{"id":"https://openalex.org/W2134561555","doi":"https://doi.org/10.1093/nar/gks1186","title":"SpermatogenesisOnline 1.0: a resource for spermatogenesis based on manual literature curation and genome-wide data mining","display_name":"SpermatogenesisOnline 1.0: a resource for spermatogenesis based on manual literature curation and genome-wide data mining","publication_year":2012,"publication_date":"2012-11-27","ids":{"openalex":"https://openalex.org/W2134561555","doi":"https://doi.org/10.1093/nar/gks1186","mag":"2134561555","pmid":"https://pubmed.ncbi.nlm.nih.gov/23193286"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gks1186","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gks1186","pdf_url":"https://academic.oup.com/nar/article-pdf/41/D1/D1055/18788573/gks1186.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/41/D1/D1055/18788573/gks1186.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100719572","display_name":"Yuanwei Zhang","orcid":"https://orcid.org/0000-0002-2814-8061"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Yuanwei Zhang","raw_affiliation_strings":["Hefei National Laboratory for Physical Sciences at Microscale and Department of Life Sciences, University of Science and Technology of China, Hefei 230027, China"],"affiliations":[{"raw_affiliation_string":"Hefei National Laboratory for Physical Sciences at Microscale and Department of Life Sciences, University of Science and Technology of China, Hefei 230027, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072731575","display_name":"Liangwen Zhong","orcid":"https://orcid.org/0000-0002-5397-3880"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Liangwen Zhong","raw_affiliation_strings":["University of Science and Technology of China, Hefei, China"],"affiliations":[{"raw_affiliation_string":"University of Science and Technology of China, Hefei, China","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101552279","display_name":"Bo Xu","orcid":"https://orcid.org/0000-0002-8606-6603"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bo Xu","raw_affiliation_strings":["University of Science and Technology of China, Hefei, China"],"affiliations":[{"raw_affiliation_string":"University of Science and Technology of China, Hefei, China","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032964730","display_name":"Yifan Yang","orcid":"https://orcid.org/0000-0001-9127-168X"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yifan Yang","raw_affiliation_strings":["University of Science and Technology of China, Hefei, China"],"affiliations":[{"raw_affiliation_string":"University of Science and Technology of China, Hefei, China","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057896799","display_name":"Rongjun Ban","orcid":null},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Rongjun Ban","raw_affiliation_strings":["University of Science and Technology of China, Hefei, China"],"affiliations":[{"raw_affiliation_string":"University of Science and Technology of China, Hefei, China","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058745924","display_name":"Jun Zhu","orcid":"https://orcid.org/0000-0003-0834-8178"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jun Zhu","raw_affiliation_strings":["University of Science and Technology of China, Hefei, China"],"affiliations":[{"raw_affiliation_string":"University of Science and Technology of China, Hefei, China","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039369417","display_name":"Howard J. Cooke","orcid":"https://orcid.org/0000-0003-3309-7921"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Howard J. Cooke","raw_affiliation_strings":["University of Science and Technology of China, Hefei, China"],"affiliations":[{"raw_affiliation_string":"University of Science and Technology of China, Hefei, China","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075969991","display_name":"Qiaomei Hao","orcid":null},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"QiaoMei Hao","raw_affiliation_strings":["University of Science and Technology of China, Hefei, China"],"affiliations":[{"raw_affiliation_string":"University of Science and Technology of China, Hefei, China","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5005929167","display_name":"Qinghua Shi","orcid":"https://orcid.org/0000-0003-1180-9799"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qinghua Shi","raw_affiliation_strings":["University of Science and Technology of China, Hefei, China"],"affiliations":[{"raw_affiliation_string":"University of Science and Technology of China, Hefei, China","institution_ids":["https://openalex.org/I126520041"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5100719572"],"corresponding_institution_ids":[],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":2.3924,"has_fulltext":true,"cited_by_count":45,"citation_normalized_percentile":{"value":0.88317897,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"41","issue":"D1","first_page":"D1055","last_page":"D1062"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10116","display_name":"Sperm and Testicular