{"id":"https://openalex.org/W2090146405","doi":"https://doi.org/10.1093/nar/gks1080","title":"dcGO: database of domain-centric ontologies on functions, phenotypes, diseases and more","display_name":"dcGO: database of domain-centric ontologies on functions, phenotypes, diseases and more","publication_year":2012,"publication_date":"2012-11-17","ids":{"openalex":"https://openalex.org/W2090146405","doi":"https://doi.org/10.1093/nar/gks1080","mag":"2090146405","pmid":"https://pubmed.ncbi.nlm.nih.gov/23161684"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gks1080","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gks1080","pdf_url":"https://academic.oup.com/nar/article-pdf/41/D1/D536/18786543/gks1080.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/41/D1/D536/18786543/gks1080.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5015356302","display_name":"Hai Fang","orcid":"https://orcid.org/0000-0003-3961-8572"},"institutions":[{"id":"https://openalex.org/I36234482","display_name":"University of Bristol","ror":"https://ror.org/0524sp257","country_code":"GB","type":"education","lineage":["https://openalex.org/I36234482"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Hai Fang","raw_affiliation_strings":["Department of Computer Science, University of Bristol, The Merchant Venturers Building, Bristol BS8 1UB, UK. hfang@cs.bris.ac.uk","Department of Computer Science, University of Bristol, The Merchant Venturers Building,Bristol BS8 1UB,UK"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Bristol, The Merchant Venturers Building, Bristol BS8 1UB, UK. hfang@cs.bris.ac.uk","institution_ids":["https://openalex.org/I36234482"]},{"raw_affiliation_string":"Department of Computer Science, University of Bristol, The Merchant Venturers Building,Bristol BS8 1UB,UK","institution_ids":["https://openalex.org/I36234482"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5064008781","display_name":"Julian Gough","orcid":"https://orcid.org/0000-0002-1965-4982"},"institutions":[{"id":"https://openalex.org/I36234482","display_name":"University of Bristol","ror":"https://ror.org/0524sp257","country_code":"GB","type":"education","lineage":["https://openalex.org/I36234482"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Julian Gough","raw_affiliation_strings":["Department of Computer Science, University of Bristol, The Merchant Venturers Building,Bristol BS8 1UB,UK"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Bristol, The Merchant Venturers Building,Bristol BS8 1UB,UK","institution_ids":["https://openalex.org/I36234482"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5015356302"],"corresponding_institution_ids":["https://openalex.org/I36234482"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":4.0337,"has_fulltext":false,"cited_by_count":133,"citation_normalized_percentile":{"value":0.94741448,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"41","issue":"D1","first_page":"D536","last_page":"D544"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9896000027656555,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.748197078704834},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6139207482337952},{"id":"https://openalex.org/keywords/ontology-components","display_name":"Ontology components","score":0.6064494848251343},{"id":"https://openalex.org/keywords/idef5","display_name":"IDEF5","score":0.5601868629455566},{"id":"https://openalex.org/keywords/drugbank","display_name":"DrugBank","score":0.5466012954711914},{"id":"https://openalex.org/keywords/open-biomedical-ontologies","display_name":"Open Biomedical Ontologies","score":0.5221593379974365},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.49568259716033936},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.48848092555999756},{"id":"https://openalex.org/keywords/protein-domain","display_name":"Protein domain","score":0.4867951571941376},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.472128689289093},{"id":"https://openalex.org/keywords/uniprot","display_name":"UniProt","score":0.4325897693634033},{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.4236564338207245},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.41864702105522156},{"id":"https://openalex.org/keywords/process-ontology","display_name":"Process