{"id":"https://openalex.org/W2146734921","doi":"https://doi.org/10.1093/nar/gks1172","title":"ENCODE Data in the UCSC Genome Browser: year 5 update","display_name":"ENCODE Data in the UCSC Genome Browser: year 5 update","publication_year":2012,"publication_date":"2012-11-26","ids":{"openalex":"https://openalex.org/W2146734921","doi":"https://doi.org/10.1093/nar/gks1172","mag":"2146734921","pmid":"https://pubmed.ncbi.nlm.nih.gov/23193274"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gks1172","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gks1172","pdf_url":"https://academic.oup.com/nar/article-pdf/41/D1/D56/3671170/gks1172.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/41/D1/D56/3671170/gks1172.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5044656439","display_name":"Kate R. Rosenbloom","orcid":"https://orcid.org/0000-0001-8799-4826"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Kate R. Rosenbloom","raw_affiliation_strings":["Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, USA. kate@soe.ucsc.edu","University of California, Santa Cruz, Santa Cruz, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, USA. kate@soe.ucsc.edu","institution_ids":["https://openalex.org/I185103710"]},{"raw_affiliation_string":"University of California, Santa Cruz, Santa Cruz, United States","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041151354","display_name":"Cricket A. Sloan","orcid":"https://orcid.org/0000-0002-0693-6999"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cricket A. Sloan","raw_affiliation_strings":["Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","University of California, Santa Cruz, Santa Cruz, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","institution_ids":["https://openalex.org/I185103710"]},{"raw_affiliation_string":"University of California, Santa Cruz, Santa Cruz, United States","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013449579","display_name":"Venkat S. Malladi","orcid":"https://orcid.org/0000-0002-0144-0564"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Venkat S. Malladi","raw_affiliation_strings":["Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","University of California, Santa Cruz, Santa Cruz, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","institution_ids":["https://openalex.org/I185103710"]},{"raw_affiliation_string":"University of California, Santa Cruz, Santa Cruz, United States","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101980603","display_name":"Timothy R. Dreszer","orcid":"https://orcid.org/0000-0002-7328-1283"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Timothy R. Dreszer","raw_affiliation_strings":["Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","University of California, Santa Cruz, Santa Cruz, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","institution_ids":["https://openalex.org/I185103710"]},{"raw_affiliation_string":"University of California, Santa Cruz, Santa Cruz, United States","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041383424","display_name":"Katrina Learned","orcid":"https://orcid.org/0000-0003-3112-7525"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Katrina Learned","raw_affiliation_strings":["Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","University of California, Santa Cruz, Santa Cruz, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","institution_ids":["https://openalex.org/I185103710"]},{"raw_affiliation_string":"University of California, Santa Cruz, Santa Cruz, United States","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087249560","display_name":"Vanessa M. Kirkup","orcid":null},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Vanessa M. Kirkup","raw_affiliation_strings":["Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","University of California, Santa Cruz, Santa Cruz, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","institution_ids":["https://openalex.org/I185103710"]},{"raw_affiliation_string":"University of California, Santa Cruz, Santa Cruz, United States","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021359962","display_name":"Matthew C. Wong","orcid":"https://orcid.org/0000-0002-6317-2526"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Matthew C. Wong","raw_affiliation_strings":["Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","University of California, Santa Cruz, Santa Cruz, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","institution_ids":["https://openalex.org/I185103710"]},{"raw_affiliation_string":"University of California, Santa Cruz, Santa Cruz, United States","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064385256","display_name":"Morgan Maddren","orcid":null},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Morgan Maddren","raw_affiliation_strings":["Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","University of California, Santa Cruz, Santa Cruz, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","institution_ids":["https://openalex.org/I185103710"]},{"raw_affiliation_string":"University of California, Santa Cruz, Santa Cruz, United States","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022121743","display_name":"Ruihua Fang","orcid":"https://orcid.org/0000-0001-5102-7156"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ruihua