Function","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/2743","display_name":"Reproductive Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10116","display_name":"Sperm and Testicular Function","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/2743","display_name":"Reproductive Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11077","display_name":"Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10364","display_name":"Reproductive Biology and Fertility","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8752681016921997},{"id":"https://openalex.org/keywords/spermatogenesis","display_name":"Spermatogenesis","score":0.7692580223083496},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.709091305732727},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.6116610765457153},{"id":"https://openalex.org/keywords/male-infertility","display_name":"Male infertility","score":0.5587913990020752},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.5399155616760254},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5111694931983948},{"id":"https://openalex.org/keywords/infertility","display_name":"Infertility","score":0.4639543890953064},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.393205463886261},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.32986611127853394},{"id":"https://openalex.org/keywords/endocrinology","display_name":"Endocrinology","score":0.07304474711418152},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.06753873825073242}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8752681016921997},{"id":"https://openalex.org/C123765429","wikidata":"https://www.wikidata.org/wiki/Q36961","display_name":"Spermatogenesis","level":2,"score":0.7692580223083496},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.709091305732727},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6116610765457153},{"id":"https://openalex.org/C2777338322","wikidata":"https://www.wikidata.org/wiki/Q280156","display_name":"Male infertility","level":4,"score":0.5587913990020752},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5399155616760254},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5111694931983948},{"id":"https://openalex.org/C2777688143","wikidata":"https://www.wikidata.org/wiki/Q179399","display_name":"Infertility","level":3,"score":0.4639543890953064},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.393205463886261},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.32986611127853394},{"id":"https://openalex.org/C134018914","wikidata":"https://www.wikidata.org/wiki/Q162606","display_name":"Endocrinology","level":1,"score":0.07304474711418152},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.06753873825073242},{"id":"https://openalex.org/C2779234561","wikidata":"https://www.wikidata.org/wiki/Q11995","display_name":"Pregnancy","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002417","descriptor_name":"Cattle","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002417","descriptor_name":"Cattle","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002417","descriptor_name":"Cattle","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013091","descriptor_name":"Spermatogenesis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D013091","descriptor_name":"Spermatogenesis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D013091","descriptor_name":"Spermatogenesis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1093/nar/gks1186","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gks1186","pdf_url":"https://academic.oup.com/nar/article-pdf/41/D1/D1055/18788573/gks1186.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:23193286","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23193286","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pure.ed.ac.uk:publications/93b813ae-ebac-43df-96de-4342fed178db","is_oa":true,"landing_page_url":null,"pdf_url":"http://hdl.handle.net/20.500.11820/93b813ae-ebac-43df-96de-4342fed178db","source":{"id":"https://openalex.org/S4406922455","display_name":"Edinburgh Research Explorer","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":""},{"id":"pmh:oai:pure.ed.ac.uk:publications/93b813ae-ebac-43df-96de-4342fed178db","is_oa":true,"landing_page_url":"https://www.research.ed.ac.uk/en/publications/93b813ae-ebac-43df-96de-4342fed178db","pdf_url":"http://hdl.handle.net/20.500.11820/93b813ae-ebac-43df-96de-4342fed178db","source":{"id":"https://openalex.org/S4306400321","display_name":"Edinburgh Research Explorer (University of Edinburgh)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I98677209","host_organization_name":"University of Edinburgh","host_organization_lineage":["https://openalex.org/I98677209"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Zhang, Y, Zhong, L, Xu, B, Yang, Y, Ban, R, Zhu, J, Cooke, H J, Hao, Q & Shi, Q 2013, 'SpermatogenesisOnline 1.0 : a resource for spermatogenesis based on manual literature curation and genome-wide data mining', Nucleic Acids Research, vol. 41, no. Database issue, pp. D1055-62. https://doi.org/10.1093/nar/gks1186","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:europepmc.org:2536491","is_oa":false,"landing_page_url":"http://europepmc.org/articles/PMC3531227","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3531227","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3531227","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gks1186","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gks1186","pdf_url":"https://academic.oup.com/nar/article-pdf/41/D1/D1055/18788573/gks1186.