repeat protein structures","display_name":"RepeatsDB: a database of tandem repeat protein structures","publication_year":2013,"publication_date":"2013-12-05","ids":{"openalex":"https://openalex.org/W2143370123","doi":"https://doi.org/10.1093/nar/gkt1175","mag":"2143370123","pmid":"https://pubmed.ncbi.nlm.nih.gov/24311564"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkt1175","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkt1175","pdf_url":"https://academic.oup.com/nar/article-pdf/42/D1/D352/3613653/gkt1175.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/42/D1/D352/3613653/gkt1175.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5047166754","display_name":"Tom\u00e1s Di Domenico","orcid":"https://orcid.org/0000-0003-2887-815X"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I138689650","display_name":"University of Padua","ror":"https://ror.org/00240q980","country_code":"IT","type":"education","lineage":["https://openalex.org/I138689650"]},{"id":"https://openalex.org/I16076960","display_name":"COMSATS University Islamabad","ror":"https://ror.org/00nqqvk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I16076960"]}],"countries":["FR","IT","PK"],"is_corresponding":false,"raw_author_name":"Tom\u00e1s Di Domenico","raw_affiliation_strings":["Department of Biomedical Sciences, University of Padua, 35131 Padova, Italy, Department of Biological Chemistry, Universidad de Buenos Aires, Buenos Aires C1428EGA, Argentina, Department of Information Engineering, University of Padua, 35121 Padova, Italy, Department of Biosciences, COMSATS Institute of Information Technology, Sahiwal, Pakistan, Centre de Recherches de Biochimie Macromol\u00e9culaire, CNRS, 34293 Montpellier Cedex 5, France and Institut de Biologie Computationnelle, 34293 Montpellier Cedex 5, France","COMSATS University Islamabad, Islamabad, Pakistan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Sciences, University of Padua, 35131 Padova, Italy, Department of Biological Chemistry, Universidad de Buenos Aires, Buenos Aires C1428EGA, Argentina, Department of Information Engineering, University of Padua, 35121 Padova, Italy, Department of Biosciences, COMSATS Institute of Information Technology, Sahiwal, Pakistan, Centre de Recherches de Biochimie Macromol\u00e9culaire, CNRS, 34293 Montpellier Cedex 5, France and Institut de Biologie Computationnelle, 34293 Montpellier Cedex 5, France","institution_ids":["https://openalex.org/I138689650","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"COMSATS University Islamabad, Islamabad, Pakistan","institution_ids":["https://openalex.org/I16076960"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002285840","display_name":"Emilio Potenza","orcid":"https://orcid.org/0000-0002-8346-2432"},"institutions":[{"id":"https://openalex.org/I16076960","display_name":"COMSATS University Islamabad","ror":"https://ror.org/00nqqvk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I16076960"]}],"countries":["PK"],"is_corresponding":false,"raw_author_name":"Emilio Potenza","raw_affiliation_strings":["COMSATS University Islamabad, Islamabad, Pakistan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"COMSATS University Islamabad, Islamabad, Pakistan","institution_ids":["https://openalex.org/I16076960"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060625212","display_name":"Ian Walsh","orcid":"https://orcid.org/0000-0003-3994-5522"},"institutions":[{"id":"https://openalex.org/I16076960","display_name":"COMSATS University Islamabad","ror":"https://ror.org/00nqqvk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I16076960"]}],"countries":["PK"],"is_corresponding":false,"raw_author_name":"Ian Walsh","raw_affiliation_strings":["COMSATS University Islamabad, Islamabad, Pakistan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"COMSATS University Islamabad, Islamabad, Pakistan","institution_ids":["https://openalex.org/I16076960"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019958241","display_name":"R. Gonzalo Parra","orcid":"https://orcid.org/0000-0003-2446-016X"},"institutions":[{"id":"https://openalex.org/I16076960","display_name":"COMSATS University Islamabad","ror":"https://ror.org/00nqqvk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I16076960"]}],"countries":["PK"],"is_corresponding":false,"raw_author_name":"R. Gonzalo Parra","raw_affiliation_strings":["COMSATS University Islamabad, Islamabad, Pakistan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"COMSATS