Fang","raw_affiliation_strings":["Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","University of California, Santa Cruz, Santa Cruz, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","institution_ids":["https://openalex.org/I185103710"]},{"raw_affiliation_string":"University of California, Santa Cruz, Santa Cruz, United States","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003938452","display_name":"Steven G. Heitner","orcid":null},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Steven G. Heitner","raw_affiliation_strings":["Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","University of California, Santa Cruz, Santa Cruz, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","institution_ids":["https://openalex.org/I185103710"]},{"raw_affiliation_string":"University of California, Santa Cruz, Santa Cruz, United States","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085049971","display_name":"Brian T. Lee","orcid":"https://orcid.org/0000-0001-6382-9738"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brian T. Lee","raw_affiliation_strings":["Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","University of California, Santa Cruz, Santa Cruz, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","institution_ids":["https://openalex.org/I185103710"]},{"raw_affiliation_string":"University of California, Santa Cruz, Santa Cruz, United States","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112697905","display_name":"Galt P Barber","orcid":null},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Galt P. Barber","raw_affiliation_strings":["Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","University of California, Santa Cruz, Santa Cruz, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","institution_ids":["https://openalex.org/I185103710"]},{"raw_affiliation_string":"University of California, Santa Cruz, Santa Cruz, United States","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085724154","display_name":"Rachel Harte","orcid":null},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Rachel A. Harte","raw_affiliation_strings":["Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","University of California, Santa Cruz, Santa Cruz, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","institution_ids":["https://openalex.org/I185103710"]},{"raw_affiliation_string":"University of California, Santa Cruz, Santa Cruz, United States","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054009720","display_name":"Mark Diekhans","orcid":"https://orcid.org/0000-0002-0430-0989"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mark Diekhans","raw_affiliation_strings":["Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","University of California, Santa Cruz, Santa Cruz, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","institution_ids":["https://openalex.org/I185103710"]},{"raw_affiliation_string":"University of California, Santa Cruz, Santa Cruz, United States","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004983694","display_name":"Jeffrey C. Long","orcid":"https://orcid.org/0000-0002-0435-1209"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jeffrey C. Long","raw_affiliation_strings":["Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","University of California, Santa Cruz, Santa Cruz, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","institution_ids":["https://openalex.org/I185103710"]},{"raw_affiliation_string":"University of California, Santa Cruz, Santa Cruz, United States","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033670082","display_name":"Steven P. Wilder","orcid":"https://orcid.org/0000-0001-8049-2559"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Steven P. Wilder","raw_affiliation_strings":["Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","University of California, Santa Cruz, Santa Cruz, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","institution_ids":["https://openalex.org/I185103710"]},{"raw_affiliation_string":"University of California, Santa Cruz, Santa Cruz, United States","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034427205","display_name":"Ann S. Zweig","orcid":null},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ann S. Zweig","raw_affiliation_strings":["Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","University of California, Santa Cruz, Santa Cruz, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","institution_ids":["https://openalex.org/I185103710"]},{"raw_affiliation_string":"University of California, Santa Cruz, Santa Cruz, United States","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076917634","display_name":"Donna Karolchik","orcid":null},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Donna Karolchik","raw_affiliation_strings":["Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","University of California, Santa Cruz, Santa Cruz, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","institution_ids":["https://openalex.org/I185103710"]},{"raw_affiliation_string":"University of California, Santa Cruz, Santa Cruz, United States","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072909873","display_name":"Robert M. Kuhn","orcid":"https://orcid.org/0000-0001-8103-7793"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Robert