{"id":"https://openalex.org/W2002375963","doi":"https://doi.org/10.1093/nar/gks1139","title":"Library of Apicomplexan Metabolic Pathways: a manually curated database for metabolic pathways of apicomplexan parasites","display_name":"Library of Apicomplexan Metabolic Pathways: a manually curated database for metabolic pathways of apicomplexan parasites","publication_year":2012,"publication_date":"2012-11-26","ids":{"openalex":"https://openalex.org/W2002375963","doi":"https://doi.org/10.1093/nar/gks1139","mag":"2002375963","pmid":"https://pubmed.ncbi.nlm.nih.gov/23193253"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gks1139","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gks1139","pdf_url":"https://academic.oup.com/nar/article-pdf/41/D1/D706/18788268/gks1139.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/41/D1/D706/18788268/gks1139.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5055066294","display_name":"Achchuthan Shanmugasundram","orcid":"https://orcid.org/0000-0003-2349-6929"},"institutions":[{"id":"https://openalex.org/I146655781","display_name":"University of Liverpool","ror":"https://ror.org/04xs57h96","country_code":"GB","type":"education","lineage":["https://openalex.org/I146655781"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Achchuthan Shanmugasundram","raw_affiliation_strings":["Department of Functional and Comparative Genomics, Institute of Integrative Biology, University of Liverpool, Biosciences Building, Crown Street, Liverpool L69 7ZB, UK. ashanmu@liv.ac.uk","Department of Functional and Comparative Genomics, Institute of Integrative Biology, University of Liverpool, Biosciences Building, Crown Street, Liverpool,, L69 7ZB, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Functional and Comparative Genomics, Institute of Integrative Biology, University of Liverpool, Biosciences Building, Crown Street, Liverpool L69 7ZB, UK. ashanmu@liv.ac.uk","institution_ids":["https://openalex.org/I146655781"]},{"raw_affiliation_string":"Department of Functional and Comparative Genomics, Institute of Integrative Biology, University of Liverpool, Biosciences Building, Crown Street, Liverpool,, L69 7ZB, UK","institution_ids":["https://openalex.org/I146655781"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018779412","display_name":"Faviel F. Gonz\u00e1lez-Galarza","orcid":"https://orcid.org/0000-0003-4233-313X"},"institutions":[{"id":"https://openalex.org/I146655781","display_name":"University of Liverpool","ror":"https://ror.org/04xs57h96","country_code":"GB","type":"education","lineage":["https://openalex.org/I146655781"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Faviel F. Gonzalez-Galarza","raw_affiliation_strings":["Department of Functional and Comparative Genomics, Institute of Integrative Biology, University of Liverpool, Biosciences Building, Crown Street, Liverpool L69 7ZB and","University of Liverpool, Liverpool, United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Functional and Comparative Genomics, Institute of Integrative Biology, University of Liverpool, Biosciences Building, Crown Street, Liverpool L69 7ZB and","institution_ids":["https://openalex.org/I146655781"]},{"raw_affiliation_string":"University of Liverpool, Liverpool, United Kingdom","institution_ids":["https://openalex.org/I146655781"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015318446","display_name":"Jonathan M. Wastling","orcid":"https://orcid.org/0000-0002-5894-4608"},"institutions":[{"id":"https://openalex.org/I146655781","display_name":"University of Liverpool","ror":"https://ror.org/04xs57h96","country_code":"GB","type":"education","lineage":["https://openalex.org/I146655781"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Jonathan M. Wastling","raw_affiliation_strings":["Department of Infection Biology, Institute of Infection and Global Health, University of Liverpool, Liverpool Science Park Innovation Centre 2, 146 Brownlow Hill, Liverpool L3 5RF, UK","University of Liverpool, Liverpool, United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Infection Biology, Institute of Infection and Global Health, University of Liverpool, Liverpool Science Park Innovation Centre 2, 146 Brownlow Hill, Liverpool L3 5RF, UK","institution_ids":["https://openalex.org/I146655781"]},{"raw_affiliation_string":"University of Liverpool, Liverpool, United Kingdom","institution_ids":["https://openalex.org/I146655781"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087181804","display_name":"Olga