ontology","score":0.3804469108581543},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3353808522224426},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.32719117403030396},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.2771119773387909},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2571982145309448},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.2402358055114746},{"id":"https://openalex.org/keywords/suggested-upper-merged-ontology","display_name":"Suggested Upper Merged Ontology","score":0.2069942057132721},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.10636717081069946}],"concepts":[{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.748197078704834},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6139207482337952},{"id":"https://openalex.org/C154210476","wikidata":"https://www.wikidata.org/wiki/Q7095057","display_name":"Ontology components","level":5,"score":0.6064494848251343},{"id":"https://openalex.org/C118248724","wikidata":"https://www.wikidata.org/wiki/Q5969997","display_name":"IDEF5","level":4,"score":0.5601868629455566},{"id":"https://openalex.org/C155261790","wikidata":"https://www.wikidata.org/wiki/Q1122544","display_name":"DrugBank","level":3,"score":0.5466012954711914},{"id":"https://openalex.org/C137982476","wikidata":"https://www.wikidata.org/wiki/Q7072326","display_name":"Open Biomedical Ontologies","level":5,"score":0.5221593379974365},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.49568259716033936},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.48848092555999756},{"id":"https://openalex.org/C144292202","wikidata":"https://www.wikidata.org/wiki/Q898273","display_name":"Protein domain","level":3,"score":0.4867951571941376},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.472128689289093},{"id":"https://openalex.org/C202264299","wikidata":"https://www.wikidata.org/wiki/Q905695","display_name":"UniProt","level":3,"score":0.4325897693634033},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.4236564338207245},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.41864702105522156},{"id":"https://openalex.org/C137003198","wikidata":"https://www.wikidata.org/wiki/Q7247296","display_name":"Process ontology","level":3,"score":0.3804469108581543},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3353808522224426},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.32719117403030396},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.2771119773387909},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2571982145309448},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2402358055114746},{"id":"https://openalex.org/C50971890","wikidata":"https://www.wikidata.org/wiki/Q7635093","display_name":"Suggested Upper Merged Ontology","level":4,"score":0.2069942057132721},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.10636717081069946},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.0},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/nar/gks1080","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gks1080","pdf_url":"https://academic.oup.com/nar/article-pdf/41/D1/D536/18786543/gks1080.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:23161684","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23161684","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:research-information.bris.ac.uk:openaire_cris_publications/35e70718-0cdb-4d4d-945a-8eccdc7d8d61","is_oa":false,"landing_page_url":"https://research-information.bris.ac.uk/en/publications/35e70718-0cdb-4d4d-945a-8eccdc7d8d61","pdf_url":null,"source":{"id":"https://openalex.org/S7407055359","display_name":"Explore Bristol Research","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Fang, H & Gough, J 2013, 'dcGO: database of domain-centric ontologies on functions, phenotypes, diseases and more', Nucleic Acids Research, vol. 41, no. Database issue, pp. D536-44. https://doi.org/10.1093/nar/gks1080","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.807.3125","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.807.3125","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/cf/02/gks1080.PMC3531119.pdf","raw_type":"text"},{"id":"pmh:oai:europepmc.org:2590240","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3531119","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gks1080","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gks1080","pdf_url":"https://academic.oup.com/nar/article-pdf/41/D1/D536/18786543/gks1080.