University Islamabad, Islamabad, Pakistan","institution_ids":["https://openalex.org/I16076960"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087447838","display_name":"Manuel Giollo","orcid":"https://orcid.org/0000-0001-9434-2383"},"institutions":[{"id":"https://openalex.org/I16076960","display_name":"COMSATS University Islamabad","ror":"https://ror.org/00nqqvk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I16076960"]}],"countries":["PK"],"is_corresponding":false,"raw_author_name":"Manuel Giollo","raw_affiliation_strings":["COMSATS University Islamabad, Islamabad, Pakistan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"COMSATS University Islamabad, Islamabad, Pakistan","institution_ids":["https://openalex.org/I16076960"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046118465","display_name":"Giovanni Minervini","orcid":"https://orcid.org/0000-0001-7013-5785"},"institutions":[{"id":"https://openalex.org/I16076960","display_name":"COMSATS University Islamabad","ror":"https://ror.org/00nqqvk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I16076960"]}],"countries":["PK"],"is_corresponding":false,"raw_author_name":"Giovanni Minervini","raw_affiliation_strings":["COMSATS University Islamabad, Islamabad, Pakistan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"COMSATS University Islamabad, Islamabad, Pakistan","institution_ids":["https://openalex.org/I16076960"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000882827","display_name":"Damiano Piovesan","orcid":"https://orcid.org/0000-0001-8210-2390"},"institutions":[{"id":"https://openalex.org/I16076960","display_name":"COMSATS University Islamabad","ror":"https://ror.org/00nqqvk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I16076960"]}],"countries":["PK"],"is_corresponding":false,"raw_author_name":"Damiano Piovesan","raw_affiliation_strings":["COMSATS University Islamabad, Islamabad, Pakistan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"COMSATS University Islamabad, Islamabad, Pakistan","institution_ids":["https://openalex.org/I16076960"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077311855","display_name":"Awais Ihsan","orcid":"https://orcid.org/0000-0002-4738-1619"},"institutions":[{"id":"https://openalex.org/I16076960","display_name":"COMSATS University Islamabad","ror":"https://ror.org/00nqqvk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I16076960"]}],"countries":["PK"],"is_corresponding":false,"raw_author_name":"Awais Ihsan","raw_affiliation_strings":["COMSATS University Islamabad, Islamabad, Pakistan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"COMSATS University Islamabad, Islamabad, Pakistan","institution_ids":["https://openalex.org/I16076960"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029176853","display_name":"Carlo Ferrari","orcid":"https://orcid.org/0000-0003-3665-0446"},"institutions":[{"id":"https://openalex.org/I16076960","display_name":"COMSATS University Islamabad","ror":"https://ror.org/00nqqvk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I16076960"]}],"countries":["PK"],"is_corresponding":false,"raw_author_name":"Carlo Ferrari","raw_affiliation_strings":["COMSATS University Islamabad, Islamabad, Pakistan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"COMSATS University Islamabad, Islamabad, Pakistan","institution_ids":["https://openalex.org/I16076960"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048846433","display_name":"Andrey V. Kajava","orcid":"https://orcid.org/0000-0002-2342-6886"},"institutions":[{"id":"https://openalex.org/I16076960","display_name":"COMSATS University Islamabad","ror":"https://ror.org/00nqqvk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I16076960"]}],"countries":["PK"],"is_corresponding":false,"raw_author_name":"Andrey V. Kajava","raw_affiliation_strings":["COMSATS University Islamabad, Islamabad, Pakistan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"COMSATS University Islamabad, Islamabad, Pakistan","institution_ids":["https://openalex.org/I16076960"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5066560665","display_name":"Silvio C. E. Tosatto","orcid":"https://orcid.org/0000-0003-4525-7793"},"institutions":[{"id":"https://openalex.org/I16076960","display_name":"COMSATS University Islamabad","ror":"https://ror.org/00nqqvk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I16076960"]}],"countries":["PK"],"is_corresponding":false,"raw_author_name":"Silvio