{"id":"https://openalex.org/W2081113032","doi":"https://doi.org/10.1093/nar/gks494","title":"DIANA miRPath v.2.0: investigating the combinatorial effect of microRNAs in pathways","display_name":"DIANA miRPath v.2.0: investigating the combinatorial effect of microRNAs in pathways","publication_year":2012,"publication_date":"2012-05-30","ids":{"openalex":"https://openalex.org/W2081113032","doi":"https://doi.org/10.1093/nar/gks494","mag":"2081113032","pmid":"https://pubmed.ncbi.nlm.nih.gov/22649059"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gks494","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gks494","pdf_url":"https://academic.oup.com/nar/article-pdf/40/W1/W498/18784216/gks494.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/40/W1/W498/18784216/gks494.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5042613823","display_name":"Ioannis S. Vlachos","orcid":"https://orcid.org/0000-0002-8849-808X"},"institutions":[{"id":"https://openalex.org/I6820528","display_name":"Alexander Fleming Biomedical Sciences Research Center","ror":"https://ror.org/013x0ky90","country_code":"GR","type":"facility","lineage":["https://openalex.org/I6820528"]}],"countries":["GR"],"is_corresponding":true,"raw_author_name":"Ioannis S. Vlachos","raw_affiliation_strings":["DIANA-Lab, Institute of Molecular Oncology, Biomedical Sciences Research Center 'Alexander Fleming', 16672 Vari, Greece"],"affiliations":[{"raw_affiliation_string":"DIANA-Lab, Institute of Molecular Oncology, Biomedical Sciences Research Center 'Alexander Fleming', 16672 Vari, Greece","institution_ids":["https://openalex.org/I6820528"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015897838","display_name":"Nikos Kostoulas","orcid":null},"institutions":[{"id":"https://openalex.org/I4210156054","display_name":"Athena Research and Innovation Center In Information Communication & Knowledge Technologies","ror":"https://ror.org/0576by029","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210156054"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Nikos Kostoulas","raw_affiliation_strings":["IMIS Institute, 'Athena' Research Center, 11524 Athens,"],"affiliations":[{"raw_affiliation_string":"IMIS Institute, 'Athena' Research Center, 11524 Athens,","institution_ids":["https://openalex.org/I4210156054"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066709451","display_name":"Thanasis Vergoulis","orcid":"https://orcid.org/0000-0003-0555-4128"},"institutions":[{"id":"https://openalex.org/I174458059","display_name":"National Technical University of Athens","ror":"https://ror.org/03cx6bg69","country_code":"GR","type":"education","lineage":["https://openalex.org/I174458059"]},{"id":"https://openalex.org/I4210099854","display_name":"Synapse (Greece)","ror":"https://ror.org/01vx59p26","country_code":"GR","type":"company","lineage":["https://openalex.org/I4210099854"]},{"id":"https://openalex.org/I4210156054","display_name":"Athena Research and Innovation Center In Information Communication & Knowledge Technologies","ror":"https://ror.org/0576by029","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210156054"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Thanasis Vergoulis","raw_affiliation_strings":["Synaptic Ltd., 71110 Heraklion, Greece,","Knowledge and Database Systems Lab, Department of Computer Science, School of Electrical and Computer Engineering, National Technical University of Athens, 15773 Zografou, 6","IMIS Institute, 'Athena' Research Center, 11524 Athens,"],"affiliations":[{"raw_affiliation_string":"Synaptic Ltd., 71110 Heraklion, Greece,","institution_ids":["https://openalex.org/I4210099854"]},{"raw_affiliation_string":"Knowledge and Database Systems Lab, Department of Computer Science, School of Electrical and Computer Engineering, National Technical University of Athens, 15773 Zografou, 6","institution_ids":["https://openalex.org/I174458059"]},{"raw_affiliation_string":"IMIS Institute, 'Athena' Research Center, 11524 