{"id":"https://openalex.org/W2085026450","doi":"https://doi.org/10.1093/nar/gks528","title":"VIGOR extended to annotate genomes for additional 12 different viruses","display_name":"VIGOR extended to annotate genomes for additional 12 different viruses","publication_year":2012,"publication_date":"2012-06-04","ids":{"openalex":"https://openalex.org/W2085026450","doi":"https://doi.org/10.1093/nar/gks528","mag":"2085026450","pmid":"https://pubmed.ncbi.nlm.nih.gov/22669909"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gks528","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gks528","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/nar/gks528","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5119226548","display_name":"Shiliang Wang","orcid":"https://orcid.org/0009-0002-9564-1793"},"institutions":[{"id":"https://openalex.org/I1301553790","display_name":"J. Craig Venter Institute","ror":"https://ror.org/049r1ts75","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1301553790"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Shiliang Wang","raw_affiliation_strings":["J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850","J. Craig Venter Institute; 9704 Medical Center Drive; Rockville; MD; 20850; USA"],"affiliations":[{"raw_affiliation_string":"J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850","institution_ids":["https://openalex.org/I1301553790"]},{"raw_affiliation_string":"J. Craig Venter Institute; 9704 Medical Center Drive; Rockville; MD; 20850; USA","institution_ids":["https://openalex.org/I1301553790"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084313881","display_name":"Jaideep P. Sundaram","orcid":null},"institutions":[{"id":"https://openalex.org/I1301553790","display_name":"J. Craig Venter Institute","ror":"https://ror.org/049r1ts75","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1301553790"]},{"id":"https://openalex.org/I4210100256","display_name":"BioReliance (United States)","ror":"https://ror.org/016cdf784","country_code":"US","type":"company","lineage":["https://openalex.org/I4210100256"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jaideep P. Sundaram","raw_affiliation_strings":["Genomics Department, BioReliance Corporation, 14920 Broschart Rd, Rockville, MD 20850, USA","J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850 and 2Genomics Department, BioReliance Corporation, 14920 Broschart Rd, Rockville, MD 20850, USA"],"affiliations":[{"raw_affiliation_string":"Genomics Department, BioReliance Corporation, 14920 Broschart Rd, Rockville, MD 20850, USA","institution_ids":["https://openalex.org/I4210100256"]},{"raw_affiliation_string":"J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850 and 2Genomics Department, BioReliance Corporation, 14920 Broschart Rd, Rockville, MD 20850, USA","institution_ids":["https://openalex.org/I1301553790"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5047815294","display_name":"Timothy B. Stockwell","orcid":"https://orcid.org/0000-0002-3595-4539"},"institutions":[{"id":"https://openalex.org/I1301553790","display_name":"J. Craig Venter Institute","ror":"https://ror.org/049r1ts75","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1301553790"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Timothy B. Stockwell","raw_affiliation_strings":["J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850","J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850 and 2Genomics Department, BioReliance Corporation, 14920 Broschart Rd, Rockville, MD 20850, USA"],"affiliations":[{"raw_affiliation_string":"J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850","institution_ids":["https://openalex.org/I1301553790"]},{"raw_affiliation_string":"J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850 and 2Genomics Department, BioReliance Corporation, 14920 Broschart Rd, Rockville, MD 20850, USA","institution_ids":["https://openalex.org/I1301553790"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5119226548"],"corresponding_institution_ids":["https://openalex.org/I1301553790"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":0.9636,"has_fulltext":false,"cited_by_count":49,"citation_normalized_percentile":{"value":0.7408598,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"40","issue":"W1","first_page":"W186","last_page":"W192"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10976","display_name":"Viral gastroenteritis research and epidemiology","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10976","display_name":"Viral gastroenteritis research and epidemiology","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11495","display_name":"Animal Virus Infections Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1103","display_name":"Animal Science and Zoology"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11243","display_name":"Respiratory viral infections research","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.834007740020752},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.6511029601097107},{"id":"https://openalex.org/keywords/genbank","display_name":"GenBank","score":0.6380180716514587},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.6178159713745117},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5761351585388184},{"id":"https://openalex.org/keywords/sendai-virus","display_name":"Sendai