C.E. Tosatto","raw_affiliation_strings":["COMSATS University Islamabad, Islamabad, Pakistan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"COMSATS University Islamabad, Islamabad, Pakistan","institution_ids":["https://openalex.org/I16076960"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":11,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":4.6381,"has_fulltext":false,"cited_by_count":67,"citation_normalized_percentile":{"value":0.95675374,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"42","issue":"D1","first_page":"D352","last_page":"D357"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10949","display_name":"Genetic Neurodegenerative Diseases","score":0.9958999752998352,"subfield":{"id":"https://openalex.org/subfields/2804","display_name":"Cellular and Molecular Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9930999875068665,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/tandem-repeat","display_name":"Tandem repeat","score":0.6922975182533264},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.684890866279602},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6233490705490112},{"id":"https://openalex.org/keywords/schema","display_name":"Schema (genetic algorithms)","score":0.53582763671875},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.44712668657302856},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4127892851829529},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3669937551021576},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.31224650144577026},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.28362712264060974},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.21730247139930725},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.16357845067977905},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.08725866675376892}],"concepts":[{"id":"https://openalex.org/C27149982","wikidata":"https://www.wikidata.org/wiki/Q3456514","display_name":"Tandem repeat","level":4,"score":0.6922975182533264},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.684890866279602},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6233490705490112},{"id":"https://openalex.org/C52146309","wikidata":"https://www.wikidata.org/wiki/Q7431116","display_name":"Schema (genetic algorithms)","level":2,"score":0.53582763671875},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.44712668657302856},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4127892851829529},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3669937551021576},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.31224650144577026},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.28362712264060974},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.21730247139930725},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.16357845067977905},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.08725866675376892}],"mesh":[{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020449","descriptor_name":"Repetitive Sequences, Amino Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020449","descriptor_name":"Repetitive Sequences, Amino Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020449","descriptor_name":"Repetitive Sequences, Amino Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/nar/gkt1175","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkt1175","pdf_url":"https://academic.oup.com/nar/article-pdf/42/D1/D352/3613653/gkt1175.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:24311564","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24311564","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.780.3139","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.780.3139","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/ae/b6/gkt1175.PMC3964956.pdf","raw_type":"text"},{"id":"pmh:oai:europepmc.org:2943092","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3964956","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:www.research.unipd.it:11577/2838148","is_oa":false,"landing_page_url":"http://hdl.handle.net/11577/2838148","pdf_url":null,"source":{"id":"https://openalex.org/S4377196283","display_name":"Research Padua  Archive (University of Padua)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I138689650","host_organization_name":"University of Padua","host_organization_lineage":["https://openalex.org/I138689650"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/nar/gkt1175","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkt1175","pdf_url":"https://academic.oup.com/nar/article-pdf/42/D1/D352/3613653/gkt1175.