M. Kuhn","raw_affiliation_strings":["Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","University of California, Santa Cruz, Santa Cruz, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","institution_ids":["https://openalex.org/I185103710"]},{"raw_affiliation_string":"University of California, Santa Cruz, Santa Cruz, United States","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090849321","display_name":"David Haussler","orcid":"https://orcid.org/0000-0003-1533-4575"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David Haussler","raw_affiliation_strings":["Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","University of California, Santa Cruz, Santa Cruz, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","institution_ids":["https://openalex.org/I185103710"]},{"raw_affiliation_string":"University of California, Santa Cruz, Santa Cruz, United States","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5006195366","display_name":"W. James Kent","orcid":"https://orcid.org/0000-0002-2564-9303"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"W. James Kent","raw_affiliation_strings":["Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","University of California, Santa Cruz, Santa Cruz, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, 2 Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA, 3 Vertebrate Genomics Group, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK and 4 Howard Hughes Medical Institute, UCSC, Santa Cruz, CA 95064, USA","institution_ids":["https://openalex.org/I185103710"]},{"raw_affiliation_string":"University of California, Santa Cruz, Santa Cruz, United States","institution_ids":["https://openalex.org/I185103710"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5044656439"],"corresponding_institution_ids":["https://openalex.org/I185103710"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":31.6799,"has_fulltext":true,"cited_by_count":810,"citation_normalized_percentile":{"value":0.9987656,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"41","issue":"D1","first_page":"D56","last_page":"D63"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/encode","display_name":"ENCODE","score":0.9570431113243103},{"id":"https://openalex.org/keywords/genome-browser","display_name":"Genome browser","score":0.7589519619941711},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.7429258227348328},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7395508289337158},{"id":"https://openalex.org/keywords/encyclopedia","display_name":"Encyclopedia","score":0.6793160438537598},{"id":"https://openalex.org/keywords/repertoire","display_name":"Repertoire","score":0.5908485651016235},{"id":"https://openalex.org/keywords/human-genome","display_name":"Human genome","score":0.5538880228996277},{"id":"https://openalex.org/keywords/ensembl","display_name":"Ensembl","score":0.4698537588119507},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.422590970993042},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.4010911285877228},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.38932615518569946},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3428022861480713},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.22314122319221497},{"id":"https://openalex.org/keywords/library-science","display_name":"Library science","score":0.19725683331489563},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.19076481461524963}],"concepts":[{"id":"https://openalex.org/C66746571","wikidata":"https://www.wikidata.org/wiki/Q1134833","display_name":"ENCODE","level":3,"score":0.9570431113243103},{"id":"https://openalex.org/C2781148417","wikidata":"https://www.wikidata.org/wiki/Q5533486","display_name":"Genome browser","level":5,"score":0.7589519619941711},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.7429258227348328},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7395508289337158},{"id":"https://openalex.org/C148863701","wikidata":"https://www.wikidata.org/wiki/Q5292","display_name":"Encyclopedia","level":2,"score":0.6793160438537598},{"id":"https://openalex.org/C2778473898","wikidata":"https://www.wikidata.org/wiki/Q2145110","display_name":"Repertoire","level":2,"score":0.5908485651016235},{"id":"https://openalex.org/C197077220","wikidata":"https://www.wikidata.org/wiki/Q720988","display_name":"Human genome","level":4,"score":0.5538880228996277},{"id":"https://openalex.org/C141674004","wikidata":"https://www.wikidata.org/wiki/Q1344256","display_name":"Ensembl","level":5,"score":0.4698537588119507},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.422590970993042},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4010911285877228},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.38932615518569946},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3428022861480713},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.22314122319221497},{"id":"https://openalex.org/C161191863","wikidata":"https://www.wikidata.org/wiki/Q199655","display_name":"Library science","level":1,"score":0.19725683331489563},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.19076481461524963},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gks1172","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gks1172","pdf_url":"https://academic.oup.com/nar/article-pdf/41/D1/D56/3671170/gks1172.