virus","score":0.5737043023109436},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.5460314154624939},{"id":"https://openalex.org/keywords/virus","display_name":"Virus","score":0.5424758195877075},{"id":"https://openalex.org/keywords/alphavirus","display_name":"Alphavirus","score":0.48574763536453247},{"id":"https://openalex.org/keywords/zucchini-yellow-mosaic-virus","display_name":"Zucchini yellow mosaic virus","score":0.43420588970184326},{"id":"https://openalex.org/keywords/measles-virus","display_name":"Measles virus","score":0.4247044026851654},{"id":"https://openalex.org/keywords/stop-codon","display_name":"Stop codon","score":0.42099636793136597},{"id":"https://openalex.org/keywords/gene-prediction","display_name":"Gene prediction","score":0.4173424541950226},{"id":"https://openalex.org/keywords/plant-virus","display_name":"Plant virus","score":0.22255784273147583},{"id":"https://openalex.org/keywords/potyvirus","display_name":"Potyvirus","score":0.21862736344337463},{"id":"https://openalex.org/keywords/measles","display_name":"Measles","score":0.09242525696754456}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.834007740020752},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6511029601097107},{"id":"https://openalex.org/C79029880","wikidata":"https://www.wikidata.org/wiki/Q901755","display_name":"GenBank","level":3,"score":0.6380180716514587},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.6178159713745117},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5761351585388184},{"id":"https://openalex.org/C2780127873","wikidata":"https://www.wikidata.org/wiki/Q1055751","display_name":"Sendai virus","level":3,"score":0.5737043023109436},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5460314154624939},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.5424758195877075},{"id":"https://openalex.org/C2777474056","wikidata":"https://www.wikidata.org/wiki/Q1111605","display_name":"Alphavirus","level":3,"score":0.48574763536453247},{"id":"https://openalex.org/C2779278959","wikidata":"https://www.wikidata.org/wiki/Q8074975","display_name":"Zucchini yellow mosaic virus","level":5,"score":0.43420588970184326},{"id":"https://openalex.org/C2778199166","wikidata":"https://www.wikidata.org/wiki/Q573943","display_name":"Measles virus","level":4,"score":0.4247044026851654},{"id":"https://openalex.org/C20580545","wikidata":"https://www.wikidata.org/wiki/Q28354","display_name":"Stop codon","level":3,"score":0.42099636793136597},{"id":"https://openalex.org/C105565629","wikidata":"https://www.wikidata.org/wiki/Q1248292","display_name":"Gene prediction","level":4,"score":0.4173424541950226},{"id":"https://openalex.org/C109110057","wikidata":"https://www.wikidata.org/wiki/Q1495434","display_name":"Plant virus","level":3,"score":0.22255784273147583},{"id":"https://openalex.org/C2776625791","wikidata":"https://www.wikidata.org/wiki/Q3400142","display_name":"Potyvirus","level":4,"score":0.21862736344337463},{"id":"https://openalex.org/C2776438120","wikidata":"https://www.wikidata.org/wiki/Q79793","display_name":"Measles","level":3,"score":0.09242525696754456},{"id":"https://openalex.org/C22070199","wikidata":"https://www.wikidata.org/wiki/Q192995","display_name":"Vaccination","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D005814","descriptor_name":"Genes, Viral","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005814","descriptor_name":"Genes, Viral","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005814","descriptor_name":"Genes, Viral","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012328","descriptor_name":"RNA Viruses","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012328","descriptor_name":"RNA Viruses","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012328","descriptor_name":"RNA Viruses","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014764","descriptor_name":"Viral Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014764","descriptor_name":"Viral Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014764","descriptor_name":"Viral Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016679","descriptor_name":"Genome, Viral","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016679","descriptor_name":"Genome, Viral","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016679","descriptor_name":"Genome, Viral","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017393","descriptor_name":"RNA Editing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017393","descriptor_name":"RNA Editing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017393","descriptor_name":"RNA Editing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018388","descriptor_name":"Codon, Terminator","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018388","descriptor_name":"Codon, Terminator","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018388","descriptor_name":"Codon, Terminator","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1093/nar/gks528","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gks528","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:22669909","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22669909","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.779.3514","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.779.3514","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/fa/4c/gks528.PMC3394299.