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2277426236","display_name":null,"funder_award_id":"2007CB947401","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"}],"funders":[{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2134561555.pdf","grobid_xml":"https://content.openalex.org/works/W2134561555.grobid-xml"},"referenced_works_count":39,"referenced_works":["https://openalex.org/W575657316","https://openalex.org/W1554979626","https://openalex.org/W1969127101","https://openalex.org/W1970291858","https://openalex.org/W1988823631","https://openalex.org/W2016789158","https://openalex.org/W2022531748","https://openalex.org/W2027215921","https://openalex.org/W2033042516","https://openalex.org/W2050263604","https://openalex.org/W2057545775","https://openalex.org/W2057641163","https://openalex.org/W2077316753","https://openalex.org/W2081676666","https://openalex.org/W2082202339","https://openalex.org/W2083873101","https://openalex.org/W2095867585","https://openalex.org/W2102287346","https://openalex.org/W2106124984","https://openalex.org/W2108366237","https://openalex.org/W2108671185","https://openalex.org/W2122863289","https://openalex.org/W2129516088","https://openalex.org/W2130732086","https://openalex.org/W2132035145","https://openalex.org/W2132582966","https://openalex.org/W2142678478","https://openalex.org/W2143092522","https://openalex.org/W2147898515","https://openalex.org/W2148821835","https://openalex.org/W2149608537","https://openalex.org/W2165253681","https://openalex.org/W2168436056","https://openalex.org/W2171988982","https://openalex.org/W2587143208","https://openalex.org/W2915108429","https://openalex.org/W4388073893","https://openalex.org/W4388158402","https://openalex.org/W6671016636"],"related_works":["https://openalex.org/W2801018659","https://openalex.org/W3005126946","https://openalex.org/W2787831202","https://openalex.org/W2078445138","https://openalex.org/W2349351288","https://openalex.org/W4402909363","https://openalex.org/W3141892806","https://openalex.org/W2971787736","https://openalex.org/W2956846071","https://openalex.org/W2022242064"],"abstract_inverted_index":{"Human":[0],"infertility":[1],"affects":[2],"10-15%":[3],"of":[4,7,21,103,165,177],"couples,":[5],"half":[6],"which":[8,115,173],"is":[9,17,30,61],"attributed":[10],"to":[11,32,92,119,187,195],"the":[12,25,34,101,136,169,175],"male":[13,22,45],"partner.":[14],"Abnormal":[15],"spermatogenesis":[16,29,60,95,122],"a":[18,67],"major":[19],"cause":[20],"infertility.":[23,46],"Characterizing":[24],"genes":[26,49,90,118,144,167],"involved":[27],"in":[28,41,53,94,96,121,131],"fundamental":[31],"understand":[33],"mechanisms":[35],"underlying":[36],"this":[37],"biological":[38,197],"process":[39],"and":[40,141,183],"developing":[42],"treatments":[43],"for":[44,59,88,155],"Although":[47],"many":[48],"have":[50,64],"been":[51],"implicated":[52],"spermatogenesis,":[54],"no":[55],"dedicated":[56],"bioinformatic":[57],"resource":[58],"available.":[62],"We":[63],"developed":[65,107],"such":[66],"database,":[68],"SpermatogenesisOnline":[69,189],"1.0":[70,190],"(http://mcg.ustc.edu.cn/sdap1/spermgenes/),":[71],"using":[72],"manual":[73],"curation":[74,182],"from":[75,135],"30":[76],"233":[77],"articles":[78],"published":[79],"before":[80],"1":[81],"May":[82],"2012.":[83],"It":[84],"provides":[85],"detailed":[86],"information":[87],"1666":[89],"reported":[91],"participate":[93,120],"37":[97],"organisms.":[98],"Based":[99],"on":[100,127],"analysis":[102,161],"these":[104],"genes,":[105],"we":[106],"an":[108],"algorithm,":[109],"Greed":[110],"AUC":[111],"Stepwise":[112],"(GAS)":[113],"model,":[114],"predicted":[116,140,166],"762":[117],"(GAS":[123],"probability":[124],">0.5)":[125],"based":[126],"genome-wide":[128],"transcriptional":[129],"data":[130,184],"Mus":[132],"musculus":[133],"testis":[134],"ArrayExpress":[137],"database.":[138],"These":[139],"experimentally":[142,170],"verified":[143,171],"were":[145],"annotated,":[146],"with":[147,168],"several":[148],"identical":[149],"spermatogenesis-related":[150],"GO":[151],"terms":[152],"being":[153],"enriched":[154],"both":[156],"classes.":[157],"Furthermore,":[158],"protein-protein":[159],"interaction":[160],"indicates":[162],"direct":[163],"interactions":[164],"ones,":[172],"supports":[174],"reliability":[176],"GAS.":[178],"The":[179],"strategy":[180],"(manual":[181],"mining)":[185],"used":[186],"develop":[188],"can":[191],"be":[192],"easily":[193],"extended":[194],"other":[196],"processes.":[198]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":6},{"year":2021,"cited_by_count":9},{"year":2020,"cited_by_count":7},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":2},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":3}],"updated_date":"2026-03-17T17:19:04.345684","created_date":"2025-10-10T00:00:00"}