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":46,"referenced_works":["https://openalex.org/W133512539","https://openalex.org/W175491683","https://openalex.org/W1561055557","https://openalex.org/W1969051510","https://openalex.org/W1981045929","https://openalex.org/W2002240322","https://openalex.org/W2008238932","https://openalex.org/W2008560636","https://openalex.org/W2008592040","https://openalex.org/W2016685368","https://openalex.org/W2023167553","https://openalex.org/W2050648087","https://openalex.org/W2051119339","https://openalex.org/W2052002049","https://openalex.org/W2054681398","https://openalex.org/W2062584177","https://openalex.org/W2064419492","https://openalex.org/W2065179719","https://openalex.org/W2066688961","https://openalex.org/W2089999388","https://openalex.org/W2098914548","https://openalex.org/W2100511653","https://openalex.org/W2101335101","https://openalex.org/W2102687634","https://openalex.org/W2105961968","https://openalex.org/W2114077379","https://openalex.org/W2114604503","https://openalex.org/W2114907469","https://openalex.org/W2118245746","https://openalex.org/W2121015328","https://openalex.org/W2123130967","https://openalex.org/W2128653811","https://openalex.org/W2129328366","https://openalex.org/W2130634514","https://openalex.org/W2132505033","https://openalex.org/W2135007755","https://openalex.org/W2139477659","https://openalex.org/W2141885858","https://openalex.org/W2146637813","https://openalex.org/W2147595457","https://openalex.org/W2161880345","https://openalex.org/W2168708922","https://openalex.org/W2168757976","https://openalex.org/W2171293165","https://openalex.org/W2319822095","https://openalex.org/W4320301318"],"related_works":["https://openalex.org/W2361861616","https://openalex.org/W2263699433","https://openalex.org/W2377979023","https://openalex.org/W2218034408","https://openalex.org/W2392921965","https://openalex.org/W2358755282","https://openalex.org/W2625833328","https://openalex.org/W1533177136","https://openalex.org/W4380994516","https://openalex.org/W2556260348"],"abstract_inverted_index":{"RepeatsDB":[0,56,127],"(http://repeatsdb.bio.unipd.it/)":[1],"is":[2,128],"a":[3,14,46,88,107,141],"database":[4],"of":[5,20,109],"annotated":[6,71],"tandem":[7],"repeat":[8,32,63,78,123],"protein":[9,21,138],"structures.":[10,79],"Tandem":[11],"repeats":[12,139],"pose":[13],"difficult":[15],"problem":[16],"for":[17,121],"the":[18,24,38,72,122,148],"analysis":[19,52],"structures,":[22],"as":[23],"underlying":[25],"sequence":[26],"can":[27],"be":[28],"highly":[29],"degenerate.":[30],"Several":[31],"types":[33],"haven":[34],"been":[35],"studied":[36],"over":[37],"years,":[39],"but":[40],"their":[41],"annotation":[42],"was":[43,94],"done":[44],"in":[45,106,140],"case-by-case":[47],"basis,":[48],"thus":[49],"making":[50],"large-scale":[51],"difficult.":[53],"We":[54],"developed":[55],"to":[57,87,96,132,150],"fill":[58],"this":[59],"gap.":[60],"Using":[61],"state-of-the-art":[62],"detection":[64],"methods":[65],"and":[66,118,125,135,152],"manual":[67],"curation,":[68],"we":[69],"systematically":[70,133],"Protein":[73],"Data":[74],"Bank,":[75],"predicting":[76],"10,745":[77],"In":[80,100],"all,":[81],"2797":[82],"structures":[83],"were":[84,104],"classified":[85],"according":[86],"recently":[89],"proposed":[90],"classification":[91],"schema,":[92],"which":[93],"expanded":[95],"accommodate":[97],"new":[98],"findings.":[99],"addition,":[101],"detailed":[102],"annotations":[103,113],"performed":[105],"subset":[108],"321":[110],"proteins.":[111],"These":[112],"feature":[114],"information":[115],"on":[116],"start":[117],"end":[119],"positions":[120],"regions":[124],"units.":[126],"an":[129],"ongoing":[130],"effort":[131],"classify":[134],"annotate":[136],"structural":[137],"consistent":[142],"way.":[143],"It":[144],"provides":[145],"users":[146],"with":[147],"possibility":[149],"access":[151],"download":[153],"high-quality":[154],"datasets":[155],"either":[156],"interactively":[157],"or":[158],"programmatically":[159],"through":[160],"web":[161],"services.":[162]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":7},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":13},{"year":2015,"cited_by_count":14},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}