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1805818001","display_name":null,"funder_award_id":"BB/G022771/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2090146405.pdf","grobid_xml":"https://content.openalex.org/works/W2090146405.grobid-xml"},"referenced_works_count":35,"referenced_works":["https://openalex.org/W1970629860","https://openalex.org/W1985512202","https://openalex.org/W1989127872","https://openalex.org/W2006205370","https://openalex.org/W2006779861","https://openalex.org/W2010798628","https://openalex.org/W2022451103","https://openalex.org/W2025855398","https://openalex.org/W2048024098","https://openalex.org/W2096939566","https://openalex.org/W2099946731","https://openalex.org/W2102856132","https://openalex.org/W2103017472","https://openalex.org/W2104295259","https://openalex.org/W2113142309","https://openalex.org/W2116398954","https://openalex.org/W2119027485","https://openalex.org/W2120428260","https://openalex.org/W2124922304","https://openalex.org/W2128653811","https://openalex.org/W2136410628","https://openalex.org/W2137052779","https://openalex.org/W2141885858","https://openalex.org/W2144363281","https://openalex.org/W2146495783","https://openalex.org/W2147834895","https://openalex.org/W2150233912","https://openalex.org/W2151946481","https://openalex.org/W2152889283","https://openalex.org/W2159092541","https://openalex.org/W2161062388","https://openalex.org/W2171681733","https://openalex.org/W4233334497","https://openalex.org/W4243460074","https://openalex.org/W4320301318"],"related_works":["https://openalex.org/W2942194862","https://openalex.org/W1801798365","https://openalex.org/W4290780032","https://openalex.org/W991275336","https://openalex.org/W1494571806","https://openalex.org/W618046730","https://openalex.org/W2399216429","https://openalex.org/W1508812357","https://openalex.org/W2125569773","https://openalex.org/W2957827085"],"abstract_inverted_index":{"We":[0],"present":[1],"'dcGO'":[2],"(http://supfam.org/SUPERFAMILY/dcGO),":[3],"a":[4],"comprehensive":[5],"ontology":[6,113,130],"database":[7,183],"for":[8,141],"protein":[9,49],"domains.":[10,39],"Domains":[11],"are":[12,87],"often":[13],"the":[14,52,91,95,100,152],"functional":[15,58],"units":[16,59],"of":[17,21,61,81,93,164,173,176],"proteins,":[18,28,159],"thus":[19],"instead":[20],"associating":[22],"ontological":[23,46,76,136,153],"terms":[24,36,47,77,137,154],"only":[25],"with":[26,37,79],"full-length":[27],"it":[29],"sometimes":[30],"makes":[31],"more":[32,62],"sense":[33],"to":[34,146,148,158],"associate":[35],"individual":[38],"Domain-centric":[40],"GO,":[41],"'dcGO',":[42],"provides":[43,190],"associations":[44,147],"between":[45,73],"and":[48,54,84,114,131,150,178,187,196],"domains":[50,149],"at":[51,70],"superfamily":[53],"family":[55],"levels.":[56],"Some":[57],"consist":[60],"than":[63],"one":[64],"domain":[65],"acting":[66,69],"together":[67],"or":[68],"an":[71],"interface":[72],"domains;":[74],"therefore,":[75],"associated":[78],"pairs":[80],"domains,":[82],"triplets":[83],"longer":[85],"supra-domains":[86],"also":[88],"provided.":[89],"At":[90],"time":[92],"writing":[94],"ontologies":[96,116,124],"in":[97],"dcGO":[98,182],"include":[99],"Gene":[101],"Ontology":[102],"(GO);":[103],"Enzyme":[104],"Commission":[105],"(EC)":[106],"numbers;":[107],"pathways":[108],"from":[109,117,125,133],"UniPathway;":[110],"human":[111,128],"phenotype":[112,115],"five":[118],"model":[119],"organisms,":[120],"including":[121],"plants;":[122],"anatomy":[123],"three":[126],"organisms;":[127],"disease":[129],"drugs":[132],"DrugBank.":[134],"All":[135],"have":[138,155],"probabilistic":[139],"scores":[140],"their":[142],"associations.":[143],"In":[144],"addition":[145],"supra-domains,":[151],"been":[156],"transferred":[157],"through":[160],"homology,":[161],"providing":[162],"annotations":[163],">80":[165],"million":[166],"sequences":[167],"covering":[168],"2414":[169],"complete":[170],"genomes,":[171],"hundreds":[172],"meta-genomes,":[174],"thousands":[175],"viruses":[177],"so":[179],"forth.":[180],"The":[181],"is":[184],"updated":[185],"fortnightly,":[186],"its":[188],"website":[189],"downloads,":[191],"search,":[192],"browse,":[193],"phylogenetic":[194],"context":[195],"other":[197],"data-mining":[198],"facilities.":[199]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":7},{"year":2024,"cited_by_count":10},{"year":2023,"cited_by_count":9},{"year":2022,"cited_by_count":19},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":14},{"year":2019,"cited_by_count":7},{"year":2018,"cited_by_count":12},{"year":2017,"cited_by_count":9},{"year":2016,"cited_by_count":10},{"year":2015,"cited_by_count":14},{"year":2014,"cited_by_count":7},{"year":2013,"cited_by_count":8},{"year":2012,"cited_by_count":1}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