Vasieva","orcid":"https://orcid.org/0000-0001-6236-6452"},"institutions":[{"id":"https://openalex.org/I146655781","display_name":"University of Liverpool","ror":"https://ror.org/04xs57h96","country_code":"GB","type":"education","lineage":["https://openalex.org/I146655781"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Olga Vasieva","raw_affiliation_strings":["Department of Functional and Comparative Genomics, Institute of Integrative Biology, University of Liverpool, Biosciences Building, Crown Street, Liverpool L69 7ZB and","University of Liverpool, Liverpool, United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Functional and Comparative Genomics, Institute of Integrative Biology, University of Liverpool, Biosciences Building, Crown Street, Liverpool L69 7ZB and","institution_ids":["https://openalex.org/I146655781"]},{"raw_affiliation_string":"University of Liverpool, Liverpool, United Kingdom","institution_ids":["https://openalex.org/I146655781"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5073268875","display_name":"Andrew R. Jones","orcid":"https://orcid.org/0000-0001-6118-9327"},"institutions":[{"id":"https://openalex.org/I146655781","display_name":"University of Liverpool","ror":"https://ror.org/04xs57h96","country_code":"GB","type":"education","lineage":["https://openalex.org/I146655781"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Andrew R. Jones","raw_affiliation_strings":["Department of Functional and Comparative Genomics, Institute of Integrative Biology, University of Liverpool, Biosciences Building, Crown Street, Liverpool L69 7ZB and","University of Liverpool, Liverpool, United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Functional and Comparative Genomics, Institute of Integrative Biology, University of Liverpool, Biosciences Building, Crown Street, Liverpool L69 7ZB and","institution_ids":["https://openalex.org/I146655781"]},{"raw_affiliation_string":"University of Liverpool, Liverpool, United Kingdom","institution_ids":["https://openalex.org/I146655781"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I146655781"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":3.9723,"has_fulltext":true,"cited_by_count":69,"citation_normalized_percentile":{"value":0.94005634,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"41","issue":"D1","first_page":"D706","last_page":"D713"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11155","display_name":"Toxoplasma gondii Research Studies","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/2405","display_name":"Parasitology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11155","display_name":"Toxoplasma gondii Research Studies","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/2405","display_name":"Parasitology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10890","display_name":"Trypanosoma species research and implications","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11086","display_name":"Parasitic Infections and Diagnostics","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/2405","display_name":"Parasitology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.9328056573867798},{"id":"https://openalex.org/keywords/metabolic-pathway","display_name":"Metabolic pathway","score":0.6068823337554932},{"id":"https://openalex.org/keywords/apicomplexa","display_name":"Apicomplexa","score":0.4868564009666443},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.39909398555755615},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3944341838359833},{"id":"https://openalex.org/keywords/protozoal-disease","display_name":"Protozoal disease","score":0.23671984672546387},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.2049974799156189},{"id":"https://openalex.org/keywords/metabolism","display_name":"Metabolism","score":0.1817844808101654},{"id":"https://openalex.org/keywords/malaria","display_name":"Malaria","score":0.13077762722969055},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.10018220543861389}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.9328056573867798},{"id":"https://openalex.org/C192989942","wikidata":"https://www.wikidata.org/wiki/Q68685","display_name":"Metabolic pathway","level":3,"score":0.6068823337554932},{"id":"https://openalex.org/C2781023229","wikidata":"https://www.wikidata.org/wiki/Q193030","display_name":"Apicomplexa","level":4,"score":0.4868564009666443},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.39909398555755615},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3944341838359833},{"id":"https://openalex.org/C3019824283","wikidata":"https://www.wikidata.org/wiki/Q353172","display_name":"Protozoal