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.941.2577","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.941.2577","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/40/W1/W186.full.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.951.9338","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.951.9338","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/early/2012/06/03/nar.gks528.full.pdf","raw_type":"text"},{"id":"pmh:oai:europepmc.org:2409774","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3394299","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:open-archive.highwire.org:nar:40/W1/W186","is_oa":false,"landing_page_url":"http://nar.oxfordjournals.org/cgi/content/short/40/W1/W186","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"}],"best_oa_location":{"id":"doi:10.1093/nar/gks528","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gks528","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4099999964237213,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":34,"referenced_works":["https://openalex.org/W1462157223","https://openalex.org/W1515948420","https://openalex.org/W1524435320","https://openalex.org/W1559861258","https://openalex.org/W1596639944","https://openalex.org/W1598875902","https://openalex.org/W1848031128","https://openalex.org/W1855484651","https://openalex.org/W1883652101","https://openalex.org/W1895593799","https://openalex.org/W1977675767","https://openalex.org/W2011095598","https://openalex.org/W2011413812","https://openalex.org/W2020125611","https://openalex.org/W2026190929","https://openalex.org/W2035942710","https://openalex.org/W2037216759","https://openalex.org/W2041592379","https://openalex.org/W2044624104","https://openalex.org/W2047581498","https://openalex.org/W2049077506","https://openalex.org/W2081324001","https://openalex.org/W2095655760","https://openalex.org/W2100325674","https://openalex.org/W2109581133","https://openalex.org/W2132214245","https://openalex.org/W2134884409","https://openalex.org/W2151038326","https://openalex.org/W2155172429","https://openalex.org/W2159482780","https://openalex.org/W2163723383","https://openalex.org/W2322490894","https://openalex.org/W4211221339","https://openalex.org/W4232596502"],"related_works":["https://openalex.org/W2381180037","https://openalex.org/W1943478869","https://openalex.org/W1568417978","https://openalex.org/W2194806344","https://openalex.org/W1952472043","https://openalex.org/W2388020656","https://openalex.org/W2401836156","https://openalex.org/W1451949470","https://openalex.org/W2315423498","https://openalex.org/W2398363434"],"abstract_inverted_index":{"A":[0],"gene":[1,23,61,84,96,101,165,191],"prediction":[2,85],"program,":[3],"VIGOR":[4,41,78,111,122,160],"(Viral":[5],"Genome":[6,35],"ORF":[7],"Reader),":[8],"was":[9],"developed":[10],"at":[11,33],"J.":[12],"Craig":[13],"Venter":[14],"Institute":[15],"in":[16,25,119],"2010":[17],"and":[18,29,56,59,65,75,94,142,157,173],"has":[19,123],"been":[20,124,197],"successfully":[21],"performing":[22],"calling":[24],"coronavirus,":[26],"influenza,":[27],"rhinovirus":[28],"rotavirus":[30],"for":[31,38,129,181,193],"projects":[32],"the":[34,163,178],"Sequencing":[36],"Center":[37],"Infectious":[39],"Diseases.":[40],"uses":[42],"sequence":[43,73],"similarity":[44,74],"search":[45],"against":[46],"custom":[47],"protein":[48,52],"databases":[49],"to":[50,107,126,203],"identify":[51],"coding":[53],"regions,":[54],"start":[55],"stop":[57,170],"codons":[58],"other":[60,66],"features.":[62],"Ribonucleicacid":[63],"editing":[64],"features":[67,166],"are":[68],"accurately":[69,161],"identified":[70],"based":[71],"on":[72],"signature":[76],"residues.":[77],"produces":[79],"four":[80],"output":[81],"files:":[82],"a":[83,87,95,113,185],"file,":[86,90,93],"complementary":[88],"DNA":[89],"an":[91],"alignment":[92],"feature":[97,102,187],"table":[98,103],"file.":[99],"The":[100,190],"can":[104],"be":[105],"used":[106],"create":[108],"GenBank":[109],"submission.":[110],"takes":[112],"single":[114],"input:":[115],"viral":[116],"genomic":[117],"sequences":[118],"FASTA":[120],"format.":[121],"extended":[125],"predict":[127],"genes":[128],"12":[130],"viruses:":[131],"measles":[132],"virus,":[133,135,137,140,146,151,154],"mumps":[134],"rubella":[136],"respiratory":[138],"syncytial":[139],"alphavirus":[141],"Venezuelan":[143],"equine":[144],"encephalitis":[145,153],"norovirus,":[147],"metapneumovirus,":[148],"yellow":[149],"fever":[150],"Japanese":[152],"parainfluenza":[155],"virus":[156],"Sendai":[158],"virus.":[159],"detects":[162],"complex":[164],"like":[167],"ribonucleicacid":[168],"editing,":[169],"codon":[171],"leakage":[172],"ribosomal":[174],"shunting.":[175],"Precisely":[176],"identifying":[177],"mat_peptide":[179],"cleavage":[180],"some":[182],"viruses":[183,195],"is":[184],"built-in":[186],"of":[188],"VIGOR.":[189],"predictions":[192],"these":[194],"have":[196],"evaluated":[198],"by":[199],"testing":[200],"from":[201,206],"27":[202],"240":[204],"genomes":[205],"GenBank.":[207]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":7},{"year":2018,"cited_by_count":9},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":1}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