Athens,","institution_ids":["https://openalex.org/I4210156054"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034585627","display_name":"\u0393\u03b5\u03ce\u03c1\u03b3\u03b9\u03bf\u03c2 \u0393\u03b5\u03c9\u03c1\u03b3\u03b1\u03ba\u03af\u03bb\u03b1\u03c2","orcid":"https://orcid.org/0000-0003-1160-5753"},"institutions":[{"id":"https://openalex.org/I200777214","display_name":"National and Kapodistrian University of Athens","ror":"https://ror.org/04gnjpq42","country_code":"GR","type":"education","lineage":["https://openalex.org/I200777214"]},{"id":"https://openalex.org/I4210150208","display_name":"Molecular Oncology (United States)","ror":"https://ror.org/04rtkc841","country_code":"US","type":"company","lineage":["https://openalex.org/I4210150208"]},{"id":"https://openalex.org/I6820528","display_name":"Alexander Fleming Biomedical Sciences Research Center","ror":"https://ror.org/013x0ky90","country_code":"GR","type":"facility","lineage":["https://openalex.org/I6820528"]}],"countries":["GR","US"],"is_corresponding":false,"raw_author_name":"Georgios Georgakilas","raw_affiliation_strings":["DIANA-Lab, Institute of Molecular Oncology, Biomedical Sciences Research Center 'Alexander Fleming', 16672 Vari,","Department of Informatics and Telecommunications, Postgraduate Program in 'Information Technologies in Medicine and Biology', University of Athens, 15784 Athens,"],"affiliations":[{"raw_affiliation_string":"DIANA-Lab, Institute of Molecular Oncology, Biomedical Sciences Research Center 'Alexander Fleming', 16672 Vari,","institution_ids":["https://openalex.org/I6820528","https://openalex.org/I4210150208"]},{"raw_affiliation_string":"Department of Informatics and Telecommunications, Postgraduate Program in 'Information Technologies in Medicine and Biology', University of Athens, 15784 Athens,","institution_ids":["https://openalex.org/I200777214"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004335778","display_name":"Martin Reczko","orcid":"https://orcid.org/0000-0002-0005-8718"},"institutions":[{"id":"https://openalex.org/I4210150208","display_name":"Molecular Oncology (United States)","ror":"https://ror.org/04rtkc841","country_code":"US","type":"company","lineage":["https://openalex.org/I4210150208"]},{"id":"https://openalex.org/I6820528","display_name":"Alexander Fleming Biomedical Sciences Research Center","ror":"https://ror.org/013x0ky90","country_code":"GR","type":"facility","lineage":["https://openalex.org/I6820528"]}],"countries":["GR","US"],"is_corresponding":false,"raw_author_name":"Martin Reczko","raw_affiliation_strings":["DIANA-Lab, Institute of Molecular Oncology, Biomedical Sciences Research Center 'Alexander Fleming', 16672 Vari,"],"affiliations":[{"raw_affiliation_string":"DIANA-Lab, Institute of Molecular Oncology, Biomedical Sciences Research Center 'Alexander Fleming', 16672 Vari,","institution_ids":["https://openalex.org/I6820528","https://openalex.org/I4210150208"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011455160","display_name":"Manolis Maragkakis","orcid":"https://orcid.org/0000-0002-3158-1763"},"institutions":[{"id":"https://openalex.org/I4210150208","display_name":"Molecular Oncology (United States)","ror":"https://ror.org/04rtkc841","country_code":"US","type":"company","lineage":["https://openalex.org/I4210150208"]},{"id":"https://openalex.org/I6820528","display_name":"Alexander Fleming Biomedical Sciences Research Center","ror":"https://ror.org/013x0ky90","country_code":"GR","type":"facility","lineage":["https://openalex.org/I6820528"]},{"id":"https://openalex.org/I79576946","display_name":"University of Pennsylvania","ror":"https://ror.org/00b30xv10","country_code":"US","type":"education","lineage":["https://openalex.org/I79576946"]}],"countries":["GR","US"],"is_corresponding":false,"raw_author_name":"Manolis Maragkakis","raw_affiliation_strings":["Division of Neuropathology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA and","DIANA-Lab, Institute of Molecular Oncology, Biomedical Sciences Research Center 'Alexander Fleming', 16672 Vari,","Department of Pathology and Laboratory Medicine,"],"affiliations":[{"raw_affiliation_string":"Division