disease","level":3,"score":0.23671984672546387},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.2049974799156189},{"id":"https://openalex.org/C62231903","wikidata":"https://www.wikidata.org/wiki/Q1057","display_name":"Metabolism","level":2,"score":0.1817844808101654},{"id":"https://openalex.org/C2778048844","wikidata":"https://www.wikidata.org/wiki/Q12156","display_name":"Malaria","level":2,"score":0.13077762722969055},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.10018220543861389},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D006790","descriptor_name":"Host-Parasite Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006790","descriptor_name":"Host-Parasite Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006790","descriptor_name":"Host-Parasite Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006790","descriptor_name":"Host-Parasite Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016782","descriptor_name":"Apicomplexa","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016782","descriptor_name":"Apicomplexa","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016782","descriptor_name":"Apicomplexa","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016782","descriptor_name":"Apicomplexa","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016782","descriptor_name":"Apicomplexa","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016782","descriptor_name":"Apicomplexa","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016782","descriptor_name":"Apicomplexa","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016782","descriptor_name":"Apicomplexa","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gks1139","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gks1139","pdf_url":"https://academic.oup.com/nar/article-pdf/41/D1/D706/18788268/gks1139.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:23193253","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23193253","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:eprints.keele.ac.uk:2298","is_oa":true,"landing_page_url":"http://eprints.keele.ac.uk/2298/1/Library%20of%20Apicomplexan%20Metabolic%20Pathways%3A%20a%20manually%20curated%20database%20for%20metabolic%20pathways%20of%20apicomplexan%20parasites.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S4306402149","display_name":"Keele Research Repository (Keele University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I56007636","host_organization_name":"Keele University","host_organization_lineage":["https://openalex.org/I56007636"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:europepmc.org:2590209","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3531055","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gks1139","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gks1139","pdf_url":"https://academic.oup.com/nar/article-pdf/41/D1/D706/18788268/gks1139.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G457983123","display_name":null,"funder_award_id":"BB/G010781/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G5727345831","display_name":null,"funder_award_id":"BB/I00095X/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G7330173492","display_name":"An Integrated Open Source Software Resource for Quantitative Proteomics","funder_award_id":"BB/I00095X/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G7491908206","display_name":"Developing proteome-bioinformatics methods for a large scale refinement of gene models in Apicomplexan parasites","funder_award_id":"BB/G010781/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320320323","display_name":"University of Liverpool","ror":"https://ror.org/04xs57h96"},{"id":"https://openalex.org/F4320332167","display_name":"Directorate for Biological