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:23193274","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23193274","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:europepmc.org:2590258","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3531152","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gks1172","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gks1172","pdf_url":"https://academic.oup.com/nar/article-pdf/41/D1/D56/3671170/gks1172.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","score":0.49000000953674316,"display_name":"Partnerships for the goals"}],"awards":[{"id":"https://openalex.org/G1243730289","display_name":"Ensembl","funder_award_id":"095908","funder_id":"https://openalex.org/F4320311904","funder_display_name":"Wellcome Trust"},{"id":"https://openalex.org/G1791008617","display_name":null,"funder_award_id":"3P41HG002371-12S1","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"},{"id":"https://openalex.org/G2340071951","display_name":null,"funder_award_id":"3U41HG004568-03S1","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"},{"id":"https://openalex.org/G5819775606","display_name":null,"funder_award_id":"5P41HG002371-12","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"},{"id":"https://openalex.org/G5913279171","display_name":null,"funder_award_id":"5U41HG004568-04","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"}],"funders":[{"id":"https://openalex.org/F4320306082","display_name":"Howard Hughes Medical Institute","ror":"https://ror.org/006w34k90"},{"id":"https://openalex.org/F4320311904","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08"},{"id":"https://openalex.org/F4320337348","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2146734921.pdf","grobid_xml":"https://content.openalex.org/works/W2146734921.grobid-xml"},"referenced_works_count":28,"referenced_works":["https://openalex.org/W1544691147","https://openalex.org/W1996212302","https://openalex.org/W2009935171","https://openalex.org/W2018363492","https://openalex.org/W2031057223","https://openalex.org/W2039176012","https://openalex.org/W2041993671","https://openalex.org/W2075016035","https://openalex.org/W2079671119","https://openalex.org/W2081942683","https://openalex.org/W2094678200","https://openalex.org/W2096465161","https://openalex.org/W2102904139","https://openalex.org/W2118608526","https://openalex.org/W2124514674","https://openalex.org/W2127143129","https://openalex.org/W2128016314","https://openalex.org/W2157750191","https://openalex.org/W2158272128","https://openalex.org/W2160379721","https://openalex.org/W2166810745","https://openalex.org/W2167827709","https://openalex.org/W2171808845","https://openalex.org/W2247766769","https://openalex.org/W2259938310","https://openalex.org/W3104066961","https://openalex.org/W4210347168","https://openalex.org/W4230875896"],"related_works":["https://openalex.org/W2158272128","https://openalex.org/W2139297998","https://openalex.org/W2462807523","https://openalex.org/W3109437984","https://openalex.org/W2274932919","https://openalex.org/W2804921183","https://openalex.org/W4387264054","https://openalex.org/W2160379721","https://openalex.org/W2152320398","https://openalex.org/W2009935171"],"abstract_inverted_index":{"The":[0,88,120],"Encyclopedia":[1],"of":[2,12,20,31,85,90,111],"DNA":[3],"Elements":[4],"(ENCODE),":[5],"http://encodeproject.org,":[6],"has":[7,49],"completed":[8],"its":[9,28],"fifth":[10],"year":[11,30],"scientific":[13],"collaboration":[14],"to":[15,79],"create":[16],"a":[17,59],"comprehensive":[18],"catalog":[19],"functional":[21],"elements":[22],"in":[23,33,41],"the":[24,34,38,44,64,77,83,86,99,129],"human":[25,46],"genome,":[26,66],"and":[27,107,113,126],"third":[29],"investigations":[32],"mouse":[35,65],"genome.":[36],"Since":[37],"last":[39],"report":[40],"this":[42,74,95],"journal,":[43],"ENCODE":[45,121,130],"data":[47,96,108,115,131],"repertoire":[48],"grown":[50],"by":[51,58],"898":[52],"new":[53,70],"experiments":[54,71],"(totaling":[55],"2886),":[56],"accompanied":[57],"major":[60],"integrative":[61],"analysis.":[62],"In":[63],"results":[67],"from":[68],"404":[69],"became":[72],"available":[73,97],"year,":[75],"increasing":[76],"total":[78],"583,":[80],"collected":[81],"during":[82],"course":[84],"project.":[87],"University":[89],"California,":[91],"Santa":[92],"Cruz,":[93],"makes":[94],"on":[98],"public":[100],"Genome":[101],"Browser":[102],"http://genome.ucsc.edu":[103],"for":[104],"visual":[105],"browsing":[106],"mining.":[109],"Download":[110],"raw":[112],"processed":[114],"files":[116],"are":[117],"all":[118],"supported.":[119],"portal":[122],"provides":[123],"specialized":[124],"tools":[125],"information":[127],"about":[128],"sets.":[132]},"counts_by_year":[{"year":2026,"cited_by_count":7},{"year":2025,"cited_by_count":19},{"year":2024,"cited_by_count":44},{"year":2023,"cited_by_count":39},{"year":2022,"cited_by_count":39},{"year":2021,"cited_by_count":53},{"year":2020,"cited_by_count":51},{"year":2019,"cited_by_count":49},{"year":2018,"cited_by_count":70},{"year":2017,"cited_by_count":88},{"year":2016,"cited_by_count":93},{"year":2015,"cited_by_count":106},{"year":2014,"cited_by_count":94},{"year":2013,"cited_by_count":57},{"year":2012,"cited_by_count":1}],"updated_date":"2026-07-30T17:31:21.811387","created_date":"2025-10-10T00:00:00"}