of Neuropathology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA and","institution_ids":["https://openalex.org/I79576946"]},{"raw_affiliation_string":"DIANA-Lab, Institute of Molecular Oncology, Biomedical Sciences Research Center 'Alexander Fleming', 16672 Vari,","institution_ids":["https://openalex.org/I6820528","https://openalex.org/I4210150208"]},{"raw_affiliation_string":"Department of Pathology and Laboratory Medicine,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103138297","display_name":"Maria D. Paraskevopoulou","orcid":"https://orcid.org/0000-0001-8527-5537"},"institutions":[{"id":"https://openalex.org/I200777214","display_name":"National and Kapodistrian University of Athens","ror":"https://ror.org/04gnjpq42","country_code":"GR","type":"education","lineage":["https://openalex.org/I200777214"]},{"id":"https://openalex.org/I4210150208","display_name":"Molecular Oncology (United States)","ror":"https://ror.org/04rtkc841","country_code":"US","type":"company","lineage":["https://openalex.org/I4210150208"]},{"id":"https://openalex.org/I6820528","display_name":"Alexander Fleming Biomedical Sciences Research Center","ror":"https://ror.org/013x0ky90","country_code":"GR","type":"facility","lineage":["https://openalex.org/I6820528"]}],"countries":["GR","US"],"is_corresponding":false,"raw_author_name":"Maria D. Paraskevopoulou","raw_affiliation_strings":["DIANA-Lab, Institute of Molecular Oncology, Biomedical Sciences Research Center 'Alexander Fleming', 16672 Vari,","Department of Informatics and Telecommunications, Postgraduate Program in 'Information Technologies in Medicine and Biology', University of Athens, 15784 Athens,"],"affiliations":[{"raw_affiliation_string":"DIANA-Lab, Institute of Molecular Oncology, Biomedical Sciences Research Center 'Alexander Fleming', 16672 Vari,","institution_ids":["https://openalex.org/I6820528","https://openalex.org/I4210150208"]},{"raw_affiliation_string":"Department of Informatics and Telecommunications, Postgraduate Program in 'Information Technologies in Medicine and Biology', University of Athens, 15784 Athens,","institution_ids":["https://openalex.org/I200777214"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016741076","display_name":"Kostantinos Prionidis","orcid":null},"institutions":[{"id":"https://openalex.org/I145722265","display_name":"University of Thessaly","ror":"https://ror.org/04v4g9h31","country_code":"GR","type":"education","lineage":["https://openalex.org/I145722265"]},{"id":"https://openalex.org/I4210150208","display_name":"Molecular Oncology (United States)","ror":"https://ror.org/04rtkc841","country_code":"US","type":"company","lineage":["https://openalex.org/I4210150208"]},{"id":"https://openalex.org/I6820528","display_name":"Alexander Fleming Biomedical Sciences Research Center","ror":"https://ror.org/013x0ky90","country_code":"GR","type":"facility","lineage":["https://openalex.org/I6820528"]}],"countries":["GR","US"],"is_corresponding":false,"raw_author_name":"Kostantinos Prionidis","raw_affiliation_strings":["DIANA-Lab, Institute of Molecular Oncology, Biomedical Sciences Research Center 'Alexander Fleming', 16672 Vari,","Department of Computer and Communication Engineering, University of Thessaly, 38221, Volos, Greece"],"affiliations":[{"raw_affiliation_string":"DIANA-Lab, Institute of Molecular Oncology, Biomedical Sciences Research Center 'Alexander Fleming', 16672 Vari,","institution_ids":["https://openalex.org/I6820528","https://openalex.org/I4210150208"]},{"raw_affiliation_string":"Department of Computer and Communication Engineering, University of Thessaly, 38221, Volos, Greece","institution_ids":["https://openalex.org/I145722265"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042574890","display_name":"Theodore Dalamagas","orcid":"https://orcid.org/0000-0002-5002-7901"},"institutions":[{"id":"https://openalex.org/I174458059","display_name":"National Technical University of Athens","ror":"https://ror.org/03cx6bg69","country_code":"GR","type":"education","lineage":["https://openalex.org/I174458059"]},{"id":"https://openalex.org/I4210099854","display_name":"Synapse (Greece)","ror":"https://ror.org/01vx59p26","country_code":"GR","type":"company","lineage":["https://openalex.org/I4210099854"]},{"id":"https://openalex.org/I4210156054","display_name":"Athena Research and Innovation Center In Information Communication & Knowledge Technologies","ror":"https://ror.org/0576by029","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210156054"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Theodore Dalamagas","raw_affiliation_strings":["Knowledge and Database Systems Lab, Department of Computer Science, School of Electrical and Computer Engineering, National Technical University of Athens, 15773 Zografou, 6","Synaptic Ltd., 71110 Heraklion, Greece,","IMIS Institute, 'Athena' Research Center, 11524 Athens,"],"affiliations":[{"raw_affiliation_string":"Knowledge and Database Systems Lab, Department of Computer Science, School of Electrical and Computer Engineering, National Technical University of Athens, 15773 Zografou, 6","institution_ids":["https://openalex.org/I174458059"]},{"raw_affiliation_string":"Synaptic Ltd., 71110 Heraklion, Greece,","institution_ids":["https://openalex.org/I4210099854"]},{"raw_affiliation_string":"IMIS Institute, 'Athena' Research Center, 11524 Athens,","institution_ids":["https://openalex.org/I4210156054"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5084654971","display_name":"Artemis G. Hatzigeorgiou","orcid":"https://orcid.org/0000-0003-1414-5668"},"institutions":[{"id":"https://openalex.org/I4210150208","display_name":"Molecular Oncology (United States)","ror":"https://ror.org/04rtkc841","country_code":"US","type":"company","lineage":["https://openalex.org/I4210150208"]},{"id":"https://openalex.org/I6820528","display_name":"Alexander Fleming Biomedical Sciences Research Center","ror":"https://ror.org/013x0ky90","country_code":"GR","type":"facility","lineage":["https://openalex.org/I6820528"]}],"countries":["GR","US"],"is_corresponding":false,"raw_author_name":"Artemis G. Hatzigeorgiou","raw_affiliation_strings":["DIANA-Lab, Institute of Molecular Oncology, Biomedical Sciences Research Center 'Alexander Fleming', 16672 Vari,"],"affiliations":[{"raw_affiliation_string":"DIANA-Lab, Institute of Molecular Oncology, Biomedical Sciences Research Center 'Alexander Fleming', 16672 Vari,","institution_ids":["https://openalex.org/I6820528","https://openalex.org/I4210150208"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5042613823"],"corresponding_institution_ids":["https://openalex.org/I6820528"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":20.8057,"has_fulltext":true,"cited_by_count":534,"citation_normalized_percentile":{"value":0.99673927,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":"40","issue":"W1","first_page":"W498","last_page":"W504"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11765","display_name":"Circular RNAs in diseases","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7296136617660522},{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.7118182182312012},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.642788827419281},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.5420435667037964},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.5105739831924438},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.45982101559638977},{"id":"https://openalex.org/keywords/hierarchical-clustering","display_name":"Hierarchical clustering","score":0.4166976809501648},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.4040772616863251},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.35422080755233765},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2676851749420166},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.23603180050849915},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.18946310877799988},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.15184691548347473},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.11285331845283508}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7296136617660522},{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.7118182182312012},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.642788827419281},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.5420435667037964},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.5105739831924438},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.45982101559638977},{"id":"https://openalex.org/C92835128","wikidata":"https://www.wikidata.org/wiki/Q1277447","display_name":"Hierarchical