Sciences","ror":"https://ror.org/001xhss06"},{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2002375963.pdf","grobid_xml":"https://content.openalex.org/works/W2002375963.grobid-xml"},"referenced_works_count":47,"referenced_works":["https://openalex.org/W1507241016","https://openalex.org/W1599773371","https://openalex.org/W1966394322","https://openalex.org/W1988628437","https://openalex.org/W1991716330","https://openalex.org/W1998767819","https://openalex.org/W2003947856","https://openalex.org/W2010332067","https://openalex.org/W2019851585","https://openalex.org/W2027308346","https://openalex.org/W2037843515","https://openalex.org/W2041430912","https://openalex.org/W2041654139","https://openalex.org/W2043355127","https://openalex.org/W2047817180","https://openalex.org/W2058372689","https://openalex.org/W2059383371","https://openalex.org/W2060000061","https://openalex.org/W2062905495","https://openalex.org/W2066492413","https://openalex.org/W2083280521","https://openalex.org/W2096608686","https://openalex.org/W2101477900","https://openalex.org/W2104245599","https://openalex.org/W2111973517","https://openalex.org/W2114671362","https://openalex.org/W2128601422","https://openalex.org/W2129895984","https://openalex.org/W2139915240","https://openalex.org/W2147533449","https://openalex.org/W2148621849","https://openalex.org/W2150864606","https://openalex.org/W2151383900","https://openalex.org/W2152972373","https://openalex.org/W2153452535","https://openalex.org/W2153913986","https://openalex.org/W2156522652","https://openalex.org/W2163916007","https://openalex.org/W2164267446","https://openalex.org/W2165943792","https://openalex.org/W2788073857","https://openalex.org/W4211099777","https://openalex.org/W4211140781","https://openalex.org/W4233060585","https://openalex.org/W4285719527","https://openalex.org/W4388253132","https://openalex.org/W6635935630"],"related_works":["https://openalex.org/W2082860237","https://openalex.org/W2119695867","https://openalex.org/W2130076355","https://openalex.org/W1990804418","https://openalex.org/W1993764875","https://openalex.org/W2046158694","https://openalex.org/W2788277189","https://openalex.org/W1971568933","https://openalex.org/W2013243191","https://openalex.org/W2117258802"],"abstract_inverted_index":{"The":[0],"Library":[1],"of":[2,26,31,41,55,65,132,147,162],"Apicomplexan":[3],"Metabolic":[4],"Pathways":[5],"(LAMP,":[6],"http://www.llamp.net)":[7],"is":[8],"a":[9,47,154,178,188],"web":[10],"database":[11,185],"that":[12],"provides":[13],"near":[14],"complete":[15],"mapping":[16],"from":[17,103,120],"genes":[18,80],"to":[19,84,117,136,156,169],"the":[20,27,32,38,62,109,121,145,158,167,172,175,197],"central":[21],"metabolic":[22,76,160],"functions":[23,85,101],"for":[24,88,112,177,191],"some":[25],"prominent":[28],"intracellular":[29],"parasites":[30],"phylum":[33,36],"Apicomplexa.":[34,198],"This":[35],"includes":[37],"causative":[39],"agents":[40],"malaria,":[42],"toxoplasmosis":[43],"and":[44,50,94,97,139,193],"theileriosis-diseases":[45],"with":[46,141],"huge":[48],"economic":[49],"social":[51],"impact.":[52],"A":[53],"number":[54],"apicomplexan":[56],"genomes":[57],"have":[58,71,105,151],"been":[59,106],"sequenced,":[60],"but":[61],"accurate":[63],"annotation":[64],"gene":[66,111],"function":[67],"remains":[68],"challenging.":[69],"We":[70,150,181],"adopted":[72],"an":[73,113],"approach":[74],"called":[75],"reconstruction,":[77],"in":[78],"which":[79],"are":[81],"systematically":[82],"assigned":[83],"within":[86],"pathways/networks":[87],"Toxoplasma":[89],"gondii,":[90],"Neospora":[91],"caninum,":[92],"Cryptosporidium":[93],"Theileria":[95],"species,":[96,127,164],"Babesia":[98],"bovis.":[99],"Several":[100],"missing":[102],"pathways":[104],"identified,":[107],"where":[108],"corresponding":[110],"essential":[114],"process":[115],"appears":[116],"be":[118],"absent":[119],"current":[122],"genome":[123],"annotation.":[124],"For":[125],"each":[126,133,163],"LAMP":[128],"contains":[129],"interactive":[130],"diagrams":[131],"pathway,":[134],"hyperlinked":[135],"external":[137],"resources":[138],"annotated":[140],"detailed":[142],"information,":[143],"including":[144],"sources":[146],"evidence":[148],"used.":[149],"also":[152],"developed":[153],"section":[155],"highlight":[157],"overall":[159],"capabilities":[161],"such":[165],"as":[166],"ability":[168],"synthesize":[170],"or":[171],"dependence":[173],"on":[174,196],"host":[176],"particular":[179],"metabolite.":[180],"expect":[182],"this":[183],"new":[184],"will":[186],"become":[187],"valuable":[189],"resource":[190],"fundamental":[192],"applied":[194],"research":[195]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":10},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":8},{"year":2018,"cited_by_count":6},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":10},{"year":2013,"cited_by_count":5}],"updated_date":"2026-06-26T08:34:08.712188","created_date":"2025-10-10T00:00:00"}