clustering","level":3,"score":0.4166976809501648},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.4040772616863251},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.35422080755233765},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2676851749420166},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.23603180050849915},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.18946310877799988},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.15184691548347473},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.11285331845283508},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C58226133","wikidata":"https://www.wikidata.org/wiki/Q1324199","display_name":"Pulmonary surfactant","level":2,"score":0.0},{"id":"https://openalex.org/C55352822","wikidata":"https://www.wikidata.org/wiki/Q5558978","display_name":"Gibbs isotherm","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1093/nar/gks494","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gks494","pdf_url":"https://academic.oup.com/nar/article-pdf/40/W1/W498/18784216/gks494.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:22649059","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22649059","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:3394305","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3394305","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.769.9085","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.769.9085","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/42/e5/gks494.PMC3394305.pdf","raw_type":"text"},{"id":"pmh:oai:dspace.lib.ntua.gr:123456789/29694","is_oa":true,"landing_page_url":"http://doi.org/10.1093/nar/gks494","pdf_url":null,"source":{"id":"https://openalex.org/S4377196837","display_name":"DSpace - NTUA (National Technical University of Athens)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I174458059","host_organization_name":"National Technical University of Athens","host_organization_lineage":["https://openalex.org/I174458059"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Research","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:ir.lib.uth.gr:11615/34514","is_oa":false,"landing_page_url":"http://hdl.handle.net/11615/34514","pdf_url":null,"source":{"id":"https://openalex.org/S4306400243","display_name":"University of Thessaly Institutional Repository (University of Thessaly)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I145722265","host_organization_name":"University of Thessaly","host_organization_lineage":["https://openalex.org/I145722265"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Research","raw_type":"journalArticle"},{"id":"pmh:oai:open-archive.highwire.org:nar:40/W1/W498","is_oa":false,"landing_page_url":"http://nar.oxfordjournals.org/cgi/content/short/40/W1/W498","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"}],"best_oa_location":{"id":"doi:10.1093/nar/gks494","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gks494","pdf_url":"https://academic.oup.com/nar/article-pdf/40/W1/W498/18784216/gks494.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320321917","display_name":"General Secretariat for Research and Technology","ror":"https://ror.org/04yeh8h63"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2081113032.pdf","grobid_xml":"https://content.openalex.org/works/W2081113032.grobid-xml"},"referenced_works_count":31,"referenced_works":["https://openalex.org/W14272306","https://openalex.org/W1969955808","https://openalex.org/W1995082021","https://openalex.org/W1997921822","https://openalex.org/W1998767819","https://openalex.org/W2000805034","https://openalex.org/W2004682594","https://openalex.org/W2010207650","https://openalex.org/W2010461414","https://openalex.org/W2011593178","https://openalex.org/W2017426710","https://openalex.org/W2037130549","https://openalex.org/W2042898046","https://openalex.org/W2059787381","https://openalex.org/W2064495831","https://openalex.org/W2065566217","https://openalex.org/W2067375208","https://openalex.org/W2096525273","https://openalex.org/W2098170672","https://openalex.org/W2102992354","https://openalex.org/W2110065044","https://openalex.org/W2112370482","https://openalex.org/W2113445340","https://openalex.org/W2126807293","https://openalex.org/W2127938920","https://openalex.org/W2152274187","https://openalex.org/W2162674813","https://openalex.org/W2167919777","https://openalex.org/W2168173728","https://openalex.org/W2171444347","https://openalex.org/W4244606935"],"related_works":["https://openalex.org/W2737319532","https://openalex.org/W3151405604","https://openalex.org/W2050308539","https://openalex.org/W2565797512","https://openalex.org/W2793648706","https://openalex.org/W2019096591","https://openalex.org/W3032012916","https://openalex.org/W1488286018","https://openalex.org/W3043187607","https://openalex.org/W3200375535"],"abstract_inverted_index":{"MicroRNAs":[0],"(miRNAs)":[1],"are":[2],"key":[3],"regulators":[4],"of":[5,24,35,71,171],"diverse":[6],"biological":[7],"processes":[8],"and":[9,65,73,98,130,148,183],"their":[10,77],"functional":[11],"analysis":[12,161,178],"has":[13],"been":[14],"deemed":[15],"central":[16],"in":[17,118,135],"many":[18],"research":[19],"pipelines.":[20,162],"The":[21,33],"new":[22],"version":[23],"DIANA-miRPath":[25,40,107,143],"web":[26,102,181],"server":[27,108],"was":[28],"redesigned":[29],"from":[30,58,95],"the":[31,128,166],"ground-up.":[32],"user":[34],"DNA":[36],"Intelligent":[37],"Analysis":[38],"(DIANA)":[39],"v2.0":[41,144],"can":[42,155,184],"now":[43],"utilize":[44],"miRNA":[45,90,119,133],"targets":[46,57,134],"predicted":[47,129],"with":[48,63],"high":[49],"accuracy":[50],"based":[51,75],"on":[52,76],"DIANA-microT-CDS":[53],"and/or":[54],"experimentally":[55,131],"verified":[56],"TarBase":[59],"v6;":[60],"combine":[61],"results":[62],"merging":[64],"meta-analysis":[66],"algorithms;":[67],"perform":[68],"hierarchical":[69],"clustering":[70],"miRNAs":[72],"pathways":[74],"interaction":[78],"levels;":[79],"as":[80,82,87],"well":[81],"elaborate":[83],"sophisticated":[84],"visualizations,":[85],"such":[86],"dendrograms":[88],"or":[89,124],"versus":[91],"pathway":[92,139,177],"heat":[93],"maps,":[94],"an":[96,146],"intuitive":[97],"easy":[99,150],"to":[100,109,125,151],"use":[101,152],"interface.":[103],"New":[104],"modules":[105],"enable":[106],"provide":[110],"information":[111],"regarding":[112],"pathogenic":[113],"single":[114],"nucleotide":[115],"polymorphisms":[116],"(SNPs)":[117],"target":[120],"sites":[121],"(SNPs":[122],"module)":[123],"annotate":[126],"all":[127],"validated":[132],"a":[136,169,180],"selected":[137],"molecular":[138],"(Reverse":[140],"Search":[141],"module).":[142],"is":[145],"efficient":[147],"yet":[149],"tool":[153],"that":[154],"be":[156,185],"incorporated":[157],"successfully":[158],"into":[159],"miRNA-related":[160],"It":[163],"provides":[164],"for":[165,175],"first":[167],"time":[168],"series":[170],"highly":[172],"specific":[173],"tools":[174],"miRNA-targeted":[176],"via":[179],"interface":[182],"accessed":[186],"at":[187],"http://www.microrna.gr/miRPathv2.":[188]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":9},{"year":2024,"cited_by_count":14},{"year":2023,"cited_by_count":13},{"year":2022,"cited_by_count":32},{"year":2021,"cited_by_count":46},{"year":2020,"cited_by_count":28},{"year":2019,"cited_by_count":24},{"year":2018,"cited_by_count":29},{"year":2017,"cited_by_count":55},{"year":2016,"cited_by_count":99},{"year":2015,"cited_by_count":93},{"year":2014,"cited_by_count":57},{"year":2013,"cited_by_count":30},{"year":2012